CK936783
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK936783 vs. ExPASy Swiss-Prot
Match: YIPF5_MOUSE (Protein YIPF5 OS=Mus musculus GN=Yipf5 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.768e-26 Identity = 60/176 (34.09%), Postives = 112/176 (63.64%), Query Frame = 3 Query: 333 FDDEEPLLDELGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVAILAAFSLFLPXGGAIRFAVSAXXVLWAARASTNLMVS-LADGGEEHRGLIAYACFLIYTLFSLLCIF 854 F++E PLL+ELGI+ D IW+KT ++L+P R + ++ +DL+GP+V L+FG LLAGK+QFG + G + + ++ + N+++ + SV+GYC+LP+ +L++F++ G + ++A + W + +++ + +S LA G++ L+AY C L+Y +F+L+ +F Sbjct: 86 FEEEPPLLEELGINFDHIWQKTLTVLHPLRAADGSIMNETDLAGPVVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMS--MTGVSFGCVASVLGYCLLPMILLSSFAVVFSLQGMVGILLTATIIGWCSFSASKIFISALAMDGQQL--LVAYPCALLYGVFALISVF 257
BLAST of CK936783 vs. ExPASy Swiss-Prot
Match: YIPF7_BOVIN (Protein YIPF7 OS=Bos taurus GN=YIPF7 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.088e-24 Identity = 59/175 (33.71%), Postives = 106/175 (60.57%), Query Frame = 3 Query: 333 FDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVAILAAFSLFLPXGGAIRFAVSAXXVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLCIF 854 F++E PLL+ELGI+ D IW+KT ++LNP + + ++ +DL+GPI+ ++ G LLAGK+QFG + G + + ++ + N+++ + + SV+GYC+LP+ IL++ ++F G + + W + +++ + S A E + LIAY C L+Y LF+L+ +F Sbjct: 84 FEEEPPLLEELGINFDHIWQKTLTVLNPMKPADGSIMNETDLTGPILFCMALGATLLLAGKVQFGYVYGMSAIGCLGIHALLNLMS--SSGVSYGCVASVLGYCLLPMVILSSCAIFFSLQGTFGTVSALVIIGWCSLSASKIFTS-ALAMEGQQLLIAYPCALLYGLFALVTVF 255
BLAST of CK936783 vs. ExPASy Swiss-Prot
Match: YIPF5_DICDI (Protein YIPF5 homolog OS=Dictyostelium discoideum GN=yipf5 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.421e-24 Identity = 60/175 (34.29%), Postives = 107/175 (61.14%), Query Frame = 3 Query: 333 FDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVAILAAFSLFLPXGGAIRFAVSAXXVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLCIF 854 FD+E PLL+ELGI+ D I KT S+LNP + ++ + +DL GPI+ L G L++GK+QFG I G ++ + +Y+V N+++ + +D++ SV+GYC+LP+ L+ SL + G + + + ++W+ +++ + V + ++ R L+AY L+YT F+L+ F Sbjct: 41 FDNELPLLEELGINFDHIRSKTLSVLNPLKKIDSHIMDDTDLGGPILFGLLLGFSLLMSGKIQFGYIYGLGLIGCVSMYIVLNLMSEK--GIDIYRVISVLGYCLLPMIFLSFTSLIININGMVGYILIGFAIVWSTYSASKMFVKVLSMIDQ-RILVAYPVGLLYTGFALITAF 212
BLAST of CK936783 vs. ExPASy Swiss-Prot
Match: YIP1_YEAST (Protein transport protein YIP1 OS=Saccharomyces cerevisiae GN=YIP1 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.969e-23 Identity = 63/182 (34.62%), Postives = 99/182 (54.40%), Query Frame = 3 Query: 333 FDDEEPLLDELGIHPDQIWKKTKSILNPFR----VNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRN----GNLDLHTCTSVVGYCMLPVAILAAFSLFLPXGGAIRFAVSAXXVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLCIF 854 + E PLL+E+GI+ D I KTK +L P R V + SDL+GP++ +L FGLF L+AGK+ FG I G + +I L+ + +++ + NL S++GYC LP+ L+ +F + VS V+W+ S+ + SL + R LIAY + Y++F+L+ IF Sbjct: 67 YPHEPPLLEEIGINFDHIITKTKMVLIPIRFGSGVPQEILNDSDLAGPLIFFLLFGLFLLMAGKVHFGYIYGVALFGTISLHNLSKLMSNNDTSTQTNLQFFNTASILGYCFLPLCFLSLLGIFHGLNNTTGYVVSVLFVIWSTWTSSGFLNSLLQ-LQNARLLIAYPLLIFYSVFALMVIF 247
BLAST of CK936783 vs. ExPASy Swiss-Prot
Match: YIP1_SCHPO (Protein transport protein yip1 OS=Schizosaccharomyces pombe GN=yip1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.682e-17 Identity = 54/175 (30.86%), Postives = 94/175 (53.71%), Query Frame = 3 Query: 333 FDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVAILAAFSLFLPXGGAIRFAVSAXXVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLCIF 854 + E LL+EL I+ I +KT +LNPF+ V+ + +D++GPI+ L F F L G+ FG I G ++ S+ L+ V +++ + NL SV+GY +LP+ ++A F G +A++A +W A++ + V + R L+AY L Y +F+++ +F Sbjct: 54 YPGEPSLLEELEINFGHIKQKTTHVLNPFKHVDVHIMDDTDMAGPILFCLLFSTFLSLHGRSHFGYIYGIALLGSLSLHFVLRLMSAK--NLFFTRTVSVLGYSLLPLVVIAFFKNIFTFNGIAGYALAALACIWCTYAASAMFVGILQ-VNNMRFLVAYPIALFYGVFAVITVF 225 The following BLAST results are available for this feature:
BLAST of CK936783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936783 ID=CK936783; Name=CK936783; organism=Citrus sinensis; type=EST; length=856bpback to top |