CK936796

Overview
NameCK936796
Unique NameCK936796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_NOSP7 (Phosphoglycerate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=pgk PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 9.792e-43
Identity = 89/135 (65.93%), Postives = 101/135 (74.81%), Query Frame = 3
Query:  363 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            M+KKS+  LS AD+ GK+  VR D NVP+DD   ITDDTRIRAA+PTI+ L Q GAKVIL+SH GRPKGV  K  L P+  RLSELLG +V+K DD IG EV   VA+L  G VLLLENVRFY EEEKND EFAK
Sbjct:    1 MSKKSLASLSSADISGKRALVRVDFNVPVDDQGKITDDTRIRAALPTIQDLTQKGAKVILASHFGRPKGVDDKLRLTPVAKRLSELLGQEVIKTDDSIGDEVAAKVAALQNGQVLLLENVRFYPEEEKNDAEFAK 135          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_GLOVI (Phosphoglycerate kinase OS=Gloeobacter violaceus GN=pgk PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.150e-41
Identity = 88/135 (65.19%), Postives = 100/135 (74.07%), Query Frame = 3
Query:  363 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            MAKK+V  L  ADLKGK+  VR D NVPLD++  ITDDTRIRAA+PTI  L   GA+VIL SHLGRPKG   +  L P+  RL ELLG  V KADD IGPEVE+ V  L +G VLLLENVRFY EEEKN+PEFA+
Sbjct:    1 MAKKTVEALGAADLKGKRALVRVDFNVPLDESGQITDDTRIRAALPTIGMLTGGGARVILVSHLGRPKGFDDQLRLTPVAKRLGELLGQTVYKADDVIGPEVEEAVKKLEDGDVLLLENVRFYPEEEKNNPEFAQ 135          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_CARHZ (Phosphoglycerate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=pgk PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.197e-40
Identity = 85/136 (62.50%), Postives = 108/136 (79.41%), Query Frame = 3
Query:  363 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            M KKS+ ++   ++KGKKVFVR D NVPL++N+ ITDDTRIRAA+PT+++L + GAK+I++SHLGRPKG    K+SL P+  RL+ELLGI+V  A D +GPEVEK+   L  G VLLLENVRFY EEEKNDPEFA+
Sbjct:    1 MNKKSIRDV---EVKGKKVFVRVDFNVPLNENREITDDTRIRAALPTLQYLREQGAKLIVASHLGRPKGQFNEKYSLKPVAKRLAELLGIEVKMAPDVVGPEVEKMAGELRPGEVLLLENVRFYPEEEKNDPEFAR 133          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_SYMTH (Phosphoglycerate kinase OS=Symbiobacterium thermophilum GN=pgk PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.042e-40
Identity = 86/123 (69.92%), Postives = 100/123 (81.30%), Query Frame = 3
Query:  399 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV-TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFA 764
            D+KGK+VFVR D NVPL+D + ITDDTRIRAAVPTI++L++ GA  +L+SHLGRPKG    K+SLAP   RLSELLG +VV A DCIG EVE+LVA  P G V+LLENVRFY EEEKNDPEFA
Sbjct:   10 DVKGKRVFVRVDFNVPLEDGR-ITDDTRIRAAVPTIRYLVEEGAVAVLASHLGRPKGQRNEKYSLAPCARRLSELLGREVVFAPDCIGEEVERLVAEQPPGSVVLLENVRFYAEEEKNDPEFA 131          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_SYNP2 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=pgk PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.483e-40
Identity = 86/136 (63.24%), Postives = 101/136 (74.26%), Query Frame = 3
Query:  363 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            MAKKSV  L+ ADL GK+VFVR D NVPL+++  ITDDTRIRAA+PTIK+L + GAKVIL SH+GRPKG V     L P+  RLSELLG  V K DDC+G  V + +A+L  G V LLEN+RF   EEKNDPEFAK
Sbjct:    1 MAKKSVANLTEADLSGKRVFVRVDFNVPLNESGVITDDTRIRAALPTIKYLTEKGAKVILGSHMGRPKGQVVDSMRLTPVAARLSELLGQSVTKCDDCVGDAVNQAIANLGNGQVALLENLRFNPGEEKNDPEFAK 136          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_DICTD (Phosphoglycerate kinase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=pgk PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.257e-39
Identity = 85/135 (62.96%), Postives = 101/135 (74.81%), Query Frame = 3
Query:  363 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            MAKK++ +L   DLKGK+V VR D NVPL  N  ITDD RIR A+PTIK+L+  GAKVIL SHLGRPKG      L P+  RLSELLG  V K +DCIG EVE+ ++++ EG V+LLEN+RFYKEEE NDPEFAK
Sbjct:    1 MAKKTILDLRDEDLKGKRVLVRVDFNVPLK-NGVITDDRRIREALPTIKYLMDKGAKVILVSHLGRPKGFQDDLRLDPVAKRLSELLGKPVKKLNDCIGEEVEREISNMKEGDVILLENIRFYKEEEANDPEFAK 134          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_DICT6 (Phosphoglycerate kinase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=pgk PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.257e-39
Identity = 85/135 (62.96%), Postives = 101/135 (74.81%), Query Frame = 3
