CK936780

Overview
NameCK936780
Unique NameCK936780
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1248 contig Csv1_Contig1248:37..882. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: METB_ARATH (Cystathionine gamma-synthase, chloroplastic OS=Arabidopsis thaliana GN=CGS1 PE=2 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.478e-21
Identity = 61/196 (31.12%), Postives = 99/196 (50.51%), Query Frame = 1
Query:  289 ALSTPLYQTATFKQPSATE--------NGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGM-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA 846
            A++TP+  T+ +      E        + +++Y R GNPT   LE                SGM A+   +  L+  G  IV   D Y  T   +    PK G+ V  ++  D+  + +A+  +   L + ESPTNP  +  DI  ++++ H  G L+ +D +  +P+  + L LGAD+V+HSATK+I GH+DV+A
Sbjct:  194 AITTPVVNTSAYFFKKTAELIDFKEKRSVSFEYGRYGNPTTVVLEDKISALEGAESTLVMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFMENFLPKLGITVTVIDPADIAGLEAAVNEFKVSLFFTESPTNPFLRCVDIELVSKICHKRGTLVCIDGTFATPLNQKALALGADLVVHSATKYIGGHNDVLA 389          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: CYSD_EMENI (O-acetylhomoserine (thiol)-lyase OS=Emericella nidulans GN=cysD PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.478e-21
Identity = 70/206 (33.98%), Postives = 102/206 (49.51%), Query Frame = 1
Query:  247 TLLMNFSNEFDPY-GALSTPLYQTATFKQPSATENGAYD--------YTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAA-LAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI-MSPVLSRPLELGADIVMHSATKFIAGH 831
            TL ++   E DP   + + P+Y T ++    +               Y+R  NPT D  E               +SG AA   A++ L   G+ IV+  +LYGGT      + P+ G+  K V     +++A+AI   TK V+VE+  NPR  + D   IA++AH  G  L+VDN+        RP+E GADIV+HSATK+I GH
Sbjct:   11 TLQLHAGQEPDPATNSRAVPIYATTSYTFNDSAHGARLFGLKEFGNIYSRIMNPTVDVFEKRIAALEGGVAAVAASSGQAAQFMAISALAHAGDNIVSTSNLYGGTYNQFKVLFPRLGITTKFVQGDKAEDIAAAIDDRTKAVYVETIGNPRYNVPDFEVIAKVAHEKGIPLVVDNTFGAGGYFVRPIEHGADIVVHSATKWIGGH 216          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: CYSA_STRCO (Putative cystathionine gamma-lyase OS=Streptomyces coelicolor GN=cysA PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.098e-20
Identity = 65/173 (37.57%), Postives = 92/173 (53.18%), Query Frame = 1
Query:  349 GAYDYTRSGNPTRDALESXXXXXXXXXXXXC----FTSGMAALAAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 843
            G Y Y R  NPT   LES                 F SGMAA+++V    L  G+  V  DD Y     + +++    G+ V+   T     LD +  A     KL+W+E+P+NP   +CD+R++ E AHA GAL+ VDN++ +P+  RPLELGAD  + S TK + GH DV+
Sbjct:   59 GPYTYGRDENPTWTRLESAIGELEAPGEAGVETLVFASGMAAISSVLFSQLRAGDTAVLPDDGYQALPLVRAQLEAY-GIEVRTAPTGRDAQLDVLDGA-----KLLWIETPSNPGLDVCDVRRLVEAAHAGGALVAVDNTLATPLGQRPLELGADFSVASGTKQLTGHGDVL 225          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: METC_RHIL3 (Putative cystathionine beta-lyase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=metC PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 7.971e-20
Identity = 63/208 (30.29%), Postives = 105/208 (50.48%), Query Frame = 1
Query:  238 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSA----TENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 843
            G++T L +  N+ FD +G ++ P+   +T   P+A    T    Y Y   G PT DAL                 SG+AA+       +  G+  +  D +YG T      +  + GV V+  +      + +     TKLV  E+P +   ++ DI  I+ +AH HGA++++DN+  +PV  RPL+ G DI +H++TK+ +GHSD++
Sbjct:   12 GINTRLTHIGNDPFDYHGFINPPVVHASTVLFPNARAMETRTQKYTYGTRGTPTTDALCEAIDALEGSAGTILVPSGLAAVTIPFLGFVAAGDHALVVDSVYGPTRHFCDTMLKRLGVEVEYYHPEIGAGIETLFRSNTKLVHTEAPGSNTFEMQDIPAISAVAHRHGAVVMMDNTWATPVYFRPLDHGVDISIHASTKYPSGHSDIL 219          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: MET17_KLULA (Protein MET17 OS=Kluyveromyces lactis GN=MET17 PE=3 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 3.029e-19
Identity = 64/195 (32.82%), Postives = 92/195 (47.18%), Query Frame = 1
Query:  277 DPYGALSTPLYQTATF--------KQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI-MSPVLSRPLELGADIVMHSATKFIAGH 831
            D +   + P+Y T ++         Q    E   Y Y+R  NPT D LE               +SG AA   AVT L  TG+ IV+   LYGGT         + G+  + V+    ++        TK +++ES  NP+  + D  KI  +AH HG  ++VDN+        +P++ GADIV HSATK+I GH
Sbjct:   19 DAHNPRAVPIYATTSYVFNDSKHGAQLFGLETPGYIYSRIMNPTLDVLEKRLAALEGGIAALATSSGQAAQTLAVTGLAHTGDNIVSTSFLYGGTYNQFKVAFKRLGIEARFVDGDKPEDFEKLFDEKTKALYLESIGNPKYNVPDFEKIVAVAHKHGIPVVVDNTFGAGGFFCQPIKYGADIVTHSATKWIGGH 213          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: MET17_YEAST (Protein MET17 OS=Saccharomyces cerevisiae GN=MET17 PE=1 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 9.744e-18
Identity = 61/189 (32.28%), Postives = 89/189 (47.09%), Query Frame = 1
Query:  295 STPLYQTATF--------KQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI-MSPVLSRPLELGADIVMHSATKFIAGH 831
            + P+Y T ++         Q    E   Y Y+R  NPT + LE               +SG AA   A+  L  TG+ IV+   LYGGT         + G+  + V   + +E        TK V++E+  NP+  + D  KI  +AH HG  ++VDN+        +P++ GADIV HSATK+I GH
Sbjct:   26 AVPIYATTSYVFENSKHGSQLFGLEVPGYVYSRFQNPTSNVLEERIAALEGGAAALAVSSGQAAQTLAIQGLAHTGDNIVSTSYLYGGTYNQFKISFKRFGIEARFVEGDNPEEFEKVFDERTKAVYLETIGNPKYNVPDFEKIVAIAHKHGIPVVVDNTFGAGGYFCQPIKYGADIVTHSATKWIGGH 214          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: YFHE_SCHPO (Uncharacterized trans-sulfuration enzyme C23A1.14c OS=Schizosaccharomyces pombe GN=SPAC23A1.14c PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 68/217 (31.34%), Postives = 102/217 (47.00%), Query Frame = 1
Query:  244 STLLMNFSNEFDPYGA---LSTPLYQTATFKQPS-----------ATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIV--AGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA 846
            STL  N  +  D Y     ++ P++ + T+  P            A E+  Y    SGN    A  S             ++SG+AA+  +   L      V   G   Y GT ++++R+   TG+      T  +D    AIG    ++W+E+P NP     DI    E+A   GA+L+VD++   P +   L LGAD V+HSATK++AGHSDV+A
Sbjct:   14 STLSTNVLHADDAYALENDVAPPIHISTTYTYPGTPDTLQPFTKLAEEDFPYYARISGNNVDRAEASLSSVLGAPSVV--YSSGLAAIYGLLSYLNPKHIAVHKPGFGGYSGTIQIIARINRLTGL-----ETSFIDGKCDAIGEGD-VIWLETPLNPLGIAFDIPFYKELAKKKGAILVVDSTFAPPPIQDALVLGADYVVHSATKYLAGHSDVLA 222          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: METC_BORAV (Cystathionine beta-lyase OS=Bordetella avium GN=metC PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 1.115e-13
Identity = 51/165 (30.91%), Postives = 80/165 (48.48%), Query Frame = 1
Query:  352 AYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 843
            A  Y R G  T  ALE               +SG+A ++ V   LL  GE  +  D  YG    L   V  + G+ V   +     ++AS + P T+L++ E+P +   ++ D+  +A  A  H  +L  DN+  S  + RPL LGA + + + TK++ GHSD+M
Sbjct:   61 ASTYGRMGMDTHAALEQVFAELEGGTHCYLASSGLAGISMVFLSLLSAGEHALVADCAYGPVHELHEAVLSRLGIDVTFFDA--KADLASLVRPTTRLIFAEAPGSLLFEMLDMPALARFAKQHDLILATDNTWGSGYIYRPLTLGAQVSVIAGTKYVGGHSDLM 223          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: YHR2_YEAST (Uncharacterized trans-sulfuration enzyme YHR112C OS=Saccharomyces cerevisiae GN=YHR112C PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13
Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = 1
Query:  361 YTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA 846
            Y+R  +P    LES             ++SG+AA  AA+ H     ++I  G   Y G   + + +T   G+    +   D+++ AS       +V +ESP NP     DI  +A  AHA GALL+VD++  SP L      GADIV++SATK+  GHSD+++
Sbjct:   56 YSRLAHPNSTRLESIFSEILDGYAVI-YSSGLAAFYAAMVHY--NPKKIFIGQS-YHGVRAIANILTRNYGIEQHPLE--DIEKCASE----GDIVHLESPVNPYGTSSDIESLARRAHAKGALLIVDSTFASPPLQYAWNFGADIVLYSATKYFGGHSDLLS 208          
BLAST of CK936780 vs. ExPASy Swiss-Prot
Match: METC_YEAST (Putative cystathionine beta-lyase OS=Saccharomyces cerevisiae GN=IRC7 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12
Identity = 52/207 (25.12%), Postives = 96/207 (46.38%), Query Frame = 1
Query:  238 GVSTLLMNFS-NEFDPYGALSTPLYQTATF---KQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 843
            G++T L     N  +  G ++ PLY+ +T    K     +     Y  +G+PT D LE+               SG+ +++ A+  L   G+ I+  D +Y  T  L   +  K GV     +     ++   + P T ++++ESP +   ++ DI  +  +A  HG   ++DN+  +P+       G DI + + TK++ GHSD++
Sbjct:   11 GITTQLSVIGRNPDEQSGFVNPPLYKGSTIILKKLSDLEQRKGRFYGTAGSPTIDNLENAWTHLTGGAGTVLSASGLGSISLALLALSKAGDHILMTDSVYVPTRMLCDGLLAKFGVETDYYDPSIGKDIEKLVKPNTTVIFLESPGSGTMEVQDIPALVSVAKKHGIKTILDNTWATPLFFDAHAHGIDISVEAGTKYLGGHSDLL 217          
The following BLAST results are available for this feature:
BLAST of CK936780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
METB_ARATH2.478e-2131.12Cystathionine gamma-synthase, chloroplastic OS=Ara... [more]
CYSD_EMENI2.478e-2133.98O-acetylhomoserine (thiol)-lyase OS=Emericella nid... [more]
CYSA_STRCO2.098e-2037.57Putative cystathionine gamma-lyase OS=Streptomyces... [more]
METC_RHIL37.971e-2030.29Putative cystathionine beta-lyase OS=Rhizobium leg... [more]
MET17_KLULA3.029e-1932.82Protein MET17 OS=Kluyveromyces lactis GN=MET17 PE=... [more]
MET17_YEAST9.744e-1832.28Protein MET17 OS=Saccharomyces cerevisiae GN=MET17... [more]
YFHE_SCHPO5.912e-1531.34Uncharacterized trans-sulfuration enzyme C23A1.14c... [more]
METC_BORAV1.115e-1330.91Cystathionine beta-lyase OS=Bordetella avium GN=me... [more]
YHR2_YEAST2.484e-1334.36Uncharacterized trans-sulfuration enzyme YHR112C O... [more]
METC_YEAST4.684e-1225.12Putative cystathionine beta-lyase OS=Saccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004518_A01 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936780 ID=CK936780; Name=CK936780; organism=Citrus sinensis; type=EST; length=846bp
GGGGATCTCAAGCCTTTCGTCTCCGATGCCTACACTGATCTCACCAACAG
TGGTTCTTCAATACCTTTAAATTCCCCAACAAGCTTTGGGTTTAGTAAAA
GGCGGATAATATTTGCGAAGGAATTAAAACTGAATTGCTCGATAGACAGG
GAAAAGGAAATTGATGTCAGCACTTCAGCTCTTGTGGATGATGTAGCTGA
GTGTTTGGAAGAAGAAATGAGCGTGGAGGAGGAGCCTGGTGTTTCTACAT
TATTGATGAATTTTTCTAATGAGTTTGATCCTTATGGTGCGTTGAGCACT
CCGCTTTATCAGACTGCGACATTTAAGCAACCTTCTGCGACAGAGAATGG
CGCCTATGATTATACCAGAAGTGGAAATCCTACACGAGATGCCTTAGAAA
GCCTCCTTGCAAAGCTTGATAAGGCCGACCAAGCGCTTTGCTTCACCAGC
GGAATGGCTGCTTTGGCTGCTGTTACTCATCTTCTTGGAACTGGTGAAGA
AATTGTTGCTGGAGATGACCTGTATGGTGGTACTGATCGTTTGTTATCAC
GAGTAACTCCTAAAACTGGGGTTGTAGTGAAGCGTGTGAATACATGCGAT
CTAGATGAGGTTGCCTCTGCTATTGGTCCTTGGACAAAGCTTGTCTGGGT
GGAAAGTCCAACCAACCCTCGACAACAAATTTGTGACATTCGTAAAATTG
CCGAAATGGCTCATGCACATGGTGCTCTTCTGCTAGTGGATAACAGCATT
ATGTCCCCTGTATTATCTCGACCTCTGGAACTCGGAGCAGACATTGTGAT
GCACTCAGCTACTAAATTTATAGCTGGACATAGTGATGTCATGGCA
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