CN186868

Overview
NameCN186868
Unique NameCN186868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186868 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.392e-19
Identity = 43/69 (62.32%), Postives = 57/69 (82.61%), Query Frame = 2
Query:   11 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK 208
            YY+ILG+   A++D++KKAYRK A+K HPDK  +P   EKFKE+A+AY+VLSDP+KR +YDQYGE+ LK
Sbjct:    5 YYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRSLYDQYGEEGLK 73          
BLAST of CN186868 vs. ExPASy Swiss-Prot
Match: DNAJ_PORGI (Chaperone protein dnaJ OS=Porphyromonas gingivalis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.392e-19
Identity = 76/218 (34.86%), Postives = 97/218 (44.50%), Query Frame = 2
Query:   11 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA-----HDPFD-----IXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVI-XXXXXXXXXXXXXXXXXXXXQGSGM--KVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKV 613
            YYE+LGVSKNA+ D+LKKAYRK AI+ HPDK  GD    E FKE+A+AY+VLSDP+KR  YDQ+G   L                D F                               D+   +K+SL D+  G  KK+ + + V+                      G+G+  +VS   LG     Q Q  C  C G GE I     C +CKGE V
Sbjct:    7 YYEVLGVSKNATDDELKKAYRKKAIQYHPDKNPGDKEAEEHFKEVAEAYDVLSDPQKRSQYDQFGHAGLGGAAGGGFSGGGMSMEDIFSRFGDLFGGFGGFGGFSDMGGGSRRRVRRGSDLRVRVKLSLADISKGVEKKVKVKKQVVCSKCRGDGTEEANGKTTCQTCHGTGVVTRVSNTFLG---AMQTQSTCPTCHGEGEIITKP--CSKCKGEGV 219          
BLAST of CN186868 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.375e-19
Identity = 43/69 (62.32%), Postives = 57/69 (82.61%), Query Frame = 2
Query:   11 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK 208
            YY+ILG+   A++D++KKAYRK A+K HPDK  +P   EKFKE+A+AY+VLSDP+KR +YDQYGE+ LK
Sbjct:    5 YYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLK 73          
BLAST of CN186868 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.375e-19
Identity = 43/69 (62.32%), Postives = 57/69 (82.61%), Query Frame = 2
Query:   11 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK 208
            YY+ILG+   A++D++KKAYRK A+K HPDK  +P   EKFKE+A+AY+VLSDP+KR +YDQYGE+ LK
Sbjct:    5 YYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLK 73          
BLAST of CN186868 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.375e-19
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 2
Query:   11 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK 208
            YY ILG+ K AS +D+KKAYRK A++ HPDK   P   E+FKE+A+AYEVLSDP+KREIYDQ+GE+ LK
Sbjct:    5 YYCILGIEKGASDEDIKKAYRKQALRFHPDKNKSPQAEERFKEVAEAYEVLSDPKKREIYDQFGEEGLK 73          
BLAST of CN186868 vs. ExPASy Swiss-Prot
Match: DNAJ_HAMD5 (Chaperone protein dnaJ OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.375e-19
Identity = 69/221 (31.22%), Postives = 103/221 (46.61%), Query Frame = 2
Query:   11 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKK 628
            YYEILG++KNA++ D+K AY++ A K HPD+  D +   KFKE+ +AYEVLSD +KR  YDQ+G  A  E        H+  +                         D+ + L ++LE+   G SK++ ++  V                     +GSG K         + R +G   +QQ    +Q  C  C G G+ I  KD C QC+G+  ++E K
Sbjct:    6 YYEILGIAKNANEQDIKDAYKRLAKKYHPDRNKDKDAETKFKEMKEAYEVLSDQQKRAAYDQHGHTAF-EQSGMGGGFHNSSNF-SNVFNDVFSDFFGGHQQRTQRGRDLRYTLNLTLEEAVRGASKEIHITTLV----------------HCEHCKGSGAKQGTRPVTCTTCRGVGEVHMQQGFFTIQQTCPRCHGQGQMI--KDPCRQCRGQGKVEEPK 206          
BLAST of CN186868 vs. ExPASy Swiss-Prot
Match: DNAJ_SACD2 (Chaperone protein dnaJ OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.102e-19
Identity = 69/212 (32.55%), Postives = 95/212 (44.81%), Query Frame = 2
Query:   11 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDAL--KEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKK 628
            YYE+LGVSK+ S  +LKKAYRK A+K HPD+  D     +KFKE ++AYEVLSD +KR  YDQYG   +           A +  DI                        D+ + L +SLED   GT+ K+ +   V                      G   +V ++  G   +QQ    C  C+G G+ I D   C +C G   ++E K
Sbjct:    6 YYEVLGVSKDVSPQELKKAYRKVAMKYHPDRNSDDPNSEDKFKEASEAYEVLSDAQKRAAYDQYGHAGVDGNAGMGGGAGAGNFSDIFGDVFGDIFGGGGGRRRGGPSRGSDLRYTLDLSLEDAVKGTTVKIRVPTLVSCKPCGGSGAKPGTSPQTCTTCGGHGQVRMQQ-GFFSVQQ---TCPNCRGQGKMITDP--CKECHGHGRVEETK 211          
BLAST of CN186868 vs. ExPASy Swiss-Prot
Match: SIS1_YEAST (Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.051e-19
Identity = 43/69 (62.32%), Postives = 59/69 (85.51%), Query Frame = 2
Query:    5 TKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALK 208
            TK Y++LGVS +A++ +LKK YRKAA+K HPDK  GD EKFKE+++A+E+L+DP+KREIYDQYG +A +
Sbjct:    5 TKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAAR 73          
BLAST of CN186868 vs. ExPASy Swiss-Prot
Match: XDJ1_YEAST (DnaJ protein homolog XDJ1 OS=Saccharomyces cerevisiae GN=XDJ1 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.291e-19
Identity = 64/234 (27.35%), Postives = 99/234 (42.31%), Query Frame = 2
Query:    8 KYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE-------KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDP---------FDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVI------XXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETI----NDKDRCPQCKGEKVIQEKKV 631
            + Y++LGV+++A+  ++K AYRK A+K+HPDK  D +       KFKE+  AYE+LSDPEK+  YD YG+D             D          F+                        +D+   + ++L+DLY G   K  L R VI                           G G K  ++  GP ++      C +C G G+      N K+ CP C G  ++ +K++
Sbjct:    9 RLYDVLGVTRDATVQEIKTAYRKLALKHHPDKYVDQDSKEVNEIKFKEITAAYEILSDPEKKSHYDLYGDDNGAASSGGANGFGDEDFMNFFNNFFNNGSHDGNNFPGEYDAYEEGNSTSSKDIDIDISLTLKDLYMGKKLKFDLKRQVICIKCHGSGWKPKRKIHVTHDVECESCAGKGSKERLKRFGPGLVASQWVVCEKCNGKGKYTKRPKNPKNFCPDCAGLGLLSKKEI 242          
BLAST of CN186868 vs. ExPASy Swiss-Prot
Match: DNAJ_STAES (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 12228) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.291e-19
Identity = 62/206 (30.10%), Postives = 98/206 (47.57%), Query Frame = 2
Query:   11 YYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPF-DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRH---LