CK936853

Overview
NameCK936853
Unique NameCK936853
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length486
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936853 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 7.801e-20
Identity = 44/69 (63.77%), Postives = 54/69 (78.26%), Query Frame = 1
Query:  208 FSPRDRKYPNGTRPNRATVSGYWKATGTDKAIY-GGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLN 411
            FS +D+KYP GTR NRAT +G+WKATG DKAI+   +  +G++K LVFY GR P G KTDWIMHEYRL+
Sbjct:   72 FSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKKTDWIMHEYRLD 140          
BLAST of CK936853 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.019e-19
Identity = 40/69 (57.97%), Postives = 54/69 (78.26%), Query Frame = 1
Query:  208 FSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLND 414
            FS  D+KY NG++ NRAT  GYWK TG D+ I  GS+ +G+KK LV++KGR P+G +T+W+MHEYRL+D
Sbjct:   70 FSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGERTNWVMHEYRLSD 138          
BLAST of CK936853 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.331e-19
Identity = 44/69 (63.77%), Postives = 52/69 (75.36%), Query Frame = 1
Query:  208 FSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGS--KYLGVKKALVFYKGRPPKGIKTDWIMHEYRL 408
            FS RDRKYP G R NRAT +GYWKATG D+ I+       +G+KK LVFYKGR PKG K++W+MHEYRL
Sbjct:   76 FSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRL 144          
BLAST of CK936853 vs. ExPASy Swiss-Prot
Match: NAC42_ARATH (NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.056e-19
Identity = 51/141 (36.17%), Postives = 65/141 (46.10%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPGLFSTYMPVIFL*LNDYMIYYERVLPY*DNLLVMIVFANYI*KCRES*IRREGMVLFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTR 423
            ++DIYK+DPW LP                                            R S +  +    F  R RKY N  RPNR T SG+WKATG DK +Y     +G+KK+LV+Y G   KG KTDW+MHE+RL   T+
Sbjct:   52 QIDIYKYDPWDLP--------------------------------------------RVSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSNLDCVGLKKSLVYYLGSAGKGTKTDWMMHEFRLPSTTK 148          
BLAST of CK936853 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.625e-19
Identity = 44/70 (62.86%), Postives = 51/70 (72.86%), Query Frame = 1
Query:  208 FSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGS--KYLGVKKALVFYKGRPPKGIKTDWIMHEYRLN 411
            F+ RDRKYP G R NRAT +GYWKATG D+ I        LG+KK LVFYKGR PKG K+ W+MHEYRL+
Sbjct:   79 FTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRLD 148          
BLAST of CK936853 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 2.509e-18
Identity = 47/100 (47.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:  208 FSPRDRKYPNGTRPNRATVSGYWKATGTDKAI-----------YGGS-----KYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPHKHNGSMKVS 459
            FS +D KYP G R NRAT  GYWKATG D+ I           YGGS     + +G+KK LVFY GR PKG KT+W+MHE+RL+      H H+ +++++
Sbjct:   78 FSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRLH---ANLHNHHPNLRLN 174          
BLAST of CK936853 vs. ExPASy Swiss-Prot
Match: NAC61_ARATH (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana GN=NAC061 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.236e-13
Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 1
Query:  193 EGMVLFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG-GSKYLGVKKALVFYKGRPPKGIKTDWIMHEYR 405
            E  + F PR  +   G RP+R T SGYWKATG+   ++   ++ +GVKK +VFY G+ P G KT W M+EY+
Sbjct:   64 EQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKAPTGRKTKWKMNEYK 135          
BLAST of CK936853 vs. ExPASy Swiss-Prot
Match: NAC90_ARATH (NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.206e-12
Identity = 35/77 (45.45%), Postives = 45/77 (58.44%), Query Frame = 1
Query:  193 EGMVLFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG-GSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPT 420
            E    F PR  +   G RP+R T SGYWKATG+   ++   +K +G KK +VFY G+ P G KT W M+EY   D T
Sbjct:   65 EQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTGKAPTGRKTKWKMNEYHAVDET 141          
BLAST of CK936853 vs. ExPASy Swiss-Prot
Match: NAC68_ARATH (NAC domain-containing protein 68 OS=Arabidopsis thaliana GN=NAC68 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.987e-12
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 1
Query:  208 FSPRDRKYPNGTRPNRATVSGYWKATGTDKAIY---GGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPH 432
            FSP +   PN  +  R T SG+WK TG D+ I    G    +G+KK LV+++G+ P G++T W+MHEY +   T  PH
Sbjct:   67 FSPIEYTNPNKMKMKRTTGSGFWKPTGVDREIRDKRGNGVVIGIKKTLVYHEGKSPHGVRTPWVMHEYHI---TCLPH 141          
BLAST of CK936853 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.334e-11
Identity = 32/70 (45.71%), Postives = 42/70 (60.00%), Query Frame = 1
Query:  208 FSPRDRKYPNGTRPNRATVSGYWKATGTDKAIY---GGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRL 408
            F P++          R T SGYWKATG D+ I    G    +G+KK LV+Y+GR PKG+ T W+MHEY +
Sbjct:   66 FCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVYYEGRVPKGVWTPWVMHEYHI 135          
The following BLAST results are available for this feature:
BLAST of CK936853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
NAC76_ORYSJ7.801e-2063.77NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC78_ARATH1.019e-1957.97NAC domain-containing protein 78 OS=Arabidopsis th... [more]
NAC98_ARATH1.331e-1963.77Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC42_ARATH5.056e-1936.17NAC domain-containing protein 42 OS=Arabidopsis th... [more]
NAC54_ARATH8.625e-1962.86Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC77_ORYSJ2.509e-1847.00NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC61_ARATH9.236e-1345.83Putative NAC domain-containing protein 61 OS=Arabi... [more]
NAC90_ARATH1.206e-1245.45NAC domain-containing protein 90 OS=Arabidopsis th... [more]
NAC68_ARATH5.987e-1242.31NAC domain-containing protein 68 OS=Arabidopsis th... [more]
NAC69_ARATH1.334e-1145.71NAC domain-containing protein 69 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004517_C05 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936853 ID=CK936853; Name=CK936853; organism=Citrus sinensis; type=EST; length=486bp
GAAGTGGATATTTACAAGTTTGACCCCTGGCAACTCCCTGGTTTGTTTTC
TACTTATATGCCCGTAATTTTTCTTTGACTAAATGATTATATGATTTATT
ATGAACGAGTACTGCCTTATTAAGACAATTTGTTAGTAATGATTGTGTTT
GCAAATTATATATGAAAATGTAGAGAAAGCTGAATTCGGAGAGAAGGAAT
GGTACTTTTCAGCCCACGAGACAGGAAGTATCCCAATGGGACGAGGCCTA
ACAGGGCAACTGTATCGGGATATTGGAAGGCCACGGGGACTGATAAGGCA
ATATATGGTGGGTCTAAATATCTTGGTGTCAAGAAAGCTCTTGTTTTTTA
TAAGGGCAGGCCCCCCAAGGGAATCAAGACTGATTGGATCATGCATGAAT
ATCGGCTAAATGACCCAACAAGACAACCCCACAAACATAATGGTTCCATG
AAAGTGAGCATAAATTGTGTGCATGTTTTTCTCTAT
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