CK936709
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936709 vs. ExPASy Swiss-Prot
Match: RS3_NANEQ (30S ribosomal protein S3P OS=Nanoarchaeum equitans GN=rps3p PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.511e-11 Identity = 57/208 (27.40%), Postives = 94/208 (45.19%), Query Frame = 1 Query: 130 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL-AVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 750 RKF+ + E + L S V +R TP+ +II + R + + E R L +++ +F + +E+ + N L A AE L + + A RR L IM +GA G E++++G+L QR K+ +FK G + +G +D A L+ GV GI V I+ P +PD++ SP++ Sbjct: 7 RKFIQNAKLTVFSQEFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMISEE---RKAHLAKLLELKFGLEKPVIEVLP--IENPNLDAHVIAERLAMGIERNIRAYRRLAQRYLETIMNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTGTIGQFELDRAFNIAYLKPGVAGIHVTIL---------KPDAEIPDIIEFKSPEE 200
BLAST of CK936709 vs. ExPASy Swiss-Prot
Match: RS3_FRATT (30S ribosomal protein S3 OS=Francisella tularensis subsp. tularensis GN=rpsC PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.497e-11 Identity = 52/170 (30.59%), Postives = 87/170 (51.18%), Query Frame = 1 Query: 163 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 669 ++ E L ++LA S +++ +I I R+ V+G+KG + +L + V K P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VSG+L A+ A+S +DG + Q +D A L GV+G+KV I Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARSGIVIGKKGEDVEKLRAEVHKLMGIP---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEWARDGRVPL--QTFRADVDYATAEALTTYGVIGVKVWI 202
BLAST of CK936709 vs. ExPASy Swiss-Prot
Match: RS3_FRAT1 (30S ribosomal protein S3 OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=rpsC PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.497e-11 Identity = 52/170 (30.59%), Postives = 87/170 (51.18%), Query Frame = 1 Query: 163 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 669 ++ E L ++LA S +++ +I I R+ V+G+KG + +L + V K P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VSG+L A+ A+S +DG + Q +D A L GV+G+KV I Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARSGIVIGKKGEDVEKLRAEVHKLMGIP---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEWARDGRVPL--QTFRADVDYATAEALTTYGVIGVKVWI 202 The following BLAST results are available for this feature:
BLAST of CK936709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936709 ID=CK936709; Name=CK936709; organism=Citrus sinensis; type=EST; length=900bpback to top |