CK936758

Overview
NameCK936758
Unique NameCK936758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.138e-34
Identity = 63/135 (46.67%), Postives = 87/135 (64.44%), Query Frame = 1
Query:  271 SKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            S   GV    ANV   PGLNTLGIS   ++ AP G  PPH+HPRA+E+  V+EG+++VGF+++   NNTL +KVLN G+ FV P+GL+   +N+G+  A   +A NSQ PG V +   +FG+ P I    L +AF
Sbjct:   73 SNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVGTVIEGSVFVGFLST---NNTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPSTLFGSKPEIPNAVLTRAF 204          

HSP 2 Score: 38.1206 bits (87), Expect = 5.138e-34
Identity = 23/51 (45.10%), Postives = 28/51 (54.90%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTAN 277
            +D   LQD CV   D K    +NG  CK      A DFF+SGLG P +T+N
Sbjct:   28 SDSDPLQDFCVG--DLKASASINGFPCKSA--VSASDFFYSGLGGPLDTSN 74          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.476e-33
Identity = 79/179 (44.13%), Postives = 107/179 (59.78%), Query Frame = 1
Query:  172 QGWCVCEWEVLQGP-----------QACESRRFLLLRARQAWKHSKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            Q  CV +++ L+GP           +   +  F       A   + + G   T A+VE++PGLNT+G+S  RIDYAP+G  PPH HPRA+EI  V EGTL VGFVT+    N L  + ++KG+VFVFP+GL+    N G T+A A +A NSQ PG  +IAD +FGA P +  D L +AF
Sbjct:   29 QDVCVADYKSLRGPLRLNGIPCKRLENVTANDFFFDGLTNAGNTTNAVGSLVTAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFVTT---ANKLFTRTVSKGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQSIADTLFGAAPPLPSDTLARAF 204          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.926e-33
Identity = 67/127 (52.76%), Postives = 82/127 (64.57%), Query Frame = 1
Query:  295 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            T ANV++IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+T+    N LIAK + KG+ FVFP+GL+    N G   A   +  NSQ PG V I   +F A P +  + L KAF
Sbjct:   76 TGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITT---TNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPVPDNVLTKAF 199          

HSP 2 Score: 36.5798 bits (83), Expect = 1.926e-33
Identity = 23/50 (46.00%), Postives = 26/50 (52.00%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTAN 277
            D   LQD+CVA  D    + VNG  CK      AEDFF + L K G T N
Sbjct:   22 DADALQDLCVA--DYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNN 69          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.132e-32
Identity = 79/179 (44.13%), Postives = 106/179 (59.22%), Query Frame = 1
Query:  172 QGWCVCEWEVLQGP-----------QACESRRFLLLRARQAWKHSKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            Q  CV +++ L+GP           +   +  F      +A     + G   T A+VE +PGLNT+G+S  RIDYAP+G  PPH HPRA+EI  V+EG+L VGFVT+    N L  + + KG+VFVFP+GL+    N G T A A +ALNSQ PG  +IA A+FGA P +  D L +AF
Sbjct:   29 QDVCVADYKSLKGPLRLNGFPCKRIENVTANDFFFDGLMKAGNTGNAVGSVVTAASVESLPGLNTMGVSMARIDYAPWGLNPPHTHPRATEIIFVVEGSLDVGFVTT---ANKLFTRTVCKGEVFVFPRGLVHFQKNNGNTPAFAIAALNSQLPGTQSIAAALFGAAPPLPSDTLARAF 204          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.784e-32
Identity = 71/131 (54.20%), Postives = 89/131 (67.94%), Query Frame = 1
Query:  283 GVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            G   T ANVEQ+PGLNTLG+S  RIDYAP G  PPH HPRASE+  V+EG L VGF+T+    N L++K + KG+VFVFP+GL+    N GK  AA  SA NSQ PG  +I   +FGA+P++  D L + F
Sbjct:   82 GSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITT---ANVLVSKQITKGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQLPGTQSIPITLFGASPTVPDDVLAQTF 209          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.585e-32
Identity = 61/139 (43.88%), Postives = 86/139 (61.87%), Query Frame = 1
Query:  256 QAWKHSKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKA 672
            +A   S   G   T+ +V + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+   FN+GKT A+   + NSQ PG V +   +FG+NP I    L KA
Sbjct:   67 KAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKA 205          

