CK936796

Overview
NameCK936796
Unique NameCK936796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_CLOPE (Phosphoglycerate kinase OS=Clostridium perfringens GN=pgk PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.242e-29
Identity = 69/130 (53.08%), Postives = 91/130 (70.00%), Query Frame = 3
Query:  387 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKA--DDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            +    +KGKKV VR D NVPL D   ITD+ R+  A+PTIK+L+ NGAKVIL SH+G+PKG   P+FSLAP+  RLSE+LG +VV A  D+ +G   +K VA + +G V+LL+N R+ KEE KN  E +K
Sbjct:    8 IEDVQVKGKKVLVRCDFNVPLKDGV-ITDENRLNGAMPTIKYLVDNGAKVILCSHMGKPKGEAKPEFSLAPVAKRLSEMLGKEVVFAADDNVVGENAKKAVAEMKDGDVVLLQNTRYRKEETKNGEELSK 136          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_CLOP1 (Phosphoglycerate kinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.242e-29
Identity = 69/130 (53.08%), Postives = 91/130 (70.00%), Query Frame = 3
Query:  387 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKA--DDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            +    +KGKKV VR D NVPL D   ITD+ R+  A+PTIK+L+ NGAKVIL SH+G+PKG   P+FSLAP+  RLSE+LG +VV A  D+ +G   +K VA + +G V+LL+N R+ KEE KN  E +K
Sbjct:    8 IEDVQVKGKKVLVRCDFNVPLKDGV-ITDENRLNGAMPTIKYLVDNGAKVILCSHMGKPKGEAKPEFSLAPVAKRLSEMLGKEVVFAADDNVVGENAKKAVAEMKDGDVVLLQNTRYRKEETKNGEELSK 136          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_RUBXD (Phosphoglycerate kinase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=pgk PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.621e-29
Identity = 74/135 (54.81%), Postives = 93/135 (68.89%), Query Frame = 3
Query:  363 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFA 764
            M K+SV +L   +L+GKKV VR D NVP+   + +TDDTRIR A+PTI++L+Q GA+V L SHLGRPKG   P++ + P+  RL ELLG  V K D   GPEV + +  L E GV+LLEN RFY  E KNDP FA
Sbjct:    1 MDKRSVRDL---ELRGKKVLVRVDFNVPVKGGE-VTDDTRIRRALPTIRYLLQRGARVALISHLGRPKGEPDPRYRMDPVARRLEELLGEPVRKLDTATGPEVGRALEEL-ERGVILLENSRFYPGETKNDPAFA 130          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_GLUOX (Phosphoglycerate kinase OS=Gluconobacter oxydans GN=pgk PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.621e-29
Identity = 64/128 (50.00%), Postives = 87/128 (67.97%), Query Frame = 3
Query:  387 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            L G D +GK+V VRADLNVP+ D   ITDDTR++   PTI+ L+  GA+V++ SH  RPKG V P  SL P+  +L ++LG  V    +C+GP VE  V ++ +G +++LEN RF+  EE NDPEFAK
Sbjct:    6 LDGVDARGKRVLVRADLNVPMHDGV-ITDDTRLQRVAPTIRELVDKGARVVVFSHFDRPKGQVVPAMSLRPIALKLGQILGQPVGFVAECVGPTVEAAVGAMADGDIIVLENTRFHAGEEANDPEFAK 132          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_CAMHC (Phosphoglycerate kinase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=pgk PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.621e-29
Identity = 66/122 (54.10%), Postives = 86/122 (70.49%), Query Frame = 3
Query:  405 KGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPK-GVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            KG+KVF+R D NVP+D+  NITDD RIRAA+PTI++ +  G  VIL+SHLGRPK G   KFSL P+  RL+  +  ++   +D IG E  + V +L E  VLLL+N+RF K E KNDPEFA+
Sbjct:   14 KGEKVFIRCDFNVPMDEFLNITDDRRIRAAIPTIRYCLDEGCSVILASHLGRPKNGYEAKFSLEPVAKRLARRMNREIKFVNDVIGKEAVEAVKNLKENEVLLLDNLRFEKGETKNDPEFAQ 135          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_STRCO (Phosphoglycerate kinase OS=Streptomyces coelicolor GN=pgk PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.118e-29
Identity = 73/133 (54.89%), Postives = 89/133 (66.92%), Query Frame = 3
Query:  372 KSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVT-PKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYK-EEEKNDPEFA 764
            K++ EL    + GK+VFVRADLNVPLD    ITDD RIRA VPT+K L   GA+VI++SHLGRPKG   P FSLAP   RL ELLG  V  A+D +G   E +V  L +GGV ++EN+RF   E  K+D E A
Sbjct:    2 KTIDELLSEGVAGKRVFVRADLNVPLDGT-TITDDGRIRAVVPTVKALADAGARVIVASHLGRPKGAPDPAFSLAPAAARLGELLGADVAFAEDTVGSSAEAVVTGLADGGVAVIENLRFNAGETSKDDAERA 133          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_NEUCR (Phosphoglycerate kinase OS=Neurospora crassa GN=pgk-1 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.766e-29
Identity = 65/121 (53.72%), Postives = 86/121 (71.07%), Query Frame = 3
