CK936797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936797 vs. ExPASy Swiss-Prot
Match: IDHC_HUMAN (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Homo sapiens GN=IDH1 PE=1 SV=2) HSP 1 Score: 273.863 bits (699), Expect = 7.365e-73 Identity = 126/199 (63.32%), Postives = 155/199 (77.89%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPITCKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLY 797 +VEM GDEMTR+ W+ IK+KLIFP++ELD+ +DLG+ NRDAT+D+VT ++AEA K+NV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE I CKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P +K V+NF GGVA+ MYN D+SI FA +S A K WPLY Sbjct: 10 VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKHNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPSDGTQKVTYLVHNFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLY 208
BLAST of CK936797 vs. ExPASy Swiss-Prot
Match: IDHC_MICME (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus mexicanus GN=IDH1 PE=2 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 9.619e-73 Identity = 126/199 (63.32%), Postives = 155/199 (77.89%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPITCKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLY 797 +VEM GDEMTR+ W+ IK+KLI P++ELD+ +DLG+ NRDAT+D+VT ++AEA KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE I CKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ F P+ +K V++F GGVA+ MYN D+SI FA +S A K WPLY Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITFTPKDGSQKVTYLVHSFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLY 208
BLAST of CK936797 vs. ExPASy Swiss-Prot
Match: IDHC_RAT (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus GN=Idh1 PE=1 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 2.143e-72 Identity = 125/199 (62.81%), Postives = 155/199 (77.89%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPITCKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLY 797 +VEM GDEMTR+ W+ IK+KLI P++ELD+ +DLG+ NRDAT+D+VT ++AEA KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE I CKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P+ +K V++F GGVA+ MYN D+SI FA +S A K WPLY Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPKDGSQKVTYLVHDFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLY 208
BLAST of CK936797 vs. ExPASy Swiss-Prot
Match: IDHC_MOUSE (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus GN=Idh1 PE=1 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 2.143e-72 Identity = 125/199 (62.81%), Postives = 155/199 (77.89%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPITCKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLY 797 +VEM GDEMTR+ W+ IK+KLI P++ELD+ +DLG+ NRDAT+D+VT ++AEA KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE I CKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P+ +K V++F GGVA+ MYN D+SI FA +S A K WPLY Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPKDGTQKVTYMVHDFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLY 208
BLAST of CK936797 vs. ExPASy Swiss-Prot
Match: IDHC_MICOH (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus ochrogaster GN=IDH1 PE=3 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 2.143e-72 Identity = 125/199 (62.81%), Postives = 155/199 (77.89%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPITCKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLY 797 +VEM GDEMTR+ W+ IK+KLI P++ELD+ +DLG+ NRDAT+D+VT ++AEA KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE I CKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P+ +K V++F GGVA+ MYN D+SI FA +S A K WPLY Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPKDGSQKVTYLVHSFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLY 208
BLAST of CK936797 vs. ExPASy Swiss-Prot
