CK936758

Overview
NameCK936758
Unique NameCK936758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.921e-22
Identity = 50/112 (44.64%), Postives = 64/112 (57.14%), Query Frame = 1
Query:  295 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVF 630
            T A   Q PGLN LG+S  R+D AP G  P H HP ASE+  VL G++  GFV+S    N +  + L  G V VFPQGL+    N GK++A+A    NS  PG   +  A+F
Sbjct:   69 TPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFVSS---ANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPGLQILDFALF 177          

HSP 2 Score: 36.965 bits (84), Expect = 1.921e-22
Identity = 22/46 (47.83%), Postives = 25/46 (54.35%), Query Frame = 2
Query:  140 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTAN 277
            +QD CVA  + K      G  C  P   +A DF FSGLG PGNT N
Sbjct:   19 VQDFCVA--NLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNTTN 62          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.498e-22
Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 1
Query:  295 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVF 630
            T A      G+N LG+S  R+D A  G  P H HP ASE+ +V++GT+  GF++S    N +  K LN+GD  VFPQGL+    N GK  A A+ A  S  PG   +  A+F
Sbjct:   72 TPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISS---ANKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALF 180          

HSP 2 Score: 42.743 bits (99), Expect = 2.498e-22
Identity = 22/46 (47.83%), Postives = 27/46 (58.70%), Query Frame = 2
Query:  140 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTAN 277
            +QD CVA  DPK     +G  CK+P      DF F+GLG  GNT+N
Sbjct:   22 VQDFCVA--DPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSN 65          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 3.250e-22
Identity = 46/112 (41.07%), Postives = 62/112 (55.36%), Query Frame = 1
Query:  295 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVF 630
            T A      GLN L +S  R+D A  G  P H HP ASE+ +V++GT+  GF++S    N +  K L++GD  VFPQGL+    N GK  A A+ A  S  PG   +  A+F
Sbjct:   72 TPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISS---ANKVYLKTLSRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALF 180          

HSP 2 Score: 45.8246 bits (107), Expect = 3.250e-22
Identity = 24/46 (52.17%), Postives = 28/46 (60.87%), Query Frame = 2
Query:  140 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTAN 277
            +QD CVA  DPK     +G  CK+P      DF FSGLGK GNT+N
Sbjct:   22 VQDFCVA--DPKGPQNPSGYSCKNPDQVTENDFAFSGLGKAGNTSN 65          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.301e-22
Identity = 50/112 (44.64%), Postives = 63/112 (56.25%), Query Frame = 1
Query:  313 QIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSI 648
            + PGLNTLGIS  R D A  G   PH HPRASE+  V  G++  GF  +      L  K L +GDVF+FP+GL+    N G   A  +S LNSQ PG V I  A+F  +  +
Sbjct:   86 EFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDT---KGKLFQKTLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPGVVGITHAMFAPDSEV 194          

HSP 2 Score: 34.2686 bits (77), Expect = 9.301e-22
Identity = 19/51 (37.25%), Postives = 24/51 (47.06%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTAN 277
            +D   LQDVC      +  +F+NG FCK P    A DF    L   G+  N
Sbjct:   23 SDSPPLQDVCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNHAGDLDN 73          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.693e-21
Identity = 64/148 (43.24%), Postives = 77/148 (52.03%), Query Frame = 1
Query:  235 FLLLRARQAWKHSKSTGVDETDANVEQIPGLNTLGISAFRIDY-APYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            F     R A   S  TG         Q PGL+TLG+S  R D  A  G  PPH HPRA+E  LVL G +Y GFV S      L AKVL +G+V VFP+ ++    N+G T A  Y A NS+ PG V I   VFG+   I    L +AF
Sbjct:   63 FAFSGVRAAGNFSPETGFAGVSVTPAQFPGLHTLGMSFARADLSAAGGVNPPHYHPRATETALVLAGRVYAGFVDS---GGRLFAKVLEQGEVMVFPRAMVHFQLNVGDTPATVYGAFNSENPGIVRIPATVFGS--GIREAVLERAF 205          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.923e-21
Identity = 48/121 (39.67%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  316 IPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIG-KTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            +PG N  G++  RID AP G  PPH HPRASE  LVL G++ VGF  +   +  L  ++L  G+ FVFP+ ++   +N+     A   S LNSQ PG   +  + F   P +  + L KAF
Sbjct:   91 LPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFADT---SYRLYTQLLRAGEAFVFPRAMVHFLYNMDTAAPAVVLSGLNSQSPGAQLVPFSAFRTEPRLPDEVLKKAF 208          

HSP 2 Score: 33.4982 bits (75), Expect = 9.923e-21
Identity = 24/55 (43.64%), Postives = 27/55 (49.09%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKD--GVF-VNGKFCKDPKLARAEDFFFSGLGKPGNTANRL 283
            DP  L D CVA        G F +NG  C DP LARA+ F  S L +  N A  L
Sbjct:   23 DPDLLFDYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALSRATNPAATL 77          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.681e-20
Identity = 50/113 (44.25%), Postives = 69/113 (61.06%), Query Frame = 1
Query:  301 ANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGAN 639
            A V+Q P +N LGISA R+D  P G  P H HP  SE+  VL+G L  GF++S   +N +  K ++KG +FVFPQGL+   +N G T A A++A +S  PG   +  A+F  N
Sbjct:   81 AFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSS--DNKVYYKEVSKGGMFVFPQGLLHFQYNTGDTTAVAFAAYSSSNPGLQILDYALFANN 191          

