CK936791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NUOA_PSYA2 (NADH-quinone oxidoreductase subunit A OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=nuoA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.250e-13 Identity = 35/109 (32.11%), Postives = 65/109 (59.63%), Query Frame = 3 Query: 249 AFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 AF++ + + + ++ +L + G +K +E+G+ G+A ++ ++Y+ A+ FV+FD+E ++LY +A+S G F A IF+ ILI+GLVY GA+ W+ Sbjct: 10 AFILAAIALVVFMLVVPRLLGGRSHGSQKEEIFEAGVVGSGNARIRLSAKFYLVAIFFVIFDLEALYLYAYAVSVREAGWLGFAAAAIFITILIIGLVYELSLGAMNWA 118
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_PERPL (NADH-ubiquinone oxidoreductase chain 3 OS=Peromyscus polionotus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.250e-13 Identity = 36/109 (33.03%), Postives = 64/109 (58.72%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 L+++ + +L +I+ L +N EK + YE G +PMG A L F +++++ A+ F++FD+E L PWA+ + + + AFI + +L +GL Y W + LEW+ Sbjct: 7 LLVNITLSMLLIIIAFWLPQLNLYTEKANPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQMYYINI-MMSTAFILVSVLALGLAYEWLQKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_PERMA (NADH-ubiquinone oxidoreductase chain 3 OS=Peromyscus maniculatus GN=MT-ND3 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 7.250e-13 Identity = 35/109 (32.11%), Postives = 65/109 (59.63%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 L+++ + +L +++ L +N EK + YE G +PMG A L F +++++ A+ F++FD+E L PWA+ + + + + AFI + +L +GL Y W + LEW+ Sbjct: 7 LLVNITLSMLLIIVAFWLPQLNLYTEKANPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQMYNIDI-MMLTAFILVSVLALGLAYEWLQKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NUOA_ACICJ (NADH-quinone oxidoreductase subunit A OS=Acidiphilium cryptum (strain JF-5) GN=nuoA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.468e-13 Identity = 36/113 (31.86%), Postives = 60/113 (53.10%), Query Frame = 3 Query: 243 FWAFLIISSVIPILA---FLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 572 +W L+ + V+ L +S L + + +ESGI +G A + +++Y+ A+ FV+FD+E +LY WA + G ++ +F+L L+ L Y WR GALEW Sbjct: 7 YWVLLVYTFVVIALVAGMIGVSHFLGQRHLKRATIEPFESGIVTVGYARFRLPVQFYLIAMFFVIFDLEAAYLYAWATAVHAAGWTGYLVIAVFILALLAALAYLWRAGALEW 119
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_MICPE (NADH-ubiquinone oxidoreductase chain 3 OS=Microtus pennsylvanicus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.468e-13 Identity = 42/111 (37.84%), Postives = 63/111 (56.76%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAV--LAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 LI+ I + A LIS L +N EK + YE G +PM A L F +++++ A+ F++FD+E L PWAM F + + + AFI + IL +GL Y W + LEW+ Sbjct: 5 LILLMNIALAAILISLAFWLPHLNVYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQFPNMNM-LMTMAFILITILALGLAYEWTQKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_ISTPI (NADH-ubiquinone oxidoreductase chain 3 OS=Isthmomys pirrensis GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.468e-13 Identity = 37/109 (33.94%), Postives = 63/109 (57.80%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 L+I+ + + I+ L +N EK S YE G +PM A L F +++++ A+ F++FD+E L PWAM + + V + + +FI + +L +GL Y W + LEW+ Sbjct: 7 LLINITLSLCLITIAFWLPQLNMYTEKASPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQINNIKV-MMLTSFILVSVLALGLAYEWMQKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NUOA_BUCAP (NADH-quinone oxidoreductase subunit A OS=Buchnera aphidicola subsp. Schizaphis graminum GN=nuoA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12 Identity = 40/118 (33.90%), Postives = 65/118 (55.08%), Query Frame = 3 Query: 219 FLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 572 +L + Y IF++ ++ FL L+ P +ESG+ +G+ L F +++Y+ A+ FV+FDVE ++LY W++S G F+EA IF+L L++ L Y R AL W Sbjct: 11 YLSFLYFIFFSLFFCCFMLFTSWFLGGRSLSRYKNTP-----FESGVVSVGNTHLHFSVKFYLIAIFFVIFDVEALYLYAWSVSIVESGWIGFVEATIFILFLLLSLFYLVRIKALNW 123
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_SQUAC (NADH-ubiquinone oxidoreductase chain 3 OS=Squalus acanthias GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12 Identity = 39/113 (34.51%), Postives = 66/113 (58.41%), Query Frame = 3 Query: 255 LIISSV-----IPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPV-FIEAFIFMLILIVGLVYAWRKGALEWS 575 LI+SSV I ++ ++ L +N EKLS YE G +P+G A L F +R+++ A++F++FD+E L P +L + + A +++L +GL+Y W +G LEW+ Sbjct: 3 LIMSSVAATALISLILAFVAFWLPSLNPDNEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGNQLLTPSISLLWATSIIILLTLGLIYEWLQGGLEWA 115
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_PERME (NADH-ubiquinone oxidoreductase chain 3 OS=Peromyscus melanotis GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12 Identity = 35/109 (32.11%), Postives = 64/109 (58.72%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 L+++ + L +++ L +N EK + YE G +PMG A L F +++++ A+ F++FD+E L PWA+ + + + + AFI + +L +GL Y W + LEW+ Sbjct: 7 LLVNITLSTLLIIVAFWLPQLNLYTEKANPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQMYNINI-MMLTAFILVSVLALGLAYEWVQKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_ANOQU (NADH-ubiquinone oxidoreductase chain 3 OS=Anopheles quadrimaculatus GN=ND3 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12 Identity = 38/107 (35.51%), Postives = 63/107 (58.88%), Query Frame = 3 Query: 258 IISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVF-IEAFIFMLILIVGLVYAWRKGALEWS 575 II+ V+ +LA L+S EK S +E G +PM + L F +R+++ A++F++FDVE L P M + + + +F F+ IL++GL + W +GALEW+ Sbjct: 13 IITIVVMMLATLLSKKTL---LDREKCSPFECGFDPMNSSRLPFALRFFLIAIIFLIFDVEIALLLPMVMIIKTSNLMNWTMTSFFFIFILLIGLYHEWNQGALEWN 116 The following BLAST results are available for this feature:
BLAST of CK936791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936791 ID=CK936791; Name=CK936791; organism=Citrus sinensis; type=EST; length=627bpback to top |