Query:  387 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRPKGV-TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE 743
            +   DLKGK+V +R D NVPLD  + +T+  RI  A+PTIK+ + +GAK V+L SHLGRP G   PK+SL P+VP L +LLG +V  A DC+GPEVE++V     G V+LLEN+RF+ EEE
Sbjct:    9 IEDVDLKGKRVLIRVDFNVPLDAEKKVTNPQRIAGAIPTIKYALDHGAKAVVLMSHLGRPDGKPNPKYSLKPVVPELEKLLGKKVTFAPDCVGPEVEEIVNKADNGEVILLENLRFHIEEE 129          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_BORGA (Phosphoglycerate kinase OS=Borrelia garinii GN=pgk PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.766e-29
Identity = 67/121 (55.37%), Postives = 86/121 (71.07%), Query Frame = 3
Query:  408 GKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTP-KFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            GK+  VR D NVPL +  NI+DDTRI+AA+PTI++L + GA+++L SHLGRP+G    K+SL P+  +LSELLG  V    DCIG E+      + +G V+LLENVRFY EEEKND  FAK
Sbjct:   14 GKRALVRCDFNVPLKEG-NISDDTRIKAALPTIEYLKEKGARIVLISHLGRPEGKKNLKYSLKPVANKLSELLGQDVKMLSDCIGREIVNNTLQMKDGDVVLLENVRFYAEEEKNDKNFAK 133          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_CLOPS (Phosphoglycerate kinase OS=Clostridium perfringens (strain SM101 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.612e-29
Identity = 68/130 (52.31%), Postives = 91/130 (70.00%), Query Frame = 3
Query:  387 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKA--DDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            +    +KGKKV VR D NVPL D   ITD+ R+  A+PTIK+L+ NGA+VIL SH+G+PKG   P+FSLAP+  RLSE+LG +VV A  D+ +G   +K VA + +G V+LL+N R+ KEE KN  E +K
Sbjct:    8 IEDVQVKGKKVLVRCDFNVPLKDGV-ITDENRLNGAMPTIKYLVDNGAQVILCSHMGKPKGEAKPEFSLAPVAKRLSEMLGKEVVFAADDNVVGENAKKAVAEMKDGDVVLLQNTRYRKEETKNGEELSK 136          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_CAUCR (Phosphoglycerate kinase OS=Caulobacter crescentus GN=pgk PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.612e-29
Identity = 68/128 (53.12%), Postives = 86/128 (67.19%), Query Frame = 3
Query:  387 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            L  ADL GK+  VR D NVP+D  + + DDTR++AA+PTI+ L   GAKV+L +H  RPKG V P+ SLA +   L+ LLG  V    DC+GP   ++V  L +GGV LLENVRF+  EEKND EFAK
Sbjct:    6 LDTADLAGKRALVRVDFNVPVDGGK-VADDTRLKAALPTIRFLADKGAKVVLLAHFDRPKGKVVPEMSLAFVAEPLAALLGAPVAFVGDCVGPAAAEVVNGLADGGVALLENVRFHAGEEKNDAEFAK 132          
The following BLAST results are available for this feature:
BLAST of CK936796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CLOPE1.242e-2953.08Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_CLOP11.242e-2953.08Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_RUBXD1.621e-2954.81Phosphoglycerate kinase OS=Rubrobacter xylanophilu... [more]
PGK_GLUOX1.621e-2950.00Phosphoglycerate kinase OS=Gluconobacter oxydans G... [more]
PGK_CAMHC1.621e-2954.10Phosphoglycerate kinase OS=Campylobacter hominis (... [more]
PGK_STRCO2.118e-2954.89Phosphoglycerate kinase OS=Streptomyces coelicolor... [more]
PGK_NEUCR2.766e-2953.72Phosphoglycerate kinase OS=Neurospora crassa GN=pg... [more]
PGK_BORGA2.766e-2955.37Phosphoglycerate kinase OS=Borrelia garinii GN=pgk... [more]
PGK_CLOPS3.612e-2952.31Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_CAUCR3.612e-2953.13Phosphoglycerate kinase OS=Caulobacter crescentus ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004517_H08 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_H08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936796 ID=CK936796; Name=CK936796; organism=Citrus sinensis; type=EST; length=767bp
GGGGGCTCTTCACGTCCACATCTTCTTCATCTTCCCCACACATTTTCCTT
CCCCATTCTTCAATCAAACCAAAACCCACTTCCCATTTCTCCACTTTGTC
GACAAAGTTTCAATCTTTTGCGCCTTTACTACGCCACTCCACTCCCACCA
CATCAATGGCTTCAGCCACCGCTCCCACTACTTTATCTCTCGTCAAAACC
GCCGCAAGTTCATCCCTTTCTTCCCCACGCGCCTCCTTCCTGCGCATGCC
CACTTCAGCATCCCGCAGGCTGGGGTTCTCCGCAGCCGACCCGCTGCTGA
CCTGCCATGTGGCGTCGAGGCTGAGCTCGATTAAGACGAAGGGCACTCGT
GCGGTGGTGCCGATGGCGAAGAAGAGCGTGGGGGAGTTGAGTGGAGCTGA
TTTGAAAGGGAAGAAGGTGTTTGTAAGAGCTGACTTGAATGTGCCTTTGG
ATGATAATCAGAACATTACTGACGATACTAGAATCAGAGCTGCTGTTCCC
ACCATCAAGCATTTGATTCAAAATGGAGCTAAAGTCATTCTTTCTAGCCA
CTTGGGAAGACCAAAGGGTGTTACTCCGAAATTCAGTTTGGCTCCTCTTG
TGCCTCGTCTTTCTGAACTCCTGGGCATTCAGGTTGTGAAGGCTGATGAC
TGCATTGGTCCAGAGGTAGAAAAGCTTGTAGCCTCACTTCCTGAAGGCGG
TGTTCTTCTTCTTGAAAACGTGAGGTTCTACAAAGAGGAGGAAAAAAACG
ATCCTGAGTTTGCCAAG
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