CN186962
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_NEUCR (Superoxide dismutase [Mn], mitochondrial OS=Neurospora crassa GN=sod-2 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.859e-43 Identity = 61/133 (45.86%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVH--EGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDT--EFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 GH+NHS+FWKNLAP E SL I+ +GS + + SA +QGSGW WL ++ E RL + TT +QDP+V VP+ G+D+WEHAYYLQY N K Y++NIW V+NWK A + +Q Sbjct: 102 GHINHSLFWKNLAPAETPETNYSKAAPSLAAEIEKTWGSFDEFKKAFSAALLGIQGSGWGWLVKESTAEKGRLRIITTKDQDPVVGGE---VPVFGVDMWEHAYYLQYLNGKAAYVENIWKVINWKTAEERFQ 231 HSP 2 Score: 81.2629 bits (199), Expect = 4.859e-43 Identity = 39/73 (53.42%), Postives = 48/73 (65.75%), Query Frame = 2 Query: 101 LRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 + GL T +LP LPY Y+ALEP IS +IM+LHH KHHQ YVTN N A++ A+ D + Q AIKFNG Sbjct: 28 MAGLATYSLPQLPYAYNALEPYISAQIMELHHSKHHQTYVTNLNNALKVHVAAIASSDIPAQIAQQPAIKFNG 100
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_ASPFU (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus fumigatus GN=sodB PE=1 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 8.271e-43 Identity = 59/129 (45.74%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSS-LGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHS+FWKNLAP GGG+ + L AI+ +GS + + +QGSGW WL D +L + TT +QDP+ AP + G+D+WEHAYYLQY N K Y K IWNV+NW A + Y Sbjct: 73 GHINHSLFWKNLAPEKSGGGKIDQAPVLKAAIEQRWGSFDKFKDAFNTTLLGIQGSGWGWLVTDGPKGKLDITTTHDQDPVTGAAP----VFGVDMWEHAYYLQYLNDKASYAKGIWNVINWAEAENRY 197 HSP 2 Score: 76.2554 bits (186), Expect = 8.271e-43 Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 2 Query: 113 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 Q TLP LPY Y AL+P IS +IM+LHH+KHHQ YV N A+E +A D +V +Q AIKFNG Sbjct: 3 QQYTLPPLPYPYDALQPYISQQIMELHHKKHHQTYVNGLNAALEAQKKAAEANDVPKLVSVQQAIKFNG 71
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_PROFR (Superoxide dismutase [Mn/Fe] OS=Propionibacterium freudenreichii subsp. shermanii GN=sodA PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.406e-42 Identity = 58/121 (47.93%), Postives = 73/121 (60.33%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GHVNHS+FWKN+AP E P LG AID FGS + + + +A +QGSGW L D KR + T D +PLL +D+WEHA+YLQYKNVK DY+K+ WNV+NW Sbjct: 71 GHVNHSVFWKNMAP-KGSAPERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKR--INTLQFYDHQNNLPAGSIPLLQLDMWEHAFYLQYKNVKGDYVKSWWNVVNW 188 HSP 2 Score: 81.6481 bits (200), Expect = 1.406e-42 Identity = 37/65 (56.92%), Postives = 49/65 (75.38%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFN 316 TLP+LPYDYSALEP ISGEIM+LHH KHH+AYV N A+++L +A +K D + +L+ + FN Sbjct: 4 TLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKADFGAINKLEKDLAFN 68
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODF_TETPY (Superoxide dismutase [Fe] OS=Tetrahymena pyriformis PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.388e-42 Identity = 65/130 (50.00%), Postives = 81/130 (62.31%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPP--HSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GHVNH I+W NLAPV GGG P HS L AI +GS E I + AA+QGSGW WLG DT K L + NQD + + ++VPLL IDVWEHAYYL Y+N++P YL +W ++NW+ Y Sbjct: 64 GHVNHWIYWDNLAPVKSGGGVLPDEHSPLTKAIKEKWGSYENFITLFNTRTAAIQGSGWGWLGYDTVSKSLRLFELGNQD--MPEWSSIVPLLTIDVWEHAYYLDYQNLRPKYLTEVWKIVNWREVEKRY 191 HSP 2 Score: 64.3142 bits (155), Expect = 2.388e-42 Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 2 Query: 134 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFN 316 L Y+YS LEP +S ++ HH KHHQAYV N N EQ+ A + D + LQ A++FN Sbjct: 1 LNYEYSDLEPVLSAHLLSFHHGKHHQAYVNNLNATYEQIAAATKENDAHKIATLQSALRFN 61
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_GLOMM (Superoxide dismutase [Mn], mitochondrial OS=Glossina morsitans morsitans GN=Sod2 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.274e-42 Identity = 58/128 (45.31%), Postives = 77/128 (60.16%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHSI+W+NL+P P + L AI+ F S E + +SA +QGSGW WLG + + K+L + +NQ+PL LVPL IDVWEHAYYLQ KN Y++ W++ NWK SD Y Sbjct: 88 GHLNHSIYWQNLSPTKS----EPSADLKKAIEEQFSSFEQFKKDLSALSIGVQGSGWGWLGYNKKXKKLQILAVSNQEPLQA-VTGLVPLFAIDVWEHAYYLQXKNXXAKYVEAXWDIANWKBISDRY 210 HSP 2 Score: 74.7146 bits (182), Expect = 5.274e-42 Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 2 Query: 77 LGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFN 316 L +++ +RG T LP LPYDY AL P IS +I+++HH KHHQ YV N N EQ+ +A +K D + VV+L FN Sbjct: 8 LSRTIKAAVRGKHT--LPKLPYDYGALAPIISKDILEVHHGKHHQTYVNNLNAVEEQMTEAHSKKDVNKVVELSKNYAFN 85
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_PENCH (Superoxide dismutase [Mn], mitochondrial OS=Penicillium chrysogenum GN=SOD PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.385e-41 Identity = 61/133 (45.86%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAP----VHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFK-RLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHS+FWKNL P ++ G P +L AI + +GS EA ++ AE LQGSGW WL K RL + TT +QDP+ AP VP+ G+D+WEHAYYLQY N K Y++ IW +++W A Y Sbjct: 74 GHINHSLFWKNLTPPGTPANDIAGAP---ALREAIVSRWGSHEAFVKAFGAELLGLQGSGWGWLVSKGGAKGRLEIVTTKDQDPV--NAPD-VPVFGVDMWEHAYYLQYLNNKAGYVEGIWKIIHWAEAEKRY 200 HSP 2 Score: 79.7221 bits (195), Expect = 4.385e-41 Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 2 Query: 113 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 QT TLP LPY Y ALEP IS +IM+LHHQKHHQ Y+ N N A+ A D T++ LQ ++FNG Sbjct: 4 QTHTLPPLPYAYDALEPVISKQIMELHHQKHHQTYINNLNAALSAQASATASNDVPTLISLQQKLRFNG 72
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODB_ASPNG (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus niger GN=sodB PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.714e-41 Identity = 55/130 (42.31%), Postives = 74/130 (56.92%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHS--SLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHS+FWKNLA S SL AI+ +GS++ A +QGSGW WL + L + TT +QDP+ +P+ G+D+WEHAYYLQY N K Y++NIW V+NW+ A Y Sbjct: 73 GHINHSLFWKNLARYDSPATNLERSAPSLKDAIEKQWGSVKNFTDAFEAVLLGIQGSGWGWLVSSGKTGFLEIVTTKDQDPVTGP----IPVFGVDMWEHAYYLQYLNNKASYVQNIWKVINWEEAEHRY 198 HSP 2 Score: 82.8037 bits (203), Expect = 5.714e-41 Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 TLPDLPYDY ALEP IS +IM+LHH+KHHQ YV N N A+ AL+ D + ++ +Q +KFNG Sbjct: 6 TLPDLPYDYDALEPIISKQIMELHHKKHHQTYVNNLNAALASQASALDSNDITQLISIQQKLKFNG 71
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_ASPOR (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus oryzae GN=sodB PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 7.445e-41 Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAP--VHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 GH+NHS+FWKNLAP E + L AI+ +GS+E + A LQGSGW WL + +L + +T +QDP+ K VP+ G+D+WEHAYYLQY N K Y++ IW V+NW+ A D ++ Sbjct: 73 GHINHSLFWKNLAPHASPETNIDQAAPVLKAAIEAQYGSVEKFKEAFGATLLGLQGSGWGWLVANGPGGKLEIVSTKDQDPVTDK----VPVFGVDMWEHAYYLQYFNNKASYVEGIWKVLNWRTAEDRFK 199 HSP 2 Score: 74.7146 bits (182), Expect = 7.445e-41 Identity = 35/68 (51.47%), Postives = 44/68 (64.71%), Query Frame = 2 Query: 116 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 T +LP LPY Y ALEP I +IM++HHQKHHQ Y+TN N A+ AL + ++ LQ IKFNG Sbjct: 4 TFSLPPLPYAYDALEPVICKQIMEIHHQKHHQTYITNLNAALSAQSTALAANNIPQLINLQQKIKFNG 71
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_MYCFO (Superoxide dismutase [Mn] OS=Mycobacterium fortuitum GN=sodA PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 2.797e-40 Identity = 61/128 (47.66%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GHVNHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW+ + Y Sbjct: 72 GHVNHSIWWKNLSP---NGGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGDRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNWEDVQNRY 194 HSP 2 Score: 65.0846 bits (157), Expect = 2.797e-40 Identity = 31/55 (56.36%), Postives = 37/55 (67.27%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTV 286 TLPDL YDY ALEP ISG+I +LHH KHH AYV N AV +L +A D + + Sbjct: 5 TLPDLDYDYGALEPHISGQINELHHSKHHAAYVKGVNDAVAKLDEARANGDHAAI 59
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_MYCLE (Superoxide dismutase [Mn] OS=Mycobacterium leprae GN=sodA PE=3 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 4.748e-40 Identity = 60/121 (49.59%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GHVNHSI+WKNL+P GG+ P L ID FGS + + SA LQGSGW LG DT +L+ +Q V+ ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 72 GHVNHSIWWKNLSP---NGGDKPTGGLATDIDETFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGNKLLTFQLYDQQANVSLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187 HSP 2 Score: 65.4698 bits (158), Expect = 4.748e-40 Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTV 286 TLPDL +DY+ALEP ISGEI ++HH KHH AYV N A+ +L +A K D S + Sbjct: 5 TLPDLDWDYAALEPHISGEINEIHHTKHHAAYVKGVNDALAKLDEARAKDDHSAI 59 The following BLAST results are available for this feature:
BLAST of CN186962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186962 ID=CN186962; Name=CN186962; organism=Citrus sinensis; type=EST; length=715bpback to top |