CK936784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936784 vs. ExPASy Swiss-Prot
Match: RL23_ARCFU (50S ribosomal protein L23P OS=Archaeoglobus fulgidus GN=rpl23p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.693e-12 Identity = 29/64 (45.31%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 18 DNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 209 + N L IVD+RA K IK ++K++ ++ ++VNTLI P G KKAY++L PDY A ++ +K+G+ Sbjct: 19 EKNVLTAIVDMRARKEHIKKEIEKLFNVEVERVNTLITPKGEKKAYIKLKPDYSAEEILSKLGV 82
BLAST of CK936784 vs. ExPASy Swiss-Prot
Match: RL23_SULSO (50S ribosomal protein L23P OS=Sulfolobus solfataricus GN=rpl23p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.711e-12 Identity = 33/69 (47.83%), Postives = 47/69 (68.12%), Query Frame = 3 Query: 3 VKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 209 +K IE NTL IVD K IK +V++++ ++ KVN +I P G KKAYV+L P+Y A D+A+K+GI Sbjct: 12 LKLIESYNTLTLIVDKSDTKDDIKKSVERLFNVKVVKVNVVITPQGYKKAYVKLAPEYKASDIAHKLGI 80
BLAST of CK936784 vs. ExPASy Swiss-Prot
Match: RL23_THESM (50S ribosomal protein L23P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl23p PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.268e-11 Identity = 34/69 (49.28%), Postives = 46/69 (66.67%), Query Frame = 3 Query: 3 VKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 209 + +E N L FIVD RA K IK AV+ +YE++ KVN +I G KKAYV+L P+Y A +VA +IG+ Sbjct: 17 ISMVERENKLTFIVDKRATKPDIKKAVETVYEVKVDKVNIVITMKGEKKAYVKLKPEYSASEVAARIGL 85
BLAST of CK936784 vs. ExPASy Swiss-Prot
Match: RL23_METKA (50S ribosomal protein L23P OS=Methanopyrus kandleri GN=rpl23p PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.656e-11 Identity = 34/70 (48.57%), Postives = 50/70 (71.43%), Query Frame = 3 Query: 3 VKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 212 ++ +E N L FIV A+K IK AV+++++++ +KVNTLI P G KKAYV+L P+Y A DVA +GI+ Sbjct: 26 MRLMEAENKLTFIVRRDANKPLIKKAVEELFDVEVEKVNTLITPTGEKKAYVKLKPEYRAEDVAVDLGIL 95
BLAST of CK936784 vs. ExPASy Swiss-Prot
Match: RL23_PYRAE (50S ribosomal protein L23P OS=Pyrobaculum aerophilum GN=rpl23p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.163e-11 Identity = 29/66 (43.94%), Postives = 49/66 (74.24%), Query Frame = 3 Query: 15 EDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 212 E N + IVD A K++I + V+++Y ++ +KVNTLI P G KKAYV+LT +++A+D+ +K+G++ Sbjct: 16 EKENKITLIVDRGATKKQIAEEVERLYNVKVEKVNTLITPRGEKKAYVKLTKEHNAMDLLSKLGVL 81
BLAST of CK936784 vs. ExPASy Swiss-Prot
Match: RL23_STAMF (50S ribosomal protein L23P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl23p PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.826e-11 Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 3 Query: 12 IEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 212 I+ NTL FIVD A K+ IKDAV+ ++ ++ KV TLI G KKAYV+L P++ A ++A+++G+I Sbjct: 25 IDKENTLTFIVDRNASKKDIKDAVELVFGVKVLKVRTLITSRGEKKAYVKLAPEHRASEIASQLGLI 91
BLAST of CK936784 vs. ExPASy Swiss-Prot
Match: RL23_SULTO (50S ribosomal protein L23P OS=Sulfolobus tokodaii GN=rpl23p PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.820e-11 Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 3 Query: 3 VKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 212 +K IE NTL IV+ A K IK ++KM+ ++ KVNTLI G KKAYV+L +++A D+A+++GI+ Sbjct: 13 IKLIESQNTLTVIVNKEATKADIKREIEKMFNVKVDKVNTLITIRGEKKAYVKLKKEFNASDIAHRLGIL 82
BLAST of CK936784 vs. ExPASy Swiss-Prot
Match: RL23_METVS (50S ribosomal protein L23P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl23p PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 8.221e-11 Identity = 31/69 (44.93%), Postives = 48/69 (69.57%), Query Frame = 3 Query: 3 VKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 209 +K IE+ N LVF V+ +A K IK+A+K+++ + +VNT I P G KKAY++L +Y+A +VA +GI Sbjct: 17 MKLIEEENRLVFYVERKATKEDIKEAIKQLFNAEVAEVNTNITPKGQKKAYIKLKDEYNAGEVAASLGI 85 The following BLAST results are available for this feature:
BLAST of CK936784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK936784 ID=CK936784; Name=CK936784; organism=Citrus sinensis; type=EST; length=438bpback to top |