CK936820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.250e-20 Identity = 45/92 (48.91%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 139 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414 AITCGQV+++L PC + + G P CCSGV+ L AR+T D+QA C CLK G + AAG+PS+CGV +PY IS S DCS++ Sbjct: 26 AITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGAYNAGR---AAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.051e-19 Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 127 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414 P + I CG VT++LA C+ +L G P CC GV+SL A+TTPDR+ C CLK A I+G+ ++ A LP+ CGV IPY IS ST+C + Sbjct: 21 PTESTIQCGTVTSTLAQCLTYLTNSGPLPSQ-CCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.291e-19 Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 1 Query: 139 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414 A+ CGQV + + PC+ +++ GG P CC+GVR L++ A+++ DRQ CNCLK I + N AA +PS+C V +PY ISP DCSR+ Sbjct: 26 ALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.911e-19 Identity = 40/92 (43.48%), Postives = 60/92 (65.22%), Query Frame = 1 Query: 139 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414 A++CG VT+S+APC+ ++ P CCSGVR+LN A ++ DR+ AC+CLK + R + AA +PS+CGV + + IS S DCS++ Sbjct: 29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.911e-19 Identity = 40/92 (43.48%), Postives = 60/92 (65.22%), Query Frame = 1 Query: 139 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414 A++CG VT+S+APC+ ++ P CCSGVR+LN A ++ DR+ AC+CLK + R + AA +PS+CGV + + IS S DCS++ Sbjct: 29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 3.430e-18 Identity = 39/92 (42.39%), Postives = 61/92 (66.30%), Query Frame = 1 Query: 139 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414 AITC VT +L PC+P+LR+GG+ P P CC+G + L A RT DR+ AC C K A ++ ++P++A+ LP +CG+ I+P+ +C+ + Sbjct: 26 AITCNDVTGNLTPCLPYLRSGGK-PTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQLK-VRPDMASSLPGKCGISTSIPINPNVNCNTI 115
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.479e-18 Identity = 44/92 (47.83%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 139 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414 AI C QV LA C+P+L+ GG P P CC+G+ SL +AA DRQ ACNCLK TI GI + A LP++CGV I S + DC+ + Sbjct: 28 AIACPQVNMYLAQCLPYLKAGGN-PSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTPA_RICCO (Non-specific lipid-transfer protein A OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.702e-17 Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 142 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414 + CGQV +SLA CIPFL G P CC+GV++L + A T+ DR+AAC C+K A IK + A+ LP +CGV I IS +T+C + Sbjct: 1 VDCGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNCQAI 91
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.953e-17 Identity = 50/100 (50.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 127 PVT-NAI-TCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIR-GIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417 P+T NA+ +CG V +LA CI +L G CC+GV +L + A TTPDRQ AC CL+ A + G+ AAGLPS C V IPYKIS ST+C+ VR Sbjct: 20 PITANALMSCGTVNGNLAGCIAYLTRGAPLTQG-CCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of CK936820 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 6.468e-17 Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 139 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNSAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414 AI CG V + + PC+ +++ GG P CC GV++L++ AR+ DRQ+ACNCLK I + + A +P +CGV +PY IS + DCSRV Sbjct: 23 AIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113 The following BLAST results are available for this feature:
BLAST of CK936820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936820 ID=CK936820; Name=CK936820; organism=Citrus sinensis; type=EST; length=631bpback to top |