CK936758

Overview
NameCK936758
Unique NameCK936758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.620e-42
Identity = 85/134 (63.43%), Postives = 96/134 (71.64%), Query Frame = 1
Query:  283 GVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVFVFPQGLIXXXFNIGKTN-AAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLEGTLYVGFVTS+Q N  N L  K LNKGDVFVFPQGLI   FN      A A +AL+SQ PG +TIA+AVFG+N  I+ D L KAF
Sbjct:   76 GSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNSPISDDVLAKAF 209          

HSP 2 Score: 39.6614 bits (91), Expect = 1.620e-42
Identity = 24/50 (48.00%), Postives = 28/50 (56.00%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFF-SGLGKPGNT 271
            +DP  LQD CVA  D    V VNG  CKD K    +DFF  + L KP +T
Sbjct:   23 SDPSPLQDFCVA--DRNSPVHVNGFPCKDAKDVNVDDFFLAANLDKPMDT 70          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.670e-42
Identity = 84/134 (62.69%), Postives = 97/134 (72.39%), Query Frame = 1
Query:  283 GVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVFVFPQGLIXXXFNIGKTN-AAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EI  V+EG+LYVGFVTS+Q N  N L  K LNKGDVFVFP+GLI   FN      AAA  AL+SQ PG +TIA+AVFG+NP I+ D L KAF
Sbjct:   76 GSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFNPSYDKPAAAIVALSSQNPGAITIANAVFGSNPPISDDVLAKAF 209          

HSP 2 Score: 38.5058 bits (88), Expect = 4.670e-42
Identity = 23/47 (48.94%), Postives = 27/47 (57.45%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFF-SGLGKP 262
            +DP  LQD+CVA  D    V VNG  CKD K    +DFF  + L KP
Sbjct:   23 SDPSPLQDLCVA--DKNSPVRVNGFPCKDAKDVSVDDFFLAANLDKP 67          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 1.754e-41
Identity = 83/134 (61.94%), Postives = 96/134 (71.64%), Query Frame = 1
Query:  283 GVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVFVFPQGLIXXXFNIGKTN-AAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            G + T  NV ++ GLNTL IS  RIDYAP GQ PPH HPRA+EI  VLEG+LYVGFVTS+Q N  N L  K LNKGDVFVFPQGLI   FN      A A +AL+SQ PG +TIA+AVFG++P I+ D L KAF
Sbjct:   76 GSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSHPPISDDVLAKAF 209          

HSP 2 Score: 38.891 bits (89), Expect = 1.754e-41
Identity = 24/50 (48.00%), Postives = 28/50 (56.00%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFF-SGLGKPGNT 271
            +DP  LQD CVA  D    V VNG  CKD K    +DFF  + L KP +T
Sbjct:   23 SDPSPLQDFCVA--DKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDT 70          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.281e-41
Identity = 82/155 (52.90%), Postives = 107/155 (69.03%), Query Frame = 1
Query:  211 PQACESRRFLLLRARQAWKHSKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            P+  +++ F           +   G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEI +++EGTLYVGFV+S+Q NN L AKVL+ GDVFVFP G+I    N+GK  A A++ L+SQ  G +TIA+ VFG+NP I P+ L +AF
Sbjct:   51 PKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAF 205          

HSP 2 Score: 78.5666 bits (192), Expect = 3.420e-14
Identity = 41/75 (54.67%), Postives = 48/75 (64.00%), Query Frame = 2
Query:   59 MKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRL 283
            M+V Q L+ F             DP  LQD CVAI+D K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQV 74          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.281e-41
Identity = 83/155 (53.55%), Postives = 107/155 (69.03%), Query Frame = 1
Query:  211 PQACESRRFLLLRARQAWKHSKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            P+  +++ F           +   G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEI +++EGTLYVGFV+S+Q NN L AKVL+ GDVFVFP G+I    NIGK  A A++ L+SQ  G +TIA+ VFG+NP I P+ L +AF
Sbjct:   51 PERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAF 205          

HSP 2 Score: 77.0258 bits (188), Expect = 9.949e-14
Identity = 41/75 (54.67%), Postives = 48/75 (64.00%), Query Frame = 2
Query:   59 MKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRL 283
            M+V Q LI F             DP  LQD CVAI+D K GVFVNG+FCKDP+   A+DFFFSGL  PGNT N++
Sbjct:    1 MRVSQSLIPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQV 74          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.597e-41
Identity = 82/155 (52.90%), Postives = 107/155 (69.03%), Query Frame = 1
Query:  211 PQACESRRFLLLRARQAWKHSKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            P+  +++ F           +   G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEI +++EGTLYVGFV+S+Q NN L AKVL+ GDVFVFP G+I    N+GK  A A++ L+SQ  G +TIA+ VFG+NP I P+ L +AF
Sbjct:   51 PKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAF 205          

