CN187014

Overview
NameCN187014
Unique NameCN187014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187014 vs. ExPASy Swiss-Prot
Match: DNAJ_NITEC (Chaperone protein dnaJ OS=Nitrosomonas eutropha (strain C91) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12
Identity = 36/68 (52.94%), Postives = 49/68 (72.06%), Query Frame = 1
Query:   55 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKC--RFQQIQEAYSVLSDENKRSMYD 252
            YY +LG+ +DA  S+++  Y KLAMK+HPDR+      AG+AK   RF++I+EAY VLSD NKR+ YD
Sbjct:    6 YYEVLGVGRDADESELKKVYRKLAMKYHPDRN------AGDAKAEERFKEIKEAYEVLSDSNKRAAYD 67          
BLAST of CN187014 vs. ExPASy Swiss-Prot
Match: DNAJ_METSS (Chaperone protein dnaJ OS=Methylovorus sp. (strain SS1 / DSM 11726) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 1
Query:   55 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 252
            YY +LG+ +DAS  +I+ +Y KLAMK+HPDR+  NP    +A+  F++ +EAY VLSDE KR+ YD
Sbjct:    6 YYEVLGVNRDASDEEIKKSYRKLAMKYHPDRNPDNP----KAEESFKEAKEAYEVLSDEQKRAAYD 67          
BLAST of CN187014 vs. ExPASy Swiss-Prot
Match: DNAJ_HALOH (Chaperone protein dnaJ OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12
Identity = 37/96 (38.54%), Postives = 59/96 (61.46%), Query Frame = 1
Query:   55 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQEMVSMMNNVKD 342
            YY ILG+ +DA   +I+ AY +LA K+HPD +  +P    +A+ +F++I EAY +LSD +KR+ YD   +  + EED +F  F Q      +++ D
Sbjct:    7 YYEILGVSRDADQKEIKKAYRRLARKYHPDINKDDP----DAEEKFKEISEAYEILSDPDKRARYDQYGHAGINEEDFNFEDFAQRGFGGFDDIFD 98          
BLAST of CN187014 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBY (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AYE) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 1
Query:   55 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 252
            YY +LG+ K AS  +I+ AY KLAMK+HPDR+  N     EA+ +F++  EAY +LSD  KRSMYD
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDN----AEAEEKFKEASEAYEILSDSEKRSMYD 67          
BLAST of CN187014 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBT (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 1
Query:   55 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 252
            YY +LG+ K AS  +I+ AY KLAMK+HPDR+  N     EA+ +F++  EAY +LSD  KRSMYD
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDN----AEAEEKFKEASEAYEILSDSEKRSMYD 67          
BLAST of CN187014 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBS (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain SDF) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 1
Query:   55 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 252
            YY +LG+ K AS  +I+ AY KLAMK+HPDR+  N     EA+ +F++  EAY +LSD  KRSMYD
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDN----AEAEEKFKEASEAYEILSDSEKRSMYD 67          
BLAST of CN187014 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBC (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ACICU) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 1
Query:   55 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 252
            YY +LG+ K AS  +I+ AY KLAMK+HPDR+  N     EA+ +F++  EAY +LSD  KRSMYD
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDN----AEAEEKFKEASEAYEILSDSEKRSMYD 67          
BLAST of CN187014 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB5 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB0057) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 1
Query:   55 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 252
            YY +LG+ K AS  +I+ AY KLAMK+HPDR+  N     EA+ +F++  EAY +LSD  KRSMYD
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDN----AEAEEKFKEASEAYEILSDSEKRSMYD 67          
BLAST of CN187014 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB3 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB307-0294) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 1
Query:   55 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 252
            YY +LG+ K AS  +I+ AY KLAMK+HPDR+  N     EA+ +F++  EAY +LSD  KRSMYD
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDN----AEAEEKFKEASEAYEILSDSEKRSMYD 67          
BLAST of CN187014 vs. ExPASy Swiss-Prot
Match: DNAJ_DELAS (Chaperone protein dnaJ OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 43/105 (40.95%), Postives = 66/105 (62.86%), Query Frame = 1
Query:   55 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD----AGLYDP---LEEEDEDFYGFVQEMVSMMNNVKDEG 348
            +Y +LG+ K+AS  DI+ AY KLAMK+HPDR+  +   A EA+ +F++ +EAY +LSD NKR+ YD    AG+ DP   +    E F GF +    +  ++ ++G
Sbjct:    6 FYEVLGVAKNASDDDIKKAYRKLAMKYHPDRNQGD--AAREAEEKFKEAKEAYEMLSDSNKRAAYDQYGHAGV-DPNRGMGGGAEGFGGFAEAFGDIFGDMFNQG 107          
The following BLAST results are available for this feature:
BLAST of CN187014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
DNAJ_NITEC1.565e-1252.94Chaperone protein dnaJ OS=Nitrosomonas eutropha (s... [more]
DNAJ_METSS1.565e-1251.52Chaperone protein dnaJ OS=Methylovorus sp. (strain... [more]
DNAJ_HALOH1.565e-1238.54Chaperone protein dnaJ OS=Halothermothrix orenii (... [more]
DNAJ_ACIBY1.565e-1253.03Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBT1.565e-1253.03Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBS1.565e-1253.03Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBC1.565e-1253.03Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB51.565e-1253.03Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB31.565e-1253.03Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_DELAS2.044e-1240.95Chaperone protein dnaJ OS=Delftia acidovorans (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003M16_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003M16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187014 ID=CN187014; Name=CN187014; organism=Citrus sinensis; type=EST; length=707bp
TTTTTTGGTGCTGTGATGGATGGAGGAGGAGGATCCAACGGCGGATCTTT
GAGCTACTACGCGATTCTTGGGATTCGCAAGGACGCCTCCTTCTCTGACA
TTCGCTCCGCTTATCACAAGCTCGCCATGAAATGGCATCCGGATAGGAGT
GCGAAGAACCCGGGAGTGGCCGGGGAAGCCAAATGCCGGTTTCAGCAAAT
TCAAGAAGCTTACTCCGTCCTCTCTGATGAGAACAAGAGGTCAATGTACG
ATGCTGGACTCTATGATCCCCTTGAGGAAGAAGATGAGGACTTCTATGGT
TTTGTGCAAGAGATGGTCTCCATGATGAATAATGTTAAAGACGAGGGGGA
CAGTTTTGAGGACCTCCAAAGGATGTTCGTGGAAATGGTGGATGGGATGA
GCTTCGACTTTAATTATGATCCTACGGACGCGCAAAGAGCATGTGTCAAC
ACATCAAAGGGTAAAGCGGCCAAGCGCGGTACTTCTCGTTGCTGACAATC
GCTCTGGATCATCTCTGATCATTCAAGCTAATGATGATGTTGTTGATCAA
TTCCCCCCATTTTGTTCTAATCTTCAAATTAATCCCTTATGTTGGGGGTG
GGTAGTTTAAGAATTTTTTTTTTTTTTAAATCTCGGGGGTGTTAGCATTT
GGACCGTGATATTTTCTTTATAAATAAAATCTCTTTTATTTAAAAAAAAA
AAAAAAA
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