CK936872

Overview
NameCK936872
Unique NameCK936872
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936872 vs. ExPASy Swiss-Prot
Match: MAO3_BACSU (Probable NAD-dependent malic enzyme 3 OS=Bacillus subtilis GN=malS PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.538e-25
Identity = 62/144 (43.06%), Postives = 88/144 (61.11%), Query Frame = 2
Query:  221 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERS--IQVIVVTDGERI 646
            G  +L  P  NKG+AFTE+ER    L+G LPP V++   Q K+           L K V +  L +RNE LFY+LL D++ E+LP+VYTPTVG A Q+Y   +R+P+GLY+S+ +   + E  K + ++S  I +IV TD E I
Sbjct:   18 GLEVLSVPFLNKGVAFTEEERKELGLKGFLPPKVLTIDDQAKRAYEQYSAQPDDLSKNVYLTALHDRNETLFYRLLNDHLGEMLPIVYTPTVGTAIQRYSHEYRKPRGLYLSIDDPDGMKEAFKQYKDQSDTIDLIVATDAEGI 161          

HSP 2 Score: 21.557 bits (44), Expect = 5.538e-25
Identity = 10/26 (38.46%), Postives = 12/26 (46.15%), Query Frame = 1
Query:  658 GSWLSGDGNFLLGNWLLYTALGGIRP 735
            G W  G     +G   +YTA  GI P
Sbjct:  165 GDWGVGGIAISIGKLAVYTAAAGIDP 190          
BLAST of CK936872 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAE (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa GN=sfcA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.538e-25
Identity = 51/143 (35.66%), Postives = 96/143 (67.13%), Query Frame = 2
Query:  218 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERI 646
            +G  LL  P  NKG AF+ +ER    L+GLLP  + + + Q ++  +        L +++ +  +++ NE LF++LL +++EE++P++YTPTVG+ACQ++  I+R  +GL+IS  ++ +I ++L++  + +++++VVTD ERI
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRTHRGLFISYPDRERIDDILRSATKNNVKIVVVTDSERI 156          

HSP 2 Score: 21.9422 bits (45), Expect = 5.538e-25
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 1
Query:  691 LGNWLLYTALGGIRP 735
            +G   LYTA GGI P
Sbjct:  171 IGKLSLYTACGGISP 185          
BLAST of CK936872 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAB (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=sfcA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.538e-25
Identity = 51/143 (35.66%), Postives = 96/143 (67.13%), Query Frame = 2
Query:  218 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERI 646
            +G  LL  P  NKG AF+ +ER    L+GLLP  + + + Q ++  +        L +++ +  +++ NE LF++LL +++EE++P++YTPTVG+ACQ++  I+R  +GL+IS  ++ +I ++L++  + +++++VVTD ERI
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRTHRGLFISYPDRERIDDILRSATKNNVKIVVVTDSERI 156          

HSP 2 Score: 21.9422 bits (45), Expect = 5.538e-25
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 1
Query:  691 LGNWLLYTALGGIRP 735
            +G   LYTA GGI P
Sbjct:  171 IGKLSLYTACGGISP 185          
BLAST of CK936872 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA8 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain LESB58) GN=sfcA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.538e-25
Identity = 51/143 (35.66%), Postives = 96/143 (67.13%), Query Frame = 2
Query:  218 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERI 646
            +G  LL  P  NKG AF+ +ER    L+GLLP  + + + Q ++  +        L +++ +  +++ NE LF++LL +++EE++P++YTPTVG+ACQ++  I+R  +GL+IS  ++ +I ++L++  + +++++VVTD ERI
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRTHRGLFISYPDRERIDDILRSATKNNVKIVVVTDSERI 156          

HSP 2 Score: 21.9422 bits (45), Expect = 5.538e-25
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 1
Query:  691 LGNWLLYTALGGIRP 735
            +G   LYTA GGI P
Sbjct:  171 IGKLSLYTACGGISP 185          
BLAST of CK936872 vs. ExPASy Swiss-Prot
Match: MAO2_BACSU (Probable NAD-dependent malic enzyme 2 OS=Bacillus subtilis GN=maeA PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.588e-24
Identity = 61/141 (43.26%), Postives = 86/141 (60.99%), Query Frame = 2
Query:  230 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERS--IQVIVVTDGERI 646
            +L  P  NKG+AF+ +ER    L GLLPP V+S   Q ++     +     L++ V + +L  RNE LFYKLL +++ E+LPVVYTPTVGEA Q+Y   +RRPQG+Y+S+     I +  +N    +  I +IV TD E I
Sbjct:   38 VLSIPTLNKGVAFSLEERQELGLEGLLPPTVLSLDQQAQRAYEQFQAQPDRLRQNVYLSDLANRNEVLFYKLLKNHLREMLPVVYTPTVGEAIQEYSHEYRRPQGIYLSIDNIDGIEKAFENLHATAGDIDLIVATDSESI 178          