Query:  363 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            MAKK++ +L   +LKGK+V VR D NVP+  N  ITDD RIR A+PTIK+LI  GAKVIL SHLGRPKG      L P+  RLSELLG  V K +DCIG EVEK ++++ EG V+LLEN+RFYKEEE NDPEFAK
Sbjct:    1 MAKKTILDLQDEELKGKRVLVRVDFNVPIK-NGVITDDRRIREALPTIKYLIDRGAKVILVSHLGRPKGFQDDLRLDPVAKRLSELLGKPVKKLNDCIGEEVEKEISNMKEGDVVLLENIRFYKEEEANDPEFAK 134          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_CYAP4 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=pgk PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.257e-39
Identity = 88/141 (62.41%), Postives = 100/141 (70.92%), Query Frame = 3
Query:  363 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG------VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            M+KK+V  LS ADL GK+V VR D NVPLDD   ITDDTRIRAA+PTI+ L   GAKVILSSH GRPKG      V  KF L P+  RLSELLG  V K +DCIG EV+  VA++  G VLLLENVRF+  EE N PEFA+
Sbjct:    1 MSKKTVANLSAADLAGKRVLVRVDFNVPLDDQGKITDDTRIRAALPTIQDLTSKGAKVILSSHFGRPKGETFAERVKDKFRLTPVAARLSELLGKPVPKPNDCIGEEVKAQVAAMQNGDVLLLENVRFHPGEEANTPEFAQ 141          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_SYNY3 (Phosphoglycerate kinase OS=Synechocystis sp. (strain PCC 6803) GN=pgk PE=3 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.948e-39
Identity = 87/136 (63.97%), Postives = 100/136 (73.53%), Query Frame = 3
Query:  363 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            ++K+S+  L+ ADL GK+VFVR D NVPLD N +ITDDTRIRAA+PTIK L+  GAKVIL SH GRPKG V     L P+  RL ELLG  VVK DDCIG EV   +ASLP GGV LLEN+RF+  EE ND EFAK
Sbjct:    2 LSKQSIANLTEADLAGKRVFVRVDFNVPLD-NGSITDDTRIRAALPTIKDLLSKGAKVILGSHFGRPKGKVVDSMRLTPVGDRLGELLGQPVVKCDDCIGAEVTAKIASLPNGGVALLENLRFHAGEEGNDAEFAK 136          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_GEOSF (Phosphoglycerate kinase OS=Geobacter sp. (strain FRC-32) GN=pgk PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.850e-39
Identity = 81/123 (65.85%), Postives = 98/123 (79.67%), Query Frame = 3
Query:  399 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFA 764
            DL+ K VF+R D NVP DDN NIT+DTRI  AVPTIK+ I+NGAKVIL+SHLGRPKG   PK+++AP   RLSELLG +V +A DC GP+V+ +VA+L  G VL+LENVRFY  EEKNDP+FA
Sbjct:   11 DLREKLVFIRVDFNVPQDDNGNITEDTRIVGAVPTIKYAIENGAKVILASHLGRPKGEKKPKYTMAPAARRLSELLGKEVKQATDCFGPDVDAMVAALQPGDVLMLENVRFYPGEEKNDPDFA 133          
The following BLAST results are available for this feature:
BLAST of CK936796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_NOSP79.792e-4365.93Phosphoglycerate kinase OS=Nostoc punctiforme (str... [more]
PGK_GLOVI3.150e-4165.19Phosphoglycerate kinase OS=Gloeobacter violaceus G... [more]
PGK_CARHZ1.197e-4062.50Phosphoglycerate kinase OS=Carboxydothermus hydrog... [more]
PGK_SYMTH2.042e-4069.92Phosphoglycerate kinase OS=Symbiobacterium thermop... [more]
PGK_SYNP23.483e-4063.24Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_DICTD2.257e-3962.96Phosphoglycerate kinase OS=Dictyoglomus turgidum (... [more]
PGK_DICT62.257e-3962.96Phosphoglycerate kinase OS=Dictyoglomus thermophil... [more]
PGK_CYAP42.257e-3962.41Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_SYNY32.948e-3963.97Phosphoglycerate kinase OS=Synechocystis sp. (stra... [more]
PGK_GEOSF3.850e-3965.85Phosphoglycerate kinase OS=Geobacter sp. (strain F... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004517_H08 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_H08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936796 ID=CK936796; Name=CK936796; organism=Citrus sinensis; type=EST; length=767bp
GGGGGCTCTTCACGTCCACATCTTCTTCATCTTCCCCACACATTTTCCTT
CCCCATTCTTCAATCAAACCAAAACCCACTTCCCATTTCTCCACTTTGTC
GACAAAGTTTCAATCTTTTGCGCCTTTACTACGCCACTCCACTCCCACCA
CATCAATGGCTTCAGCCACCGCTCCCACTACTTTATCTCTCGTCAAAACC
GCCGCAAGTTCATCCCTTTCTTCCCCACGCGCCTCCTTCCTGCGCATGCC
CACTTCAGCATCCCGCAGGCTGGGGTTCTCCGCAGCCGACCCGCTGCTGA
CCTGCCATGTGGCGTCGAGGCTGAGCTCGATTAAGACGAAGGGCACTCGT
GCGGTGGTGCCGATGGCGAAGAAGAGCGTGGGGGAGTTGAGTGGAGCTGA
TTTGAAAGGGAAGAAGGTGTTTGTAAGAGCTGACTTGAATGTGCCTTTGG
ATGATAATCAGAACATTACTGACGATACTAGAATCAGAGCTGCTGTTCCC
ACCATCAAGCATTTGATTCAAAATGGAGCTAAAGTCATTCTTTCTAGCCA
CTTGGGAAGACCAAAGGGTGTTACTCCGAAATTCAGTTTGGCTCCTCTTG
TGCCTCGTCTTTCTGAACTCCTGGGCATTCAGGTTGTGAAGGCTGATGAC
TGCATTGGTCCAGAGGTAGAAAAGCTTGTAGCCTCACTTCCTGAAGGCGG
TGTTCTTCTTCTTGAAAACGTGAGGTTCTACAAAGAGGAGGAAAAAAACG
ATCCTGAGTTTGCCAAG
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