HSP 2 Score: 26.5646 bits (57), Expect = 1.681e-20
Identity = 15/41 (36.59%), Postives = 19/41 (46.34%), Query Frame = 2
Query:  143 QDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPG 265
            QD CVA N P      +G  C+      A DF+   L +PG
Sbjct:   29 QDFCVA-NLPLGADTPSGYQCRPAATVTAADFYSGALARPG 68          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.190e-20
Identity = 50/112 (44.64%), Postives = 64/112 (57.14%), Query Frame = 1
Query:  295 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVF 630
            T   V Q P LN LGIS  R+D AP G  P H HP ASE+  VL+G++  GF++S    N++  + L  G V VFPQGL+    N GKT AAA    +S  PG   +  A+F
Sbjct:   68 TPGFVAQFPALNGLGISTARLDLAPKGVIPMHTHPGASEVLFVLDGSITAGFISS---ANSVYVQTLKPGQVMVFPQGLLHFQINAGKTPAAALVTFSSASPGLQILDFALF 176          

HSP 2 Score: 30.4166 bits (67), Expect = 2.190e-20
Identity = 21/46 (45.65%), Postives = 24/46 (52.17%), Query Frame = 2
Query:  140 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTAN 277
            +QD CVA  + K      G  C  P   +A DF FS LG PGNT N
Sbjct:   19 VQDFCVA--NLKRAETPAGYPCIRPIHVKASDFVFS-LGTPGNTTN 61          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.170e-20
Identity = 61/166 (36.75%), Postives = 83/166 (50.00%), Query Frame = 1
Query:  157 SHQ*PQGWCVCEWEVLQGPQACESRRFLLLRARQ--------AWKHSKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVF 630
            SH   Q +CV +++   GP     ++  ++            A   +       T A   Q PG+N LGIS  R+D  P G  P H HP ASE+ LV++GT+  GFV SD   NT   K L KGD+ VFPQGL+    N G T A A+ + +S  PG   +  A+F
Sbjct:   16 SHASVQDFCVADYKAPDGPAGYSCKKPAIVTVNDFVYSGLGIAGNTTNIFKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPGLQIVDFALF 178          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.114e-20
Identity = 62/166 (37.35%), Postives = 83/166 (50.00%), Query Frame = 1
Query:  157 SHQ*PQGWCVCEWEVLQGPQACESRR--------FLLLRARQAWKHSKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVF 630
            SH   Q +CV +++   GP     ++        F+      A   +       T A   Q PG+N LGIS  R+D  P G  P H HP ASE+ LV++GT+  GFV SD   NT   K L KGD+ VFPQGL+    N G T A A+ + +S  PG   +  A+F
Sbjct:   16 SHASVQDFCVADYKAPDGPAGYSCKKPAKVTINDFVYSGLGIAGNTTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPGLQILDFALF 178          
The following BLAST results are available for this feature:
BLAST of CK936758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL31_ARATH1.921e-2244.64Germin-like protein subfamily 3 member 1 OS=Arabid... [more]
GL33_ARATH2.498e-2241.96Germin-like protein subfamily 3 member 3 OS=Arabid... [more]
GLP1_SINAL3.250e-2241.07Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2... [more]
GL111_ORYSJ9.301e-2244.64Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]
GL24_ORYSJ1.693e-2143.24Germin-like protein 2-4 OS=Oryza sativa subsp. jap... [more]
GL31_ORYSJ9.923e-2139.67Germin-like protein 3-1 OS=Oryza sativa subsp. jap... [more]
GL813_ORYSJ1.681e-2044.25Germin-like protein 8-13 OS=Oryza sativa subsp. ja... [more]
GLP1_BRANA2.190e-2044.64Germin-like protein 1 OS=Brassica napus GN=GER1 PE... [more]
AB19B_PRUPE4.170e-2036.75Auxin-binding protein ABP19b OS=Prunus persica GN=... [more]
AB19A_PRUPE7.114e-2037.35Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004518_D03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936758 ID=CK936758; Name=CK936758; organism=Citrus sinensis; type=EST; length=677bp
GAGGAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGACT
TAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGCT
TTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATGT
CTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAGT
TCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGGG
CTAGGCAAGCCTGGAAACACAGCAAATCGACTGGTGTTGATGAAACAGAT
GCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCATT
CCGTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACCCCC
GTGCCAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTTT
GTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAATAA
GGGAGATGTTTTTGTGTTTCCACAAGGTTTGATTCANNNNNAATTCAACA
TTGGAAAAACAAATGCAGCTGCCTATTCTGCTCTAAACAGCCAATTCCCG
GGTGAAGTTACCATAGCCGACGCAGTCTTTGGAGCCAATCCTTCAATCAA
TCCCGATTTTCTTGGCAAGGCATTCCA
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