CK936796

Overview
NameCK936796
Unique NameCK936796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_THEP1 (Phosphoglycerate kinase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=pgk PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.034e-33
Identity = 76/128 (59.38%), Postives = 92/128 (71.88%), Query Frame = 3
Query:  387 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV-TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            +   DLKGK+V +R D NVP+ D   + DDTRIRAA+PTIK+ ++ GAKVIL SHLGRPKG  +P+FSLAP+  RLSELLG +V      +G EV+K V  L EG VLLLEN RF+  E KNDPE AK
Sbjct:    6 IKDVDLKGKRVIMRVDFNVPVKDGV-VQDDTRIRAALPTIKYALEQGAKVILLSHLGRPKGEPSPEFSLAPVAKRLSELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENTRFHPGETKNDPELAK 132          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_OCEIH (Phosphoglycerate kinase OS=Oceanobacillus iheyensis GN=pgk PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.034e-33
Identity = 76/136 (55.88%), Postives = 97/136 (71.32%), Query Frame = 3
Query:  363 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            M KK++ +L    ++GK+VF R D NVPL D + ITDDTRIRAA+PTI+ L   GAKVIL+SHLGRPKG V  +  L P+  RLS+LLG +V+K D   G EV++ ++ L  GGVLL+ENVRF   EEKNDPE  +
Sbjct:    1 MNKKTINDLQ---VEGKRVFTRVDFNVPLKDGE-ITDDTRIRAALPTIEQLTAQGAKVILASHLGRPKGTVVEELRLDPVADRLSDLLGKEVLKTDQVYGEEVDQAISELENGGVLLIENVRFEAGEEKNDPELVE 132          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_CHLCH (Phosphoglycerate kinase OS=Chlorobium chlorochromatii (strain CaD3) GN=pgk PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.034e-33
Identity = 74/136 (54.41%), Postives = 100/136 (73.53%), Query Frame = 3
Query:  363 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            M KK++ +++    +GK+V +R D NVPLD+N+NITDD RI  ++P+I+ +I+ G ++IL SHLGRPKG V  +FSLAP+  RLSELL   V  A DCIG EV + V +L +G VLLLEN+RF+ EEE ND +FAK
Sbjct:    1 MEKKTLSDIA---TQGKRVLMRVDFNVPLDENKNITDDKRIVESLPSIRKVIEEGGRLILMSHLGRPKGKVNAEFSLAPVAARLSELLDCPVGMAKDCIGTEVMQQVLALQDGEVLLLENLRFHAEEEANDADFAK 133          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_BACTN (Phosphoglycerate kinase OS=Bacteroides thetaiotaomicron GN=pgk PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.034e-33
Identity = 68/112 (60.71%), Postives = 85/112 (75.89%), Query Frame = 3
Query:  408 GKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE 743
            GKK FVR D NVPLD+N NITDDTR+RAA+PT+K ++ +G  +I+ SHLGRPKGV  KFSL  ++  LSELLG++V  A+DC+G E     A+L  G VLLLEN+RFY EEE
Sbjct:   11 GKKAFVRVDFNVPLDENFNITDDTRMRAALPTLKKILADGGSIIIGSHLGRPKGVADKFSLKHIIKHLSELLGVEVQFANDCMGEEAAVKAAALQPGEVLLLENLRFYAEEE 122          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_BACLD (Phosphoglycerate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pgk PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.034e-33
Identity = 73/136 (53.68%), Postives = 100/136 (73.53%), Query Frame = 3
Query:  363 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            M KKSV ++   D+KG+ VF R D NVP+ D + +TDDTRIRAA+PTI++L + GAKV+L+SHLGRPKG V+ +  L P+  RL EL+G +V KAD+  G  V+  ++ + +G +L+LENVRFY  EEKNDPE +K
Sbjct:    1 MNKKSVKDI---DVKGRVVFCRVDFNVPMKDGK-VTDDTRIRAALPTIQYLTEQGAKVLLASHLGRPKGQVSEELRLTPVAARLGELIGKEVKKADEAYGDAVKAQISEMKDGDILVLENVRFYPGEEKNDPELSK 132          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_TRIVI (Phosphoglycerate kinase OS=Trichoderma viride GN=pgk1 PE=3 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 9.186e-33
Identity = 71/121 (58.68%), Postives = 89/121 (73.55%), Query Frame = 3
Query:  387 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE 743
            ++  D+KGK+V +R D NVPLD+N+NIT+  RI  A+PTIKH + NGAK VIL SHLGRP G V  K+SL P+VP+L ELLG  V  A DC+GPEVE +V     G V+LLEN+RF+ EEE
Sbjct:    9 ITDVDVKGKRVLIRVDFNVPLDENKNITNPQRIAGAIPTIKHALDNGAKAVILMSHLGRPNGAVNAKYSLKPVVPKLEELLGKPVTFAPDCVGPEVEAIVNKADNGAVILLENLRFHIEEE 129          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_CHLPD (Phosphoglycerate kinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=pgk PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.186e-33
Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 3
Query:  363 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            M KK++ +++   ++GK+V +R D NVP+D+ +NITDD RI  A+P+IK +I  G ++IL SHLGRPKG V  +FSLAP+  RLSELL   V  A DCIG EV +   +L +G V+LLEN+RF+ EEE N+P+FAK
Sbjct:    1 MQKKTLSDVA---IQGKRVLMRVDFNVPIDEEKNITDDKRIVEALPSIKKIIDGGGRLILMSHLGRPKGKVNAEFSLAPVAHRLSELLDTPVAMAKDCIGTEVMQAALALQDGEVMLLENLRFHAEEEANNPDFAK 133          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGKT_THEMA (Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk/tpi PE=1 SV=4)

HSP 1 Score: 140.584 bits (353), Expect = 9.186e-33
Identity = 76/124 (61.29%), Postives = 91/124 (73.39%), Query Frame = 3
Query:  399 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV-TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            DLKGK+V +R D NVP+ D   + DDTRIRAA+PTIK+ ++ GAKVIL SHLGRPKG  +P+FSLAP+  RLSELLG +V      +G EV+K V  L EG VLLLEN RF+  E KNDPE AK
Sbjct:   10 DLKGKRVIMRVDFNVPVKDGV-VQDDTRIRAALPTIKYALEQGAKVILLSHLGRPKGEPSPEFSLAPVAKRLSELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENTRFHPGETKNDPELAK 132          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_MOOTA (Phosphoglycerate kinase OS=Moorella thermoacetica (strain ATCC 39073) GN=pgk PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.567e-32
Identity = 76/136 (55.88%), Postives = 99/136 (72.79%), Query Frame = 3
Query:  363 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAK 767
            MAK ++ +L   +L  K+V VR D NVPL+  + +TD+TRIRAA+PTI++L+ +GA+VIL SHLGRPKG V  +  L P+   L  LLG QV K +DC+GPEVE   A+L  G VLLLEN+RF+ EEEKNDP FA+
Sbjct:    1 MAKLTLKDL---ELNNKRVLVRVDFNVPLEAGR-VTDNTRIRAALPTIEYLLDHGARVILMSHLGRPKGKVKEELRLDPVARELESLLGRQVHKVNDCVGPEVEAAAAALKPGEVLLLENLRFHPEEEKNDPGFAR 132          
BLAST of CK936796 vs. ExPASy Swiss-Prot
Match: PGK_TRIRE (Phosphoglycerate kinase OS=Trichoderma reesei GN=pgk1 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.046e-32
Identity = 70/121 (57.85%), Postives = 88/121 (72.73%), Query Frame = 3
Query:  387 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE 743
            ++  DLKGK+V +R D NVPLD+N+ IT++ RI  A+PTIKH + NGAK V+L SHLGRP G V PK+SL P+VP L  LLG  V  A DC+GPEVE +V     G V+LLEN+RF+ EEE
Sbjct:    9 ITDVDLKGKRVLIRVDFNVPLDENKKITNNQRIVGAIPTIKHALDNGAKAVVLMSHLGRPNGAVNPKYSLKPVVPELERLLGKPVTFARDCVGPEVESIVNDADNGAVILLENLRFHIEEE 129          
The following BLAST results are available for this feature:
BLAST of CK936796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_THEP17.034e-3359.38Phosphoglycerate kinase OS=Thermotoga petrophila (... [more]
PGK_OCEIH7.034e-3355.88Phosphoglycerate kinase OS=Oceanobacillus iheyensi... [more]
PGK_CHLCH7.034e-3354.41Phosphoglycerate kinase OS=Chlorobium chlorochroma... [more]
PGK_BACTN7.034e-3360.71Phosphoglycerate kinase OS=Bacteroides thetaiotaom... [more]
PGK_BACLD7.034e-3353.68Phosphoglycerate kinase OS=Bacillus licheniformis ... [more]
PGK_TRIVI9.186e-3358.68Phosphoglycerate kinase OS=Trichoderma viride GN=p... [more]
PGK_CHLPD9.186e-3352.94Phosphoglycerate kinase OS=Chlorobium phaeobactero... [more]
PGKT_THEMA9.186e-3361.29Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk... [more]
PGK_MOOTA1.567e-3255.88Phosphoglycerate kinase OS=Moorella thermoacetica ... [more]
PGK_TRIRE2.046e-3257.85Phosphoglycerate kinase OS=Trichoderma reesei GN=p... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004517_H08 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_H08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936796 ID=CK936796; Name=CK936796; organism=Citrus sinensis; type=EST; length=767bp
GGGGGCTCTTCACGTCCACATCTTCTTCATCTTCCCCACACATTTTCCTT
CCCCATTCTTCAATCAAACCAAAACCCACTTCCCATTTCTCCACTTTGTC
GACAAAGTTTCAATCTTTTGCGCCTTTACTACGCCACTCCACTCCCACCA
CATCAATGGCTTCAGCCACCGCTCCCACTACTTTATCTCTCGTCAAAACC
GCCGCAAGTTCATCCCTTTCTTCCCCACGCGCCTCCTTCCTGCGCATGCC
CACTTCAGCATCCCGCAGGCTGGGGTTCTCCGCAGCCGACCCGCTGCTGA
CCTGCCATGTGGCGTCGAGGCTGAGCTCGATTAAGACGAAGGGCACTCGT
GCGGTGGTGCCGATGGCGAAGAAGAGCGTGGGGGAGTTGAGTGGAGCTGA
TTTGAAAGGGAAGAAGGTGTTTGTAAGAGCTGACTTGAATGTGCCTTTGG
ATGATAATCAGAACATTACTGACGATACTAGAATCAGAGCTGCTGTTCCC
ACCATCAAGCATTTGATTCAAAATGGAGCTAAAGTCATTCTTTCTAGCCA
CTTGGGAAGACCAAAGGGTGTTACTCCGAAATTCAGTTTGGCTCCTCTTG
TGCCTCGTCTTTCTGAACTCCTGGGCATTCAGGTTGTGAAGGCTGATGAC
TGCATTGGTCCAGAGGTAGAAAAGCTTGTAGCCTCACTTCCTGAAGGCGG
TGTTCTTCTTCTTGAAAACGTGAGGTTCTACAAAGAGGAGGAAAAAAACG
ATCCTGAGTTTGCCAAG
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