Match: IDHP_YEAST (Isocitrate dehydrogenase [NADP], mitochondrial OS=Saccharomyces cerevisiae GN=IDP1 PE=1 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 8.143e-72 Identity = 132/216 (61.11%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 156 TKKKMAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPITCKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKD--EKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLY 797 T + AF KIKV P+VE+DGDEMTR+ W IK KLI P+L++D+KY+DL + +RDAT DK+T ++AEA KY V IKCATITPDEARVKEF L +MWKSPNGTIRNIL GTVFREPI +PRL+P W KPI IGRHA GDQY+ATDT+I GPG L+LV+ P + L+VY++ G GVA++MYNTDESI FA +S A KK L+ Sbjct: 11 TSRLAAFSKIKVKQPVVELDGDEMTRIIWDKIKKKLILPYLDVDLKYYDLSVESRDATSDKITQDAAEAIKKYGVGIKCATITPDEARVKEFNLHKMWKSPNGTIRNILGGTVFREPIVIPRIPRLVPRWEKPIIIGRHAHGDQYKATDTLIPGPGSLELVYKPSDPTTAQPQTLKVYDYKG-SGVAMAMYNTDESIEGFAHSSFKLAIDKKLNLF 225
BLAST of CK936797 vs. ExPASy Swiss-Prot
Match: IDH_MYCTU (Isocitrate dehydrogenase [NADP] OS=Mycobacterium tuberculosis GN=icd PE=3 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 3.421e-70 Identity = 125/206 (60.68%), Postives = 153/206 (74.27%), Query Frame = 3 Query: 180 KIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPITCKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLY 797 KIKV+ P+VE+DGDEMTRV WK IKD LI P+L++ + Y+DLG+ +RDATDD+VT+++A A K+ V +KCATITPDEARV+EF LK+MW SPNGTIRNIL GT+FREPI NVPRL+PGWTKPI IGRHAFGDQYRAT+ + PG + L F P E+ + +GGV L MYN ESIR FA AS + KWP+Y Sbjct: 6 KIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVEEFNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATNFKVDQPGTVTLTFTPADGSAPIVHEMVSIPEDGGVVLGMYNFKESIRDFARASFSYGLNAKWPVY 211
BLAST of CK936797 vs. ExPASy Swiss-Prot
Match: IDH_MYCBO (Isocitrate dehydrogenase [NADP] OS=Mycobacterium bovis GN=icd PE=3 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 3.421e-70 Identity = 125/206 (60.68%), Postives = 153/206 (74.27%), Query Frame = 3 Query: 180 KIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPITCKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLY 797 KIKV+ P+VE+DGDEMTRV WK IKD LI P+L++ + Y+DLG+ +RDATDD+VT+++A A K+ V +KCATITPDEARV+EF LK+MW SPNGTIRNIL GT+FREPI NVPRL+PGWTKPI IGRHAFGDQYRAT+ + PG + L F P E+ + +GGV L MYN ESIR FA AS + KWP+Y Sbjct: 6 KIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVEEFNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATNFKVDQPGTVTLTFTPADGSAPIVHEMVSIPEDGGVVLGMYNFKESIRDFARASFSYGLNAKWPVY 211
BLAST of CK936797 vs. ExPASy Swiss-Prot
Match: IDHC_DICDI (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Dictyostelium discoideum GN=idhC PE=1 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.300e-69 Identity = 124/207 (59.90%), Postives = 154/207 (74.40%), Query Frame = 3 Query: 177 QKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPITCKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLY 797 +KI V+NP+ + GDE TRV W I+ KLIFPFL+L ++ +DLG+ RD T+D+VT+++A A + V IKCATITPDEARV EF LK+MWKSPNGTIRN L GT+FREPI CKNVPRL+ W K I IGRHAFGDQYRATD V++G GKL+L + P + +V++F +GGVAL MYNTD SI+ FA A N + KKWPLY Sbjct: 3 EKIIVSNPVANLLGDEQTRVIWDLIEKKLIFPFLDLKVETYDLGIEYRDKTNDQVTIDAANAIKRLKVGIKCATITPDEARVTEFGLKEMWKSPNGTIRNTLGGTLFREPIVCKNVPRLVTCWNKSIVIGRHAFGDQYRATDFVVKGAGKLELTYTPADGSAPQKFQVFDFPSDGGVALGMYNTDASIKEFAYACFNFSLDKKWPLY 209
BLAST of CK936797 vs. ExPASy Swiss-Prot
Match: IDH_SPHYA (Isocitrate dehydrogenase [NADP] OS=Sphingomonas yanoikuyae GN=icd PE=3 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 2.218e-69 Identity = 123/206 (59.71%), Postives = 157/206 (76.21%), Query Frame = 3 Query: 180 KIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPITCKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLY 797 KIKV NP+VE+DGDEMTR+ W+ I+++LI P+L++D+KY+DL + RD T D++T+++A A +Y V +KCATITPDEARV+EF LK+MWKSPNGTIRNIL G VFREPI KNVPRL+PGWT PI +GRHAFGDQY+ATD + G G L + +V E+ E EV+ F GVA+ MYN DESIR FA+AS N + WP+Y Sbjct: 3 KIKVKNPVVEIDGDEMTRIIWEWIRERLILPYLDVDLKYYDLSVEKRDETSDQITIDAANAIKEYGVGVKCATITPDEARVEEFGLKKMWKSPNGTIRNILGGVVFREPIVIKNVPRLVPGWTDPIVVGRHAFGDQYKATDFKVPGAGTLTMKWVGT-NGEELEYEVFEFP-SAGVAMGMYNLDESIRDFAKASFNYGLNRGWPVY 206 The following BLAST results are available for this feature:
BLAST of CK936797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK936797 ID=CK936797; Name=CK936797; organism=Citrus sinensis; type=EST; length=799bpback to top |