CK936791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_HALGR (NADH-ubiquinone oxidoreductase chain 3 OS=Halichoerus grypus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.046e-11 Identity = 37/109 (33.94%), Postives = 59/109 (54.13%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 L ++ + L LI+ L +N EK+S YE G +PMG A L F +++++ A+ F++FD+E L PWA D L + A + + +L L Y W + LEW+ Sbjct: 7 LFTNTALASLLVLIAFWLPQLNTYSEKVSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTDNL-TTMLTMALLLISLLAASLAYEWTEKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_BOVIN (NADH-ubiquinone oxidoreductase chain 3 OS=Bos taurus GN=MT-ND3 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.046e-11 Identity = 34/108 (31.48%), Postives = 59/108 (54.63%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILI-VGLVYAWRKGALEWS 575 L+ + + L +I+ L +N EK S YE G +PMG A L F +++++ A+ F++FD+E L P + + + +F++IL+ V L Y W + LEW+ Sbjct: 7 LLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTANLNTMLTMALFLIILLAVSLAYEWTQKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_BOSMU (NADH-ubiquinone oxidoreductase chain 3 OS=Bos mutus grunniens GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.046e-11 Identity = 34/108 (31.48%), Postives = 59/108 (54.63%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILI-VGLVYAWRKGALEWS 575 L+ + + L +I+ L +N EK S YE G +PMG A L F +++++ A+ F++FD+E L P + + + +F++IL+ V L Y W + LEW+ Sbjct: 7 LLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIILLAVSLAYEWTQKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_BOSIN (NADH-ubiquinone oxidoreductase chain 3 OS=Bos indicus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.046e-11 Identity = 34/108 (31.48%), Postives = 59/108 (54.63%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILI-VGLVYAWRKGALEWS 575 L+ + + L +I+ L +N EK S YE G +PMG A L F +++++ A+ F++FD+E L P + + + +F++IL+ V L Y W + LEW+ Sbjct: 7 LLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIILLAVSLAYEWTQKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_BALPH (NADH-ubiquinone oxidoreductase chain 3 OS=Balaenoptera physalus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.046e-11 Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 L+ ++ + +L I+ L +N EK S YE G +PMG A L F +++++ A+ F++FD+E L PWA+ + L + + F+ L L L Y W + LEW+ Sbjct: 7 LLTNTTLALLLVFIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQSNNLNTMLTMALFLISL-LAASLAYEWTQEGLEWA 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_BALMU (NADH-ubiquinone oxidoreductase chain 3 OS=Balaenoptera musculus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.046e-11 Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 L+ ++ + +L I+ L +N EK S YE G +PMG A L F +++++ A+ F++FD+E L PWA+ + L + + F+ L L L Y W + LEW+ Sbjct: 7 LLTNTTLALLLVFIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQSNNLNTMLTMALFLISL-LAASLAYEWTQEGLEWA 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_PODFL (NADH-ubiquinone oxidoreductase chain 3 OS=Podomys floridanus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.978e-11 Identity = 37/109 (33.94%), Postives = 63/109 (57.80%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 +I+S+ + ++AF L +N EK + YE G +PM A L F +++++ A+ F++FD+E L PWA+ + + + AFI + IL +GL Y W + LEW+ Sbjct: 11 IILSTCLIMIAFW----LPQLNVYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQMHNINM-MMSTAFILVSILALGLAYEWLQKGLEWT 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_PISOC (NADH-ubiquinone oxidoreductase chain 3 OS=Pisaster ochraceus GN=ND3 PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.978e-11 Identity = 34/110 (30.91%), Postives = 64/110 (58.18%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAV-LAPINK-GPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVP-VFIEAFIFMLILIVGLVYAWRKGALEWS 575 +I+ S++ + A L+ A P K E S YE G +P+ A + F R+++ A++F++FD+E L+P+ + + V A +F+ IL++GL++ W +G L+W+ Sbjct: 6 IIVLSILAVTAALVFAAHFLPSRKLDLENGSPYECGFDPLNSARVPFSFRFFLVAILFLLFDLEIALLFPFPQALFIFNSSHVLYIATLFLAILLIGLIFEWTQGGLDWA 115
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_PIG (NADH-ubiquinone oxidoreductase chain 3 OS=Sus scrofa GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.978e-11 Identity = 35/108 (32.41%), Postives = 58/108 (53.70%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILI-VGLVYAWRKGALEWS 575 L+ + + L LI+ L +N EK S YE G +PMG A L F +++++ A+ F++FD+E L P + + + +F+LIL+ L Y W + LEW+ Sbjct: 7 LLTNVTLASLLVLIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLKTMLTMALFLLILLAASLAYEWTQKGLEWA 114
BLAST of CK936791 vs. ExPASy Swiss-Prot
Match: NU3M_LOXAF (NADH-ubiquinone oxidoreductase chain 3 OS=Loxodonta africana GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.978e-11 Identity = 34/109 (31.19%), Postives = 64/109 (58.72%), Query Frame = 3 Query: 255 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 575 L+ ++++ L LI+ L EK S YE G +P+G A L F +++++ A+ F++FD+E L PWA+ + + + + +F+ +++L +GL Y W + LEW+ Sbjct: 7 LLTNTMLTSLMVLIAFWLPQTYNYSEKTSPYECGFDPVGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQANNTSLTLLM-SFMLIILLAIGLAYEWLQKGLEWT 114 The following BLAST results are available for this feature:
BLAST of CK936791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936791 ID=CK936791; Name=CK936791; organism=Citrus sinensis; type=EST; length=627bpback to top |