HSP 2 Score: 40.817 bits (94), Expect = 4.585e-32
Identity = 27/51 (52.94%), Postives = 29/51 (56.86%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTA 274
            TDP  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+
Sbjct:   24 TDPDPLQDFCVADLDGK-AVSVNGHTCK-PMSEAGDDFLFSSKLAKAGNTS 72          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.237e-31
Identity = 62/139 (44.60%), Postives = 84/139 (60.43%), Query Frame = 1
Query:  256 QAWKHSKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKA 672
            +A   S   G   TD NV + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+   FN+GKT A+     NSQ P  V +   +FG+NP I    L KA
Sbjct:   67 KAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVFFNSQSPSVVFVPLTLFGSNPPIPKPVLTKA 205          

HSP 2 Score: 37.7354 bits (86), Expect = 2.237e-31
Identity = 25/51 (49.02%), Postives = 29/51 (56.86%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTA 274
            ++P  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+
Sbjct:   24 SNPHPLQDFCVADLDGK-AVSVNGHMCK-PMSEAGDDFLFSSKLAKAGNTS 72          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.912e-31
Identity = 60/139 (43.17%), Postives = 86/139 (61.87%), Query Frame = 1
Query:  256 QAWKHSKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKA 672
            +A   S   G   T+ +V + PG NTLG+S  R+D+AP G  PPH+HPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+   FN+GKT A+   + NSQ PG V +   +FG+NP I    L KA
Sbjct:   67 KAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKA 205          

HSP 2 Score: 38.5058 bits (88), Expect = 2.912e-31
Identity = 26/51 (50.98%), Postives = 29/51 (56.86%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTA 274
            +DP  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+
Sbjct:   24 SDPDPLQDFCVADLDGK-AVSVNGHPCK-PMSEAGDDFLFSSKLAKAGNTS 72          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.079e-31
Identity = 69/127 (54.33%), Postives = 87/127 (68.50%), Query Frame = 1
Query:  295 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            T ANVEQ+PGLNTLG+S  RIDYAP G  PPH HPRASE+  V+EG L VGF+T+    N L++K + KG+VFVFP+GL+    N G+  AA  SA NSQ PG  +I   +FGA+P +  D L + F
Sbjct:   86 TTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITT---ANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTF 209          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 8.398e-31
Identity = 61/139 (43.88%), Postives = 85/139 (61.15%), Query Frame = 1
Query:  256 QAWKHSKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKA 672
            +A   S   G   T+ +V + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ FV P+GL+   FN+GKT A    + NSQ PG V +   +FG++P I    L KA
Sbjct:   44 KAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKA 182          

HSP 2 Score: 38.5058 bits (88), Expect = 8.398e-31
Identity = 26/51 (50.98%), Postives = 29/51 (56.86%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTA 274
            +DP  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+
Sbjct:    1 SDPDPLQDFCVADLDGK-AVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTS 49          
The following BLAST results are available for this feature:
BLAST of CK936758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GLT1_ARATH5.138e-3446.67Germin-like protein subfamily T member 1 OS=Arabid... [more]
GL32_ORYSJ1.476e-3344.13Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
RHRE_PEA1.926e-3352.76Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GL13_ORYSJ2.132e-3244.13Germin-like protein 1-3 OS=Oryza sativa subsp. jap... [more]
NEC1_NICPL2.784e-3254.20Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]
GER2_WHEAT4.585e-3243.88Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
GER3_WHEAT2.237e-3144.60Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
OXO2_HORVU2.912e-3143.17Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
NEC1_NICLS3.079e-3154.33Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
OXO1_HORVU8.398e-3143.88Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004518_D03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936758 ID=CK936758; Name=CK936758; organism=Citrus sinensis; type=EST; length=677bp
GAGGAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGACT
TAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGCT
TTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATGT
CTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAGT
TCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGGG
CTAGGCAAGCCTGGAAACACAGCAAATCGACTGGTGTTGATGAAACAGAT
GCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCATT
CCGTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACCCCC
GTGCCAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTTT
GTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAATAA
GGGAGATGTTTTTGTGTTTCCACAAGGTTTGATTCANNNNNAATTCAACA
TTGGAAAAACAAATGCAGCTGCCTATTCTGCTCTAAACAGCCAATTCCCG
GGTGAAGTTACCATAGCCGACGCAGTCTTTGGAGCCAATCCTTCAATCAA
TCCCGATTTTCTTGGCAAGGCATTCCA
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