CN186962
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_STRPN (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae GN=sodA PE=3 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 6.491e-36 Identity = 54/128 (42.19%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NH++FW+ + P P + L AID FGS E +A GSGW WL ++ E K L V +TANQD +++ P+LG+DVWEHAYY++Y+NV+PDY+K ++V+NW ++Y Sbjct: 77 GHLNHALFWELMTPEKTA----PSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWLVVNKEGK-LEVTSTANQDTPISEGKK--PILGLDVWEHAYYVKYRNVRPDYIKAFFSVINWNKVDELY 197 HSP 2 Score: 60.8474 bits (146), Expect = 6.491e-36 Identity = 26/43 (60.47%), Postives = 30/43 (69.77%), Query Frame = 2 Query: 119 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 + LP+LPY Y ALEP I E M LHH KHHQ YV N N A+E+ Sbjct: 3 IILPELPYAYDALEPYIDAETMHLHHDKHHQTYVNNANAALEK 45
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_HAEIN (Superoxide dismutase [Mn] OS=Haemophilus influenzae GN=sodA PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 8.445e-36 Identity = 56/134 (41.79%), Postives = 79/134 (58.96%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 714 GH NHS+FWK+L G +L AI+ FGS++A + A GSGW WL L E K VV T +PL+ K PLLG+DVWEHAYYL+++N +PDY+K WNV+NW + ++ ++++ Sbjct: 79 GHTNHSLFWKSLKK-----GTTLQGALKDAIERDFGSVDAFKAEFEKAAATRFGSGWAWLVLTAEGKLAVVSTANQDNPLMGKEVAGCEGFPLLGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDFVAERFEQK 207 HSP 2 Score: 58.151 bits (139), Expect = 8.445e-36 Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL 250 TLP+L Y Y+ALEP + M++HH KHHQAYV N N A+E L Sbjct: 4 TLPELGYAYNALEPHFDAQTMEIHHSKHHQAYVNNANAALEGL 46
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_CHLRE (Superoxide dismutase [Mn], mitochondrial OS=Chlamydomonas reinhardtii GN=SODA PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.866e-35 Identity = 56/133 (42.11%), Postives = 83/133 (62.41%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTL---VPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 708 GH NHS FWK + G P+ + AI+ FGS++ + K +A A GSGW WL + + L +++T NQD PL+T P + +PLLG+DVWEHAYYL+Y+N +P+Y+ WNV+NW+ ++ Y+ Sbjct: 80 GHYNHSFFWKVMTNPSNTNG--PNGDVKAAIEASFGSVDEMKAKFNAAAAGRFGSGWAWLSVKPDGS-LSIDSTPNQDNPLMTALPDVAGGIPLLGLDVWEHAYYLKYQNRRPEYIAAWWNVVNWEQVAENYK 209 HSP 2 Score: 56.9954 bits (136), Expect = 1.866e-35 Identity = 30/79 (37.97%), Postives = 41/79 (51.90%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQA-------LNKV--------DTSTVVQLQGAIKFN 316 LP LPYDY +LEP + M +HH KHHQ YV N N A+++ + LNK D +TV++ G +N Sbjct: 5 LPPLPYDYGSLEPHVDATTMNIHHTKHHQTYVNNLNAALDKFPELKDLGLVDLNKAVGTDKLPKDVATVIRNNGGGHYN 83
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_DEIRA (Superoxide dismutase [Mn] OS=Deinococcus radiodurans GN=sodA PE=1 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 1.867e-35 Identity = 60/133 (45.11%), Postives = 77/133 (57.89%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVH-EGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH NHS+FW+ + + G P L AI++ FGS +A QK GSGW WL + +L V +TANQD PL+ +A V P+LG+DVWEHAYYL Y+N +PDYL WNV+NW S Y Sbjct: 77 GHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKDG--KLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWNVVNWDEVSKRY 207 HSP 2 Score: 63.1586 bits (152), Expect = 1.867e-35 Identity = 35/75 (46.67%), Postives = 42/75 (56.00%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKA----------VEQLFQALNKVDTSTVVQLQGAIKFN 316 TLP LPY Y ALEP I M++HH KHHQ YV N NKA VEQL Q L++V +GA++ N Sbjct: 4 TLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVPADK----KGALRNN 74
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_STAES (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis (strain ATCC 12228) GN=sodA PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 3.172e-35 Identity = 55/128 (42.97%), Postives = 82/128 (64.06%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHS+FW+ L+P E GE I +GSL+ ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ +++Y Sbjct: 77 GHLNHSLFWELLSPNSEEKGEVVDK-----IKEQWGSLDEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYINAFWNVVNWEKVNELY 195 HSP 2 Score: 56.9954 bits (136), Expect = 3.172e-35 Identity = 24/40 (60.00%), Postives = 28/40 (70.00%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 LP+LPY Y ALEP I + M++HH KHH YVT N AVE Sbjct: 5 LPNLPYAYDALEPHIDKQTMEIHHDKHHNTYVTKLNSAVE 44
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_STAEQ (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=sodA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 3.172e-35 Identity = 55/128 (42.97%), Postives = 82/128 (64.06%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHS+FW+ L+P E GE I +GSL+ ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ +++Y Sbjct: 77 GHLNHSLFWELLSPNSEEKGEVVDK-----IKEQWGSLDEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYINAFWNVVNWEKVNELY 195 HSP 2 Score: 56.9954 bits (136), Expect = 3.172e-35 Identity = 24/40 (60.00%), Postives = 28/40 (70.00%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 244 LP+LPY Y ALEP I + M++HH KHH YVT N AVE Sbjct: 5 LPNLPYAYDALEPHIDKQTMEIHHDKHHNTYVTKLNSAVE 44
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_LACLM (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=sodA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.130e-35 Identity = 57/130 (43.85%), Postives = 79/130 (60.77%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH+NHS FW L P +G +G AI FGS E + A GSGW WL +D E +L V +TANQD +++ L P+LG+DVWEHAYYL+Y NV+PDY++ +N++NW +++Y K Sbjct: 78 GHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVVD-EAGKLKVVSTANQDNPISEG--LTPVLGLDVWEHAYYLKYHNVRPDYIEAFFNLVNWDKVNELYAK 204 HSP 2 Score: 54.6842 bits (130), Expect = 4.130e-35 Identity = 24/42 (57.14%), Postives = 29/42 (69.05%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 TLP+LPY +ALEP M+LHH KHHQ YV N N A+E+ Sbjct: 4 TLPELPYAPNALEPFFDEATMRLHHGKHHQTYVNNLNAAIEK 45
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_LACLA (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. lactis GN=sodA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.130e-35 Identity = 57/130 (43.85%), Postives = 79/130 (60.77%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH+NHS FW L P +G +G AI FGS E + A GSGW WL +D E +L V +TANQD +++ L P+LG+DVWEHAYYL+Y NV+PDY++ +N++NW +++Y K Sbjct: 78 GHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVVD-EAGKLKVVSTANQDNPISEG--LTPVLGLDVWEHAYYLKYHNVRPDYIEAFFNLVNWDKVNELYAK 204 HSP 2 Score: 54.6842 bits (130), Expect = 4.130e-35 Identity = 24/42 (57.14%), Postives = 29/42 (69.05%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ 247 TLP+LPY +ALEP M+LHH KHHQ YV N N A+E+ Sbjct: 4 TLPELPYAPNALEPFFDEATMRLHHGKHHQTYVNNLNAAIEK 45
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_LISIV (Superoxide dismutase [Mn] OS=Listeria ivanovii GN=sodA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.131e-35 Identity = 53/121 (43.80%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 684 GH NH++FW +L+P GG P +L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD +++ T P+LG+DVWEHAYYL+++N +P+Y+ WNV+NW Sbjct: 78 GHANHTLFWSSLSP---NGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVNNG--KLEIVSTANQDSPLSEGKT--PVLGLDVWEHAYYLKFQNRRPEYIDTFWNVINW 191 HSP 2 Score: 54.299 bits (129), Expect = 4.131e-35 Identity = 28/75 (37.33%), Postives = 40/75 (53.33%), Query Frame = 2 Query: 116 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV-------QLQGAIKFNG 319 T LP LPY Y ALEP E M++H+ KHH YVT N+AV + +K V +++GA++ +G Sbjct: 2 TYELPKLPYTYDALEPNFDKETMEIHYTKHHNIYVTKLNEAVSGHAELASKPGEELVANLDSVPEEIRGAVRNHG 76
BLAST of CN186962 vs. ExPASy Swiss-Prot
Match: SODM_PASMU (Superoxide dismutase [Mn] OS=Pasteurella multocida GN=sodA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 7.000e-35 Identity = 60/135 (44.44%), Postives = 84/135 (62.22%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 714 GH+NHS+FWK+L G +L AI FGS+EA + A GSGW WL L E +L V +TANQD P++ KA PLLG+DVWEHAYYL+++N +PDY+K W+V+NW + ++ ++K+ Sbjct: 78 GHLNHSLFWKSLKK-----GTTLQGALKDAIVRDFGSVEAFQAEFEKAAATRFGSGWAWLVLQ-ENGKLAVVSTANQDSPVMGKAIAGCEGYPLLGLDVWEHAYYLKFQNRRPDYIKEFWHVVNWDFVAERFEKK 206 HSP 2 Score: 56.9954 bits (136), Expect = 7.000e-35 Identity = 25/43 (58.14%), Postives = 29/43 (67.44%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL 250 TLP+L Y Y ALEP M++HH KHHQAYV N N A+E L Sbjct: 4 TLPELGYAYDALEPHFDAMTMEIHHSKHHQAYVNNANAALENL 46 The following BLAST results are available for this feature:
BLAST of CN186962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186962 ID=CN186962; Name=CN186962; organism=Citrus sinensis; type=EST; length=715bpback to top |