HSP 2 Score: 78.1814 bits (191), Expect = 4.466e-14
Identity = 41/75 (54.67%), Postives = 48/75 (64.00%), Query Frame = 2
Query:   59 MKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRL 283
            M+V Q L+ F             DP  LQD CVAI+D K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQV 74          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.458e-40
Identity = 79/132 (59.85%), Postives = 94/132 (71.21%), Query Frame = 1
Query:  283 GVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTN-AAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            G + T+ NV + PGLNTLGIS  RIDYAP G  PPHIHPRA+E+  VLEGTLYVGFVTS+   N L +KV+ KGDVFVFP+ +I    N+     A A SAL+SQ PG +TIA AVFG+ P I+ D L KAF
Sbjct:   76 GSNVTNLNVMEFPGLNTLGISLARIDYAPMGVNPPHIHPRATELLTVLEGTLYVGFVTSNP--NKLFSKVVCKGDVFVFPKAMIHFQMNLDHDKPAVAQSALSSQNPGVITIASAVFGSQPPISDDVLTKAF 205          

HSP 2 Score: 41.2022 bits (95), Expect = 1.458e-40
Identity = 28/71 (39.44%), Postives = 33/71 (46.48%), Query Frame = 2
Query:   74 FLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRL 283
            FL+G              DP  LQD CVA  D    V VNG  CK+P    +EDFF +     P NT N+L
Sbjct:    7 FLLGALLVLASWQAIVAYDPSPLQDFCVA--DMNSPVRVNGFACKNPMDVSSEDFFNAAKFDMPRNTFNKL 75          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.127e-40
Identity = 89/155 (57.42%), Postives = 101/155 (65.16%), Query Frame = 1
Query:  211 PQACESRRFLLLRARQAWKHSKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            P A     F       A   S   G   T  NV QI GLNTLGIS  R+DYAPYG  PPHIHPRA+EI  +LEG+LYVGFVTS+   N L  KVLNKGDVFVFPQGLI   FN G  +  A +AL+SQ PG +TIA+AVFG+ P I+ D L KAF
Sbjct:   49 PAAITVEDFFFSGLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTILEGSLYVGFVTSNP-ENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVITIANAVFGSKPFISDDILAKAF 202          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.296e-40
Identity = 78/132 (59.09%), Postives = 93/132 (70.45%), Query Frame = 1
Query:  283 GVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTN-AAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            G + T+ NV   PGLNTLGIS  RIDYAP G  PPHIHPRA+E+  VLEGTLYVGFVTS+   N L +KV++KGD FVFP+ +I    N+     A A S+LNSQ PG +TIA AVFG+ P I+ D L KAF
Sbjct:   76 GSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNSQNPGVITIASAVFGSKPPISDDVLTKAF 205          

HSP 2 Score: 38.5058 bits (88), Expect = 9.296e-40
Identity = 23/53 (43.40%), Postives = 30/53 (56.60%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRL 283
            DP  LQD CVA  D K  V VNG  CK+P    ++DFF +     P +T N++
Sbjct:   25 DPSPLQDFCVA--DMKSPVRVNGFPCKNPMEVNSDDFFNAAKFDMPRSTMNKV 75          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.379e-39
Identity = 87/138 (63.04%), Postives = 101/138 (73.19%), Query Frame = 1
Query:  265 KHSKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTN-AAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            + +   G + T  NV QIPGLNTLGIS  RIDYAP G+ PPH HPRA+EI  VLEGTLYVGFVTS+  NNTL +KVLNKGDVFVFP+GLI   FN      A A +AL+SQ PG +TIA+AVFG+ P I+ D L KAF
Sbjct:   69 RKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNPGAITIANAVFGSKPPISDDILAKAF 205          
The following BLAST results are available for this feature:
BLAST of CK936758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL122_ORYSJ1.620e-4263.43Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL123_ORYSJ4.670e-4262.69Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
GL124_ORYSJ1.754e-4161.94Putative germin-like protein 12-4 OS=Oryza sativa ... [more]
GL118_ARATH3.281e-4152.90Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL116_ARATH3.281e-4153.55Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL120_ARATH5.597e-4152.90Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL812_ORYSJ1.458e-4059.85Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]
GL21_ORYSJ2.127e-4057.42Putative germin-like protein 2-1 OS=Oryza sativa s... [more]
GL84_ORYSJ9.296e-4059.09Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL87_ORYSJ1.379e-3963.04Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004518_D03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936758 ID=CK936758; Name=CK936758; organism=Citrus sinensis; type=EST; length=677bp
GAGGAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGACT
TAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGCT
TTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATGT
CTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAGT
TCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGGG
CTAGGCAAGCCTGGAAACACAGCAAATCGACTGGTGTTGATGAAACAGAT
GCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCATT
CCGTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACCCCC
GTGCCAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTTT
GTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAATAA
GGGAGATGTTTTTGTGTTTCCACAAGGTTTGATTCANNNNNAATTCAACA
TTGGAAAAACAAATGCAGCTGCCTATTCTGCTCTAAACAGCCAATTCCCG
GGTGAAGTTACCATAGCCGACGCAGTCTTTGGAGCCAATCCTTCAATCAA
TCCCGATTTTCTTGGCAAGGCATTCCA
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