HSP 2 Score: 25.0238 bits (53), Expect = 1.588e-24
Identity = 11/26 (42.31%), Postives = 13/26 (50.00%), Query Frame = 1
Query:  658 GSWLSGDGNFLLGNWLLYTALGGIRP 735
            G W  G  N  +G   +YTA  GI P
Sbjct:  182 GDWGVGGINIAIGKLAVYTAAAGIDP 207          
BLAST of CK936872 vs. ExPASy Swiss-Prot
Match: MAOX_MYCTU (Putative malate oxidoreductase [NAD] OS=Mycobacterium tuberculosis GN=mez PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.693e-19
Identity = 51/141 (36.17%), Postives = 83/141 (58.87%), Query Frame = 2
Query:  233 LRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKN---WPERSIQVIVVTDGERI 646
            L  P  N+G+ FT  +R    L G LP AV++   Q +++ + ++     L + + + +L  R+E L++K+L D++ EL+PVVYTPTVGEA Q++   +R  +GL++S+ E  +I E        PE  + +IV TD E I
Sbjct:   13 LSAPSLNRGVGFTHAQRRRLGLTGRLPSAVLTLDQQAERVWHQLQSLATELGRNLLLEQLHYRHEVLYFKVLADHLPELMPVVYTPTVGEAIQRFSDEYRGQRGLFLSIDEPDEIEEAFNTLGLGPE-DVDLIVCTDAEAI 152          

HSP 2 Score: 24.2534 bits (51), Expect = 1.693e-19
Identity = 11/26 (42.31%), Postives = 13/26 (50.00%), Query Frame = 1
Query:  658 GSWLSGDGNFLLGNWLLYTALGGIRP 735
            G W  G     +G   LYTA GG+ P
Sbjct:  156 GDWGVGGIQIAVGKLALYTAGGGVDP 181          
BLAST of CK936872 vs. ExPASy Swiss-Prot
Match: MAOM_YEAST (NAD-dependent malic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=MAE1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.512e-18
Identity = 50/140 (35.71%), Postives = 81/140 (57.86%), Query Frame = 2
Query:  230 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNW-PERSIQVIVVTDGERI 646
            LL  P  NKG AFT++ER+A  L  LLPP V +   Q ++    +   + PL K   M  L  +N+ L++ L+  +++EL+P++YTPT G+A   Y   FR+P+G+++ + E   I   L  +  ++ +  IVV+D E I
Sbjct:  103 LLNSPLFNKGSAFTQEEREAFNLEALLPPQVNTLDEQLERSYKQLCYLKTPLAKNDFMTSLRVQNKVLYFALIRRHIKELVPIIYTPTEGDAIAAYSHRFRKPEGVFLDITEPDSIECRLATYGGDKDVDYIVVSDSEGI 242          
BLAST of CK936872 vs. ExPASy Swiss-Prot
Match: MAOX_SCHPO (NAD-dependent malic enzyme OS=Schizosaccharomyces pombe GN=mae2 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.696e-18
Identity = 52/161 (32.30%), Postives = 90/161 (55.90%), Query Frame = 2
Query:  176 TEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQY-EVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISL--KEKGKILEVLKNWPER-SIQVIVVTDGERI 646
            T++Q+  P       G  LL  PR+NK  AFT +ER    +   LPP V + Q Q  +  +  +   + PLQK + + +L   N+ LFY L+  ++ E++P++YTPT G+A +++  I+R P+G Y+ +   +   I + L  + +  S++ I++TD E I
Sbjct:    5 TKEQIECP-----LKGVTLLNSPRYNKDTAFTPEERQKFEISSRLPPIVETLQQQVDRCYDQYKAIGDEPLQKNLYLSQLSVTNQTLFYALISQHLIEMIPIIYTPTEGDAIKQFSDIYRYPEGCYLDIDHNDLSYIKQQLSEFGKSDSVEYIIITDSEGI 160          
BLAST of CK936872 vs. ExPASy Swiss-Prot
Match: MLES_OENOE (Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.239e-17
Identity = 53/141 (37.59%), Postives = 76/141 (53.90%), Query Frame = 2
Query:  230 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQG-LYISLKEKGKILEVLKNWPE-RSIQVIVVTDGERI 646
            +L DP  NKG AFTE ER+   L GLLP  V + Q Q  +     +     L+K + +ME+   N  LFYKL   +V E +P+VY PT+ +  + Y  +F  PQG  ++ +     I   LKN    R I+++VV+D E I
Sbjct:    7 ILNDPFINKGTAFTEAEREELGLNGLLPAKVQALQEQVDQTYAQFQSKVSNLEKRLFLMEIFNTNHVLFYKLFSQHVVEFMPIVYDPTIADTIENYSELFVEPQGAAFLDINHPENIQSTLKNAANGRDIKLLVVSDAEGI 147          
BLAST of CK936872 vs. ExPASy Swiss-Prot
Match: MLES_LACLA (Malolactic enzyme OS=Lactococcus lactis subsp. lactis GN=mleS PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.232e-17
Identity = 54/141 (38.30%), Postives = 74/141 (52.48%), Query Frame = 2
Query:  230 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQ-GLYISLKEKGKILEVLKNWP-ERSIQVIVVTDGERI 646
            +L +P  NKG AFT KER    L GLLPP V + + Q ++           L+K   +ME+   N  LFY L   ++ E  PVVY PT+ +  + Y  +F  PQ   Y+ +     I E LKN   +R I++IVVTD E I
Sbjct:    6 ILNNPFLNKGTAFTMKERQELGLIGLLPPTVQTIEEQAEQTYEQYLTKPSDLEKRHFLMEIFNTNRTLFYYLFNKHIVEFNPVVYDPTIADTIENYSHLFVDPQYAAYLDINHPENITETLKNAAGDREIRLIVVTDAEGI 146          

