CK936820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.943e-21 Identity = 51/99 (51.52%), Postives = 64/99 (64.65%), Query Frame = 1 Query: 127 PVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417 P+T+ A++CG V+ +APCI +L P CCSGV SLN+ ARTTPDRQ AC CL A + I AAGLP CGV IPYKIS +T+C+ V+ Sbjct: 20 PITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 118
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.314e-21 Identity = 52/94 (55.32%), Postives = 60/94 (63.83%), Query Frame = 1 Query: 139 AITCGQVTASLAPCIPFLRTGGRFPPPP-CCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417 AI+ QV +SL PC+ ++R P PP C G+RSL SAAR DRQAAC C+K I I VAAGLP QC V IPYKISPS DC RV+ Sbjct: 27 AISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 5.653e-21 Identity = 47/91 (51.65%), Postives = 63/91 (69.23%), Query Frame = 1 Query: 142 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414 ++CG V +A CI +LR G P CC+GV++L ++A TT DR+ AC CL A TI G+ +AAGLP++CGV IPYKISPST+C +V Sbjct: 1 LSCGDVATQMASCINYLRGAGPLPAA-CCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQV 90
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTP2_BRANA (Non-specific lipid-transfer protein 2 OS=Brassica napus GN=LTP2 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.643e-21 Identity = 51/99 (51.52%), Postives = 65/99 (65.66%), Query Frame = 1 Query: 127 PVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417 P+T+ A++CG V+ +APCI +L G P CC+GV +LN+ ARTTPDRQ AC CL A + + AAGLP CGV IPYKIS ST+C+ VR Sbjct: 20 PITSNAALSCGTVSGYVAPCIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTP3_BRANA (Non-specific lipid-transfer protein 3 OS=Brassica napus GN=LTP3 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.645e-20 Identity = 50/93 (53.76%), Postives = 61/93 (65.59%), Query Frame = 1 Query: 139 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417 A++CG V+ +LA CI +L G P CCSGV SLN+ ARTTPDRQ AC CL A + I AAGLP CGV IPYKIS +T+C+ V+ Sbjct: 26 ALSCGTVSGNLAACIGYLTQNGPVPTA-CCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 117
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.148e-20 Identity = 46/94 (48.94%), Postives = 64/94 (68.09%), Query Frame = 1 Query: 139 AITCGQVTASLAPCIPFLRTGGRFPPPP-CCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417 A+TC VT +L PC+ +L+ G PPP CC+GVRSL +AA+T DR+ ACNC+K A + + VAA L SQCGVR+ Y +SP+ +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.148e-20 Identity = 50/103 (48.54%), Postives = 68/103 (66.02%), Query Frame = 1 Query: 127 PVT--NAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNV----AAGLPSQCGVRIPYKISPSTDCSRVR 417 P+T A+TCG V +++APCI ++ GG P CC+GV LNS ARTTPDRQ AC CL+ A R + PN+ AAG+P CGV +P+ IS +T+C+ V+ Sbjct: 20 PITANRALTCGTVNSNVAPCIGYITQGGTLPGA-CCTGVSKLNSMARTTPDRQQACRCLETA---ARALGPNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK 118
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.148e-20 Identity = 46/94 (48.94%), Postives = 64/94 (68.09%), Query Frame = 1 Query: 139 AITCGQVTASLAPCIPFLRTGGRFPPPP-CCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417 A+TC VT +L PC+ +L+ G PPP CC+GVRSL +AA+T DR+ ACNC+K A + + VAA L SQCGVR+ Y +SP+ +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTPB_BRAOT (Non-specific lipid-transfer protein B OS=Brassica oleracea var. italica GN=WAX9B PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.664e-20 Identity = 49/93 (52.69%), Postives = 61/93 (65.59%), Query Frame = 1 Query: 139 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417 A++CG V+ +LA CI +L G P CC+GV +LN+ ARTTPDRQ AC CL A + + AAGLP CGV IPYKIS ST+C+ VR Sbjct: 26 ALSCGTVSGNLAACIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTP1_BRANA (Non-specific lipid-transfer protein 1 OS=Brassica napus GN=LTP1 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.786e-20 Identity = 49/93 (52.69%), Postives = 60/93 (64.52%), Query Frame = 1 Query: 139 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417 A++CG V+ +LA CI +L G P CC+GV +LN+ ARTTPDRQ AC CL A + AAGLP CGV IPYKIS ST+C+ VR Sbjct: 26 ALSCGTVSGNLAACIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANAFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117 The following BLAST results are available for this feature:
BLAST of CK936820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936820 ID=CK936820; Name=CK936820; organism=Citrus sinensis; type=EST; length=631bpback to top |