CK936838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1_PICPG (Small COPII coat GTPase SAR1 OS=Pichia pastoris (strain GS115) GN=SAR1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.463e-13 Identity = 36/92 (39.13%), Postives = 56/92 (60.87%), Query Frame = 3 Query: 111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 K ++L +GLD AGKTT+L+ LK + T PT E + N+ FT +D+GG ++ R +W+ YF G++++VD D +R E+R EL Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELSIGNVRFTTFDLGGHEQARRVWKDYFPEVDGIVYLVDIADPERFEESRVEL 110
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1_CAEEL (GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13 Identity = 36/94 (38.30%), Postives = 58/94 (61.70%), Query Frame = 3 Query: 105 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 A K+ +++ +GLD AGKTT+L+ LK I +PT+ E + ISFT +D+GG + R +W+ YF ++F++D D +R+ E+R EL Sbjct: 18 ANKKGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVEL 111
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1A_PONAB (GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13 Identity = 38/107 (35.51%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 69 GLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELH 389 G S F L+ KK +++ +GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG ++ R +W++Y G++F+VD D R+VE++ EL+ Sbjct: 11 GFSSVLQFLGLY-KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELN 116
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1A_HUMAN (GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13 Identity = 38/107 (35.51%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 69 GLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELH 389 G S F L+ KK +++ +GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG ++ R +W++Y G++F+VD D R+VE++ EL+ Sbjct: 11 GFSSVLQFLGLY-KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELN 116
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: CIN4_YEAST (GTP-binding protein CIN4 OS=Saccharomyces cerevisiae GN=CIN4 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13 Identity = 36/95 (37.89%), Postives = 60/95 (63.16%), Query Frame = 3 Query: 111 KEMRILMVGLDAAGKTTILYKLKLGEIVTT---IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 KE+R L++GLD +GK+TI+ KL + +PT+GF + ++ K+++ ++WD+GGQ +RP W +YF TQ +I+ +D + R E EL Sbjct: 15 KEIRCLILGLDNSGKSTIVNKLLPKDEQNNDGIMPTVGFQIHSLMIKDVTISLWDIGGQRTLRPFWDNYFDKTQAMIWCIDVSLSMRFDETLQEL 109
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL10_MOUSE (ADP-ribosylation factor-like protein 10 OS=Mus musculus GN=Arl10 PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 5.401e-13 Identity = 31/95 (32.63%), Postives = 51/95 (53.68%), Query Frame = 3 Query: 111 KEMRILMVGLDAAGKTTILYKLK-LGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHR 392 ++ +L++GLD +GK+T L L + +PT GFN + KN + ++G +R W+ + L+F+VDS DR R+ AR EL + Sbjct: 75 EQREVLVLGLDGSGKSTFLRMLAGKPPVEGHVPTWGFNSVRLPTKNFEVDLLEIGDSQNLRFYWKEFVNEVDVLVFMVDSTDRLRLPWARQELQK 169 HSP 2 Score: 34.6538 bits (78), Expect = 5.401e-13 Identity = 21/53 (39.62%), Postives = 31/53 (58.49%), Query Frame = 2 Query: 416 DAVLLVFANKQDLPNAMNAAEITDKLG-LHSLRQRH-WYIQSTCATSGEGLYE 568 D +++ ANKQDL AMN E+ +LG L S QR + + ++ A +G G E Sbjct: 176 DLPVVIVANKQDLSGAMNMVELQQELGLLASYNQREVFLLAASIAPAGSGFGE 228
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL15_BOVIN (ADP-ribosylation factor-like protein 15 OS=Bos taurus GN=ARL15 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.488e-13 Identity = 37/96 (38.54%), Postives = 60/96 (62.50%), Query Frame = 3 Query: 105 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS-NDRDRVVEARDELH 389 A+ E ++ +GL +GKT++L KL + + T GF+++ V ++N V ++GG D IR W Y+Q +QG+IFV+DS + D + AR+ELH Sbjct: 29 ARPEYDLVCIGLTGSGKTSLLSKLCSESPDSVVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLETARNELH 124
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.167e-13 Identity = 37/106 (34.91%), Postives = 65/106 (61.32%), Query Frame = 3 Query: 69 GLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 G S F L+ KK +++ +GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG + R +W++Y G++F+VD D +R++E+++EL Sbjct: 11 GFSSVLQFLGLY-KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEEL 115
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL15_PONAB (ADP-ribosylation factor-like protein 15 OS=Pongo abelii GN=ARL15 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.167e-13 Identity = 37/96 (38.54%), Postives = 59/96 (61.46%), Query Frame = 3 Query: 105 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS-NDRDRVVEARDELH 389 A+ E ++ +GL +GKT++L KL + T GF+++ V ++N V ++GG D IR W Y+Q +QG+IFV+DS + D + AR+ELH Sbjct: 29 ARPEYDLVCIGLTGSGKTSLLSKLCSESPDNVVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAARNELH 124
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL15_HUMAN (ADP-ribosylation factor-like protein 15 OS=Homo sapiens GN=ARL15 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.167e-13 Identity = 37/96 (38.54%), Postives = 59/96 (61.46%), Query Frame = 3 Query: 105 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS-NDRDRVVEARDELH 389 A+ E ++ +GL +GKT++L KL + T GF+++ V ++N V ++GG D IR W Y+Q +QG+IFV+DS + D + AR+ELH Sbjct: 29 ARPEYDLVCIGLTGSGKTSLLSKLCSESPDNVVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAARNELH 124 The following BLAST results are available for this feature:
BLAST of CK936838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936838 ID=CK936838; Name=CK936838; organism=Citrus sinensis; type=EST; length=720bpback to top |