HSP 2 Score: 22.3274 bits (46), Expect = 3.232e-17
Identity = 9/26 (34.62%), Postives = 14/26 (53.85%), Query Frame = 1
Query:  658 GSWLSGDGNFLLGNWLLYTALGGIRP 735
            G W +   +  +G  ++YTA  GI P
Sbjct:  150 GDWGTQGVDISVGKLMIYTAAAGIDP 175          
The following BLAST results are available for this feature:
BLAST of CK936872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO3_BACSU5.538e-2543.06Probable NAD-dependent malic enzyme 3 OS=Bacillus ... [more]
MAO1_PSEAE5.538e-2535.66NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEAB5.538e-2535.66NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEA85.538e-2535.66NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO2_BACSU1.588e-2443.26Probable NAD-dependent malic enzyme 2 OS=Bacillus ... [more]
MAOX_MYCTU1.693e-1936.17Putative malate oxidoreductase [NAD] OS=Mycobacter... [more]
MAOM_YEAST4.512e-1835.71NAD-dependent malic enzyme, mitochondrial OS=Sacch... [more]
MAOX_SCHPO7.696e-1832.30NAD-dependent malic enzyme OS=Schizosaccharomyces ... [more]
MLES_OENOE2.239e-1737.59Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 ... [more]
MLES_LACLA3.232e-1738.30Malolactic enzyme OS=Lactococcus lactis subsp. lac... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004517_A07 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936872 ID=CK936872; Name=CK936872; organism=Citrus sinensis; type=EST; length=735bp
GGGGAAGGGAGTGAGTGTTTGTTTGTTTTCGTTTTTGTGAAAAGCAGAAA
AAGTAAAAAGAGTGAGAATGGAGAGCACCATGAAGGAGATGAGAGACGGA
GCTTCGGTTCTCGACTTCGACTCGAAATCCACCGTCGAAGGCGGCGTTGA
AGACGTCTACGGTGAGGATCGTGCCACCGAGGACCAGCTCGTCACTCCCT
GGACCATCTCTGTTGCCAGCGGGTACTGTTTGTTGAGGGATCCACGCCAT
AACAAAGGGCTTGCTTTCACTGAGAAAGAGAGGGATGCCCACTACTTGCG
CGGCCTTTTGCCTCCAGCTGTTATAAGTCAACAACTTCAGGAGAAGAAAT
TGATGAACAGCATCAGACAATATGAAGTTCCGCTGCAAAAATATGTGGCC
ATGATGGAACTTGAGGAGAGAAATGAAAGACTGTTCTATAAGCTACTGAT
TGATAATGTTGAGGAACTTCTCCCAGTCGTTTACACTCCAACTGTTGGTG
AAGCTTGCCAGAAATATGGAAGTATCTTCAGGCGTCCTCAGGGTCTATAC
ATAAGTCTGAAAGAGAAGGGAAAGATTCTTGAGGTTTTGAAGAACTGGCC
TGAAAGGAGTATTCAGGTTATTGTTGTCACAGATGGTGAGCGCATTTTGG
GACTTGGGGATCTTGGCTNTCAGGGGATGGGAATTTCCTGTTGGGAAATT
GGCTTTTGTACACAGCACTTGGAGGCATTCGTCCC
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