CK936780

Overview
NameCK936780
Unique NameCK936780
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1248 contig Csv1_Contig1248:37..882. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: METB_HELPJ (Cystathionine gamma-synthase OS=Helicobacter pylori J99 GN=metB PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.057e-40
Identity = 81/193 (41.97%), Postives = 120/193 (62.18%), Query Frame = 1
Query:  268 NEFDPYGALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA 846
            NE    GA+S P+YQT+T++Q +   +  Y+Y+RSGNPTR ALE              F SG+A + AV  LL +G+ ++ GDD+YGG  RL ++V  K G+    ++T DL ++  AI P TK +++E+P+NP  +I D+ + A +A  H  L +VDN+  +P    PL LG DIV H+ TK++ GHSDV+A
Sbjct:   13 NEDATTGAVSVPIYQTSTYRQDAIGRHKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHAVFSLLQSGDHVLLGDDVYGGNFRLFNKVLVKNGLSCTIIDTSDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKEHNLLTIVDNTFATPYCQNPLLLGTDIVAHNGTKYLGGHSDVVA 205          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: METB_MYCTU (Cystathionine gamma-synthase OS=Mycobacterium tuberculosis GN=metB PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.667e-39
Identity = 86/188 (45.74%), Postives = 115/188 (61.17%), Query Frame = 1
Query:  286 GALSTPLYQTATFKQPSATE-NGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 843
            GA++ P+Y ++TF Q       G ++Y R+GNPTR ALE+             F+SGMAA   A+  +L  G+ +V  DD YGGT RL+ +V  +  V    V   DLD V +AI P T+L+WVE+PTNP   I DI  IAE+     A +LVDN+  SP L +PL LGAD+V+HS TK+I GHSDV+
Sbjct:   30 GAVNVPIYASSTFAQDGVGGLRGGFEYARTGNPTRAALEASLAAVEEGAFARAFSSGMAATDCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTRWDVQYTPVRLADLDAVGAAITPRTRLIWVETPTNPLLSIADITAIAELGTDRSAKVLVDNTFASPALQQPLRLGADVVLHSTTKYIGGHSDVV 217          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: METB_MYCBO (Cystathionine gamma-synthase OS=Mycobacterium bovis GN=metB PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.667e-39
Identity = 86/188 (45.74%), Postives = 115/188 (61.17%), Query Frame = 1
Query:  286 GALSTPLYQTATFKQPSATE-NGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 843
            GA++ P+Y ++TF Q       G ++Y R+GNPTR ALE+             F+SGMAA   A+  +L  G+ +V  DD YGGT RL+ +V  +  V    V   DLD V +AI P T+L+WVE+PTNP   I DI  IAE+     A +LVDN+  SP L +PL LGAD+V+HS TK+I GHSDV+
Sbjct:   30 GAVNVPIYASSTFAQDGVGGLRGGFEYARTGNPTRAALEASLAAVEEGAFARAFSSGMAATDCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTRWDVQYTPVRLADLDAVGAAITPRTRLIWVETPTNPLLSIADITAIAELGTDRSAKVLVDNTFASPALQQPLRLGADVVLHSTTKYIGGHSDVV 217          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: METB_BACSU (Cystathionine gamma-synthase OS=Bacillus subtilis GN=metB PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.231e-38
Identity = 85/203 (41.87%), Postives = 116/203 (57.14%), Query Frame = 1
Query:  241 VSTLLMNFSNEFDPY-GALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA 846
            V T L    N  D   G +S P+Y +  ++     E+  +DY R+ NPTR  +E              F+SGMAA+  +  L  +G+E++   DLYGGT RL      K G+     +  D D + S I P TK V+VE+PTNP  Q  DI  IA +   HG LL+VDN+  +PVL RPLELGADIV+HSATK++ GH+D++A
Sbjct:    5 VETKLAQIGNRSDEVTGTVSAPIYLSTAYRHRGIGESTGFDYVRTKNPTRQLVEDAIANLENGARGLAFSSGMAAIQTIMALFKSGDELIVSSDLYGGTYRLFENEWKKYGLTFHYDDFSDEDCLRSKITPNTKAVFVETPTNPLMQEADIEHIARITKEHGLLLIVDNTFYTPVLQRPLELGADIVIHSATKYLGGHNDLLA 207          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: METB_MYCLE (Cystathionine gamma-synthase OS=Mycobacterium leprae GN=metB PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.477e-38
Identity = 87/205 (42.44%), Postives = 122/205 (59.51%), Query Frame = 1
Query:  238 GVSTLLMNFSNEFDPY-GALSTPLYQTATFKQPSATE-NGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 843
            G++T  ++     DP  GA++ P+Y ++TF Q    E  G ++Y R+GNP R ALE+             F+SGMAA   A+  +L  G+ ++  DD+YGGT RL+ +V  +  V    V   DLD V +AI   T+L+WVE+PTNP   I DI  I E+   H   +LVDN+  SP L +PL LGAD+V+HS TK+I GHSDV+
Sbjct:   13 GLATKAIHAGYRPDPATGAVNVPIYASSTFAQDGVGELRGGFEYARTGNPMRAALEASLATVEEGVFARAFSSGMAASDCALRVMLRPGDHVIIPDDVYGGTFRLIDKVFTQWNVDYTPVPLSDLDAVRAAITSRTRLIWVETPTNPLLSIADITSIGELGKKHSVKVLVDNTFASPALQQPLMLGADVVLHSTTKYIGGHSDVV 217          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: METC_COXBU (Cystathionine beta-lyase OS=Coxiella burnetii GN=metC PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.446e-37
Identity = 83/203 (40.89%), Postives = 123/203 (60.59%), Query Frame = 1
Query:  241 VSTLLMNFSNEFDPY-GALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT-GVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 843
            + T +++   + DP  GA+ TP+Y  +T+ Q S   +  Y+Y+RS NPTR A E              F SGMAA A +  LL  G+ +V  DD+YGG+ RL   V  ++ G+    V+  D ++V  A+   TK++WVESP+NPR +I D+ KIAE+A     + + DN+  +P++ RPLELG DIV HSATK++ GHSD++
Sbjct:   11 IDTRVIHAGQKPDPLTGAVMTPIYTASTYAQKSPGVHQGYEYSRSQNPTRFAYERCVADLESGQHGFAFASGMAATATILELLQPGDHVVVMDDVYGGSYRLFENVRKRSAGLSFSFVDFTDENKVREAVTAKTKMLWVESPSNPRLKIVDLAKIAEIAKEKNIIAVADNTFATPIIQRPLELGFDIVTHSATKYLNGHSDII 213          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: METB_HERAU (Probable cystathionine gamma-synthase (Fragment) OS=Herpetosiphon aurantiacus GN=metB PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.446e-37
Identity = 75/186 (40.32%), Postives = 113/186 (60.75%), Query Frame = 1
Query:  286 GALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 843
            GA+  P+YQT+T+ Q    ++  Y+Y+R+ NPTR AL++             F SG+ A   +  +L  G+ ++ GDD+YGGT RL  RV  + G+    ++  D + V +AI P T+L+W+E+PTNP  ++  I  I  +A  HG   +VDN+  SP   RP+ LGAD+V+HS TK+I GHSDV+
Sbjct:   21 GAVIVPIYQTSTYAQRGVGDHTGYEYSRTDNPTRTALQTCLAALEEAKHALVFASGLGASTTLMLMLKAGDHVICGDDVYGGTYRLFQRVMTEHGLSFDFIDMADPEAVRAAIKPNTRLIWLETPTNPLLKLAPIAAITRVAREHGIWTIVDNTFASPYNQRPITLGADMVLHSTTKYIGGHSDVV 206          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: CGL_PIG (Cystathionine gamma-lyase OS=Sus scrofa GN=CTH PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.889e-37
Identity = 79/186 (42.47%), Postives = 116/186 (62.37%), Query Frame = 1
Query:  289 ALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 843
            A+  P+  + TFKQ +  ++  ++Y+RSGNPT + LE              F SG+AA   +THLL  G +I++ DD+YGGT+R   +V  + G+ +  V+      + +AI P TKLVW+E+PTNP  ++ DI   A++ H HG  +L+VDN+ MS    RPL LGADI M+SATK++ GHSDV+
Sbjct:   36 AVVPPISLSTTFKQEAPGQHSGFEYSRSGNPTXNCLEKAVAVLDGAKYSLAFASGLAATVTITHLLKAGXQIISMDDVYGGTNRYFRQVAAEFGLKISFVDCSKSKLLEAAITPETKLVWIETPTNPILKMIDIEACAQIVHKHGDIILVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVV 221          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: CGL_BOVIN (Cystathionine gamma-lyase OS=Bos taurus GN=CTH PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.467e-37
Identity = 79/186 (42.47%), Postives = 115/186 (61.83%), Query Frame = 1
Query:  289 ALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 843
            A+  P+  + TFKQ +  ++  ++Y+RSGNPTR+ LE              F SG+AA   +THLL  G++I+  DD+YGGT+R   +V  + G+ +  V+      + +AI P TKLVW+E+PTNP  ++ DI   A   H HG  +L+VDN+ MS    RPL LGADI M+SATK++ G+SDV+
Sbjct:   36 AVVPPISLSTTFKQGAPGQHSGFEYSRSGNPTRNCLEKAVAALDGAKYSLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVATEFGLKISFVDCSKPKLLEAAITPETKLVWIETPTNPSLKMIDIEACAHTVHKHGDIILVVDNTFMSAYFQRPLSLGADICMYSATKYMNGYSDVV 221          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: CGL_MACFA (Cystathionine gamma-lyase OS=Macaca fascicularis GN=CTH PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.221e-37
Identity = 78/178 (43.82%), Postives = 112/178 (62.92%), Query Frame = 1
Query:  313 TATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 843
            + TFKQ +  ++  ++Y+RSGNPTR+ LE              F SG+AA   +THLL  G++I+  DD+YGGT+R   +V  + G+ +  V+   +  + +AI P TKLVW+E+PTNP  ++ DI   A + H  G  +L+VDN+ MSP   RPL LGADI M SATK++ GHSDV+
Sbjct:   44 STTFKQAAPGQHSGFEYSRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPVLKMIDIEACAHIVHKRGDIILVVDNTFMSPYFQRPLALGADICMCSATKYMNGHSDVV 221          
The following BLAST results are available for this feature:
BLAST of CK936780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
METB_HELPJ9.057e-4041.97Cystathionine gamma-synthase OS=Helicobacter pylor... [more]
METB_MYCTU7.667e-3945.74Cystathionine gamma-synthase OS=Mycobacterium tube... [more]
METB_MYCBO7.667e-3945.74Cystathionine gamma-synthase OS=Mycobacterium bovi... [more]
METB_BACSU2.231e-3841.87Cystathionine gamma-synthase OS=Bacillus subtilis ... [more]
METB_MYCLE8.477e-3842.44Cystathionine gamma-synthase OS=Mycobacterium lepr... [more]
METC_COXBU1.446e-3740.89Cystathionine beta-lyase OS=Coxiella burnetii GN=m... [more]
METB_HERAU1.446e-3740.32Probable cystathionine gamma-synthase (Fragment) O... [more]
CGL_PIG1.889e-3742.47Cystathionine gamma-lyase OS=Sus scrofa GN=CTH PE=... [more]
CGL_BOVIN2.467e-3742.47Cystathionine gamma-lyase OS=Bos taurus GN=CTH PE=... [more]
CGL_MACFA3.221e-3743.82Cystathionine gamma-lyase OS=Macaca fascicularis G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004518_A01 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936780 ID=CK936780; Name=CK936780; organism=Citrus sinensis; type=EST; length=846bp
GGGGATCTCAAGCCTTTCGTCTCCGATGCCTACACTGATCTCACCAACAG
TGGTTCTTCAATACCTTTAAATTCCCCAACAAGCTTTGGGTTTAGTAAAA
GGCGGATAATATTTGCGAAGGAATTAAAACTGAATTGCTCGATAGACAGG
GAAAAGGAAATTGATGTCAGCACTTCAGCTCTTGTGGATGATGTAGCTGA
GTGTTTGGAAGAAGAAATGAGCGTGGAGGAGGAGCCTGGTGTTTCTACAT
TATTGATGAATTTTTCTAATGAGTTTGATCCTTATGGTGCGTTGAGCACT
CCGCTTTATCAGACTGCGACATTTAAGCAACCTTCTGCGACAGAGAATGG
CGCCTATGATTATACCAGAAGTGGAAATCCTACACGAGATGCCTTAGAAA
GCCTCCTTGCAAAGCTTGATAAGGCCGACCAAGCGCTTTGCTTCACCAGC
GGAATGGCTGCTTTGGCTGCTGTTACTCATCTTCTTGGAACTGGTGAAGA
AATTGTTGCTGGAGATGACCTGTATGGTGGTACTGATCGTTTGTTATCAC
GAGTAACTCCTAAAACTGGGGTTGTAGTGAAGCGTGTGAATACATGCGAT
CTAGATGAGGTTGCCTCTGCTATTGGTCCTTGGACAAAGCTTGTCTGGGT
GGAAAGTCCAACCAACCCTCGACAACAAATTTGTGACATTCGTAAAATTG
CCGAAATGGCTCATGCACATGGTGCTCTTCTGCTAGTGGATAACAGCATT
ATGTCCCCTGTATTATCTCGACCTCTGGAACTCGGAGCAGACATTGTGAT
GCACTCAGCTACTAAATTTATAGCTGGACATAGTGATGTCATGGCA
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