CK936874
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK936874 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.096e-20 Identity = 50/94 (53.19%), Postives = 58/94 (61.70%), Query Frame = 3 Query: 138 AITCGQVTGSLAPCIAFLRTGGRFPPPP-CCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLSRQCGVSIPYKISPNTDCSRVR 416 AI+ QV SL PC+ ++R P PP C G+RSL AAR DRQAAC C+K I IN VAAGL QC V IPYKISP+ DC RV+ Sbjct: 27 AISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of CK936874 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.349e-20 Identity = 47/93 (50.54%), Postives = 62/93 (66.67%), Query Frame = 3 Query: 138 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPG-INANVAAGLSRQCGVSIPYKISPNTDCSRV 413 AITCGQV+ +L PC A+ + G P CC+GV+ L G AR+T D+QA C CLK S+ G NA AAG+ +CGVS+PY IS + DCS++ Sbjct: 26 AITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLK----SVAGAYNAGRAAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of CK936874 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.987e-20 Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 3 Query: 138 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLSRQCGVSIPYKISPNTDCSRV 413 A+ CGQV + PC+ +++ GG P CCNGVR L+ A+++ DRQ CNCLK R I +N N AA + +C V++PY ISP+ DCSR+ Sbjct: 26 ALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of CK936874 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.556e-19 Identity = 52/100 (52.00%), Postives = 67/100 (67.00%), Query Frame = 3 Query: 126 PVT-NAI-TCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSI-PGINANVAAGLSRQCGVSIPYKISPNTDCSRVR 416 P+T NA+ +CG V G+LA CIA+L G CCNGV +L A TTPDRQ AC CL+ A +++ PG+N AAGL C V+IPYKIS +T+C+ VR Sbjct: 20 PITANALMSCGTVNGNLAGCIAYLTRGAPLTQG-CCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of CK936874 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.725e-19 Identity = 45/96 (46.88%), Postives = 59/96 (61.46%), Query Frame = 3 Query: 126 PVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLSRQCGVSIPYKISPNTDCSRV 413 P + I CG VT +LA C+ +L G P CC GV+SL A+TTPDR+ C CLK A + I G+N ++ A L CGVSIPY IS +T+C + Sbjct: 21 PTESTIQCGTVTSTLAQCLTYLTNSGPLPSQ-CCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of CK936874 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.935e-18 Identity = 39/92 (42.39%), Postives = 60/92 (65.22%), Query Frame = 3 Query: 138 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLSRQCGVSIPYKISPNTDCSRV 413 A++CG VT S+APC++++ P CC+GVR+LNG A ++ DR+ AC+CLK S +N AA + +CGVS+ + IS + DCS++ Sbjct: 29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CK936874 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.935e-18 Identity = 39/92 (42.39%), Postives = 60/92 (65.22%), Query Frame = 3 Query: 138 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLSRQCGVSIPYKISPNTDCSRV 413 A++CG VT S+APC++++ P CC+GVR+LNG A ++ DR+ AC+CLK S +N AA + +CGVS+ + IS + DCS++ Sbjct: 29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CK936874 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 3.834e-18 Identity = 43/92 (46.74%), Postives = 61/92 (66.30%), Query Frame = 3 Query: 138 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLSRQCGVSIPYKISPNTDCSRV 413 AI CG V + PC+++++ GG P CC+GV++L+ AR+ DRQ+ACNCLK R I +N + A + +CGV++PY IS N DCSRV Sbjct: 23 AIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of CK936874 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.903e-17 Identity = 44/92 (47.83%), Postives = 54/92 (58.70%), Query Frame = 3 Query: 138 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLSRQCGVSIPYKISPNTDCSRV 413 AI C QV LA C+ +L+ GG P P CCNG+ SL AA DRQ ACNCLK +IPGIN + A L +CGV+I S DC+ + Sbjct: 28 AIACPQVNMYLAQCLPYLKAGGN-PSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118
BLAST of CK936874 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.536e-17 Identity = 48/94 (51.06%), Postives = 59/94 (62.77%), Query Frame = 3 Query: 138 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPG-INANVAAGLSRQCGVSIPYKISPNTDCSRVR 416 AI+CG VTGSL C +L GG F P CC+GV+ LN ARTT DRQ AC C++ A R++ +NA AA L C V I Y IS T+C+ VR Sbjct: 26 AISCGAVTGSLGQCYNYLTRGG-FIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISYPISARTNCNTVR 118 The following BLAST results are available for this feature:
BLAST of CK936874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936874 ID=CK936874; Name=CK936874; organism=Citrus sinensis; type=EST; length=672bpback to top |