CK936791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_PARLI (NADH-ubiquinone oxidoreductase chain 3 OS=Paracentrotus lividus GN=ND3 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.015e-12 Identity = 38/106 (35.85%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 261 ISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPW-AMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 I+S + I+ L + +L N EK S YE G +P+ A L F R+++ A++F++FD+E L+P A SF + + + FM IL GLV+ W LEW+ Sbjct: 11 ITSAVAIIFALAAHILPTRNNDGEKNSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPAASFLTHPTTLILISLAFMAILDAGLVFEWINPPLEWA 116
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_LUMTE (NADH-ubiquinone oxidoreductase chain 3 OS=Lumbricus terrestris GN=ND3 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.015e-12 Identity = 35/107 (32.71%), Postives = 64/107 (59.81%), Query Frame = 3 Query: 261 ISSVIPILAFLISAVLAPIN-KGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGV-PVFIEAFIFMLILIVGLVYAWRKGALEWS 575 I+ ++PI+ + VLA + + EK S +E G +P A + F R+++ A++F+VFD+E V L P V + +F++IL++GL++ W++G+L+WS Sbjct: 10 IALLVPIIILGAAWVLASRSTEDREKSSPFECGFDPKSTARIPFSTRFFLLAIIFIVFDIEIVLLMPLPTILHTSDVFTTVTTSVLFLMILLIGLIHEWKEGSLDWS 116
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_MAMPR (NADH-ubiquinone oxidoreductase chain 3 OS=Mammuthus primigenius GN=MT-ND3 PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.047e-11 Identity = 36/111 (32.43%), Postives = 65/111 (58.56%), Query Frame = 3 Query: 249 AFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 A L+ ++++ L LI+ L EK S YE G +PMG A L F +++++ A+ F++FD+E L PWA+ + + + + +F+ +++L +GL Y W + LEW+ Sbjct: 5 ATLLTNTMLTSLMVLIAFWLPQTYTYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQANNTNLTLLM-SFMLIILLAIGLAYEWLQKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_EQUAS (NADH-ubiquinone oxidoreductase chain 3 OS=Equus asinus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.047e-11 Identity = 38/109 (34.86%), Postives = 61/109 (55.96%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 L+ ++++ L LI+ L +N EK S YE G +PMG A L F +++++ A+ F++FD+E L PWA L + I A I + +L + L Y W + LEW+ Sbjct: 7 LLTNTLLASLLVLIAFWLPQLNIYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNT-MLIMALILISLLAISLAYEWTQKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_BAITA (NADH-ubiquinone oxidoreductase chain 3 OS=Baiomys taylori GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.047e-11 Identity = 38/109 (34.86%), Postives = 63/109 (57.80%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 +I+SS + ++AF L +N EK + YE G +PM A L F +++++ A+ F++FD+E L PWA+ + + + AFI + IL +GL Y W + LEW+ Sbjct: 11 IILSSTLILVAFW----LPQLNIYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPIPWAIQMPDMKT-MMLTAFILVSILALGLAYEWTQKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_HORSE (NADH-ubiquinone oxidoreductase chain 3 OS=Equus caballus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.367e-11 Identity = 37/109 (33.94%), Postives = 61/109 (55.96%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 L+ ++++ L LI+ L +N EK S YE G +PMG A L F +++++ A+ F++FD+E L PWA L + I A + + +L + L Y W + LEW+ Sbjct: 7 LLTNTLLASLLVLIAFWLPQLNIYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNT-MLIMALVLISLLAISLAYEWTQKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_SCYCA (NADH-ubiquinone oxidoreductase chain 3 OS=Scyliorhinus canicula GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11 Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 3 Query: 255 LIISSVIP------ILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG-VPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 LI+SSV+ ILAF I+ L + EKLS YE G +P+G A L F +R+++ A++F++FD+E L P + + +++L +GL+Y W +G LEW+ Sbjct: 3 LIMSSVVATALVSLILAF-IAFWLPSLKPDNEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPLPWGNQLFSPFSTLLWTTTILVLLTLGLIYEWFQGGLEWA 115
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_ELEMA (NADH-ubiquinone oxidoreductase chain 3 OS=Elephas maximus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11 Identity = 35/109 (32.11%), Postives = 64/109 (58.72%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 L+ ++++ L LI+ L EK S YE G +PMG A L F +++++ A+ F++FD+E L PWA+ + + + + +F+ +++L +GL Y W + LEW+ Sbjct: 7 LLTNTMLTSLMVLIAFWLPQTYTYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQANNTNLTLLM-SFMLIILLAIGLAYEWLQKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_DROSU (NADH-ubiquinone oxidoreductase chain 3 OS=Drosophila subobscura GN=mt:ND3 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11 Identity = 32/107 (29.91%), Postives = 60/107 (56.07%), Query Frame = 3 Query: 258 IISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIE-AFIFMLILIVGLVYAWRKGALEWS 575 +I +++ I+ FL S + EK S +E G +P + L F +R+++ ++F++FDVE + P + + ++ + IF+LIL++GL + W +G L WS Sbjct: 10 LILTIVTIVMFLASILSKKALIDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIMKFSNIMIWTTTSIIFILILLIGLYHEWNQGMLNWS 116
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_AVAUN (NADH-ubiquinone oxidoreductase chain 3 OS=Avahi unicolor GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11 Identity = 37/103 (35.92%), Postives = 58/103 (56.31%), Query Frame = 3 Query: 270 VIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 572 ++ +L +I+ L +N EK SSYE G +PMG A L F +++++ A+ F++FD+E L PWA L + + A + + IL GL Y W + LEW Sbjct: 12 ILALLLVMIAFWLPQLNIYTEKYSSYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLKL-MLTMALLLISILAAGLAYEWSQKGLEW 113 The following BLAST results are available for this feature:
BLAST of CK936791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936791 ID=CK936791; Name=CK936791; organism=Citrus sinensis; type=EST; length=627bpback to top |