CK936791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_MACRO (NADH-ubiquinone oxidoreductase chain 3 OS=Macropus robustus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.699e-12 Identity = 37/109 (33.94%), Postives = 62/109 (56.88%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 LII++ + + LI+ L + EK S YE G +P+G A L F +++++ A+ F++FD+E L PWAM + + + A+ +++L GL Y W + LEWS Sbjct: 8 LIINTALSTIIVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWAMQLPTPNLTLIL-AYCLIILLTAGLAYEWIQKGLEWS 115
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_DROYA (NADH-ubiquinone oxidoreductase chain 3 OS=Drosophila yakuba GN=mt:ND3 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.699e-12 Identity = 34/115 (29.57%), Postives = 68/115 (59.13%), Query Frame = 3 Query: 246 WAFLIISSVIPILAFLISAVLAPINKGP----EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVF-IEAFIFMLILIVGLVYAWRKGALEWS 575 ++ +II+SVI ++ ++ + + ++K EK S +E G +P + L F +R+++ ++F++FDVE + P + + ++ I + IF+LIL++GL + W +G L WS Sbjct: 2 FSIIIIASVILLITTVVMFLASILSKKALIDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIILKYSNIMIWTITSIIFILILLIGLYHEWNQGMLNWS 116
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NUOA_GLUDA (NADH-quinone oxidoreductase subunit A OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=nuoA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.137e-12 Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 3 Query: 345 YESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 572 +ESG+ P+G A L+ ++YY+ A++FV+FDVE+VFL+ WA G + +F+ L L Y WR GAL+W Sbjct: 51 FESGVLPVGSAHLRIPVQYYLVAMLFVIFDVESVFLFSWAPVAVGAGWRGYGAVVVFVASLAAALAYVWRWGALDW 126
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_SOLTU (NADH-ubiquinone oxidoreductase chain 3 OS=Solanum tuberosum GN=ND3 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.137e-12 Identity = 40/108 (37.04%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 252 FLIIS---SVIPI-LAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGA 563 +L+IS S+IP+ L FL S+ + PEK S+YE G++P GDA + IR+Y+ +++F++ D E F +PWA+ + + F+LIL +G +Y W++GA Sbjct: 10 YLVISPLVSLIPLGLPFLFSSNSSTY---PEKSSAYECGLDPSGDARSRVDIRFYLVSILFIIPDPEVTFSFPWAVPPNKIDPFGSWSMMAFLLILTIGSLYEWKRGA 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_SIGHI (NADH-ubiquinone oxidoreductase chain 3 OS=Sigmodon hispidus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.137e-12 Identity = 36/109 (33.03%), Postives = 61/109 (55.96%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYP--WAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 L I++ + + ++ L +N EK S YE G +P+ A L F +++++ A+ F++FD+E L P WA+ L + I +FI + IL +GL+Y W LEW+ Sbjct: 7 LFINASLSFILISVAFWLPQLNIYTEKASPYECGFDPLSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQITKLSA-MMITSFILISILALGLIYEWMNKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_REIFU (NADH-ubiquinone oxidoreductase chain 3 OS=Reithrodontomys fulvescens GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.137e-12 Identity = 34/109 (31.19%), Postives = 63/109 (57.80%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 ++I+ ++ + +I+ L +N EK + YE G +PM A L F +++++ A+ F++FD+E L PWA+ + + + AFI + +L +GL Y W + LEW+ Sbjct: 7 MMINIILSMSLIIIAFWLPQLNLYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQIPNIKI-TMLTAFILVTVLALGLAYEWMQKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NUOA_ACIBY (NADH-quinone oxidoreductase subunit A OS=Acinetobacter baumannii (strain AYE) GN=nuoA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.015e-12 Identity = 35/109 (32.11%), Postives = 62/109 (56.88%), Query Frame = 3 Query: 249 AFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 AF+I + + + + +L + G K +ESG+ G A ++ ++Y+ A+ FVVFD+E ++LY W+ S +G + IF++ L++ LVYA+ GAL W+ Sbjct: 13 AFVIGVTFLCVFMLTVPLLLGGKSWGRAKQEQFESGVVSAGGARIRLSAKFYLVAIFFVVFDLEALYLYAWSTSVREVGWLGYTTVVIFVVDLLIALVYAFSVGALSWA 121
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NUOA_ACIBT (NADH-quinone oxidoreductase subunit A OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=nuoA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.015e-12 Identity = 35/109 (32.11%), Postives = 62/109 (56.88%), Query Frame = 3 Query: 249 AFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 AF+I + + + + +L + G K +ESG+ G A ++ ++Y+ A+ FVVFD+E ++LY W+ S +G + IF++ L++ LVYA+ GAL W+ Sbjct: 13 AFVIGVTFLCVFMLTVPLLLGGKSWGRAKQEQFESGVVSAGGARIRLSAKFYLVAIFFVVFDLEALYLYAWSTSVREVGWLGYTTVVIFVVDLLIALVYAFSVGALSWA 121
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NUOA_ACIBS (NADH-quinone oxidoreductase subunit A OS=Acinetobacter baumannii (strain SDF) GN=nuoA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.015e-12 Identity = 35/109 (32.11%), Postives = 62/109 (56.88%), Query Frame = 3 Query: 249 AFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 AF+I + + + + +L + G K +ESG+ G A ++ ++Y+ A+ FVVFD+E ++LY W+ S +G + IF++ L++ LVYA+ GAL W+ Sbjct: 13 AFVIGVTFLCVFMLTVPLLLGGKSWGRAKQEQFESGVVSAGGARIRLSAKFYLVAIFFVVFDLEALYLYAWSTSVREVGWLGYTTVVIFVVDLLIALVYAFSVGALSWA 121
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NUOA_ACIBC (NADH-quinone oxidoreductase subunit A OS=Acinetobacter baumannii (strain ACICU) GN=nuoA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.015e-12 Identity = 35/109 (32.11%), Postives = 62/109 (56.88%), Query Frame = 3 Query: 249 AFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 AF+I + + + + +L + G K +ESG+ G A ++ ++Y+ A+ FVVFD+E ++LY W+ S +G + IF++ L++ LVYA+ GAL W+ Sbjct: 13 AFVIGVTFLCVFMLTVPLLLGGKSWGRAKQEQFESGVVSAGGARIRLSAKFYLVAIFFVVFDLEALYLYAWSTSVREVGWLGYTTVVIFVVDLLIALVYAFSVGALSWA 121 The following BLAST results are available for this feature:
BLAST of CK936791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936791 ID=CK936791; Name=CK936791; organism=Citrus sinensis; type=EST; length=627bpback to top |