CX043710
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: YC8E_SCHPO (Uncharacterized protein C622.14 OS=Schizosaccharomyces pombe GN=SPCC622.14 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 8.089e-21 Identity = 49/100 (49.00%), Postives = 62/100 (62.00%), Query Frame = 2 Query: 17 KMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFKQHG-WTDGGKIEAKYTSRAAELYKQILAKEV 313 K CFDC+A NP WAS GIF+C+DCS HR LGV SFVRS +D+WS Q+KMM GGN+ A+ F ++ G I KY + AE +Q + EV Sbjct: 15 KKCFDCDAPNPQWASCNLGIFICLDCSGQHRGLGVEKSFVRSITMDNWSERQVKMMEVGGNSNAKTFLSTDPMFSAAGSIREKYNTDIAEDLRQKIRAEV 114
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: ARFG1_RAT (ADP-ribosylation factor GTPase-activating protein 1 OS=Rattus norvegicus GN=Arfgap1 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.944e-20 Identity = 44/96 (45.83%), Postives = 64/96 (66.67%), Query Frame = 2 Query: 20 MCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFK-QHGWTDGGKIEAKYTSRAAELYKQILA 304 +CF+C A NP W SVTYGI++C++CS HR LGVH+SFVRS +D W +L+ M GGN + + F + Q + ++ KY+SRAA L++ +A Sbjct: 21 VCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKMKAGGNAKFREFLEAQDDYEPSWSLQDKYSSRAAALFRDKVA 116
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: ARFG1_MOUSE (ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus GN=Arfgap1 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 8.944e-20 Identity = 44/96 (45.83%), Postives = 64/96 (66.67%), Query Frame = 2 Query: 20 MCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFK-QHGWTDGGKIEAKYTSRAAELYKQILA 304 +CF+C A NP W SVTYGI++C++CS HR LGVH+SFVRS +D W +L+ M GGN + + F + Q + ++ KY+SRAA L++ +A Sbjct: 21 VCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKMKAGGNAKFREFLETQDDYEPSWSLQDKYSSRAAALFRDKVA 116
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: ARFG1_HUMAN (ADP-ribosylation factor GTPase-activating protein 1 OS=Homo sapiens GN=ARFGAP1 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.602e-19 Identity = 43/92 (46.74%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 20 MCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFK-QHGWTDGGKIEAKYTSRAAELYK 292 +CF+C A NP W SVTYGI++C++CS HR LGVH+SFVRS +D W +L+ M GGN + + F + Q + ++ KY SRAA L++ Sbjct: 21 VCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKMKAGGNAKFREFLESQEDYDPCWSLQEKYNSRAAALFR 112
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: GCS1_YEAST (ADP-ribosylation factor GTPase-activating protein GCS1 OS=Saccharomyces cerevisiae GN=GCS1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.093e-17 Identity = 42/95 (44.21%), Postives = 56/95 (58.95%), Query Frame = 2 Query: 17 KMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQIL 301 K C DC A NP WA+ +G F+C++C+ +HR LGVHISFVRS +D + E+L M GGN +FK H + KY + AE YK+ L Sbjct: 24 KKCMDCGAPNPQWATPKFGAFICLECAGIHRGLGVHISFVRSITMDQFKPEELLRMEKGGNEPLTEWFKSHNIDLSLPQKVKYDNPVAEDYKEKL 118
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: SMAP1_HUMAN (Stromal membrane-associated protein 1 OS=Homo sapiens GN=SMAP1 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.579e-16 Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 2 Query: 17 KMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFK 223 K C DC AK P WAS G+F+CI C+ +HR+LGVHIS V+S NLD W+AEQ++ M GN +A++ ++ Sbjct: 31 KYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYE 99
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: SMAP1_MOUSE (Stromal membrane-associated protein 1 OS=Mus musculus GN=Smap1 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.999e-16 Identity = 35/69 (50.72%), Postives = 49/69 (71.01%), Query Frame = 2 Query: 17 KMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFK 223 K C DC AK P WAS G+F+CI C+ +HR+LGVHIS V+S NLD W+ EQ++ M GN +A++ ++ Sbjct: 31 KYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTPEQIQCMQDMGNTKARLLYE 99
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: AGD5_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD5 OS=Arabidopsis thaliana GN=AGD5 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.835e-16 Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 2 Query: 5 HAPRKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFK 223 H + C DC K P WASV GIF+C+ CS +HRSLGVHIS VRS LD+W EQ+ + GN++A +++ Sbjct: 25 HPENRECADCKTKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNDKANSYWE 97
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: SMAP2_CHICK (Stromal membrane-associated protein 2 OS=Gallus gallus GN=SMAP2 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.745e-15 Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 2 Query: 17 KMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFK 223 K C DC AK P WAS G+F+CI C+ +HR+LGVHIS V+S NLD W+ EQ++ M GN +A ++ Sbjct: 26 KYCADCQAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYE 94
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: SMAP2_MOUSE (Stromal membrane-associated protein 2 OS=Mus musculus GN=Smap2 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.280e-15 Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 2 Query: 17 KMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFKQH 229 K C DC +K P WAS G+F+CI C+ +HR+LGVHIS V+S NLD W+ EQ++ M GN +A ++ + Sbjct: 26 KFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAY 96 The following BLAST results are available for this feature:
BLAST of CX043710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043710 ID=CX043710; Name=CX043710; organism=Citrus sinensis; type=EST; length=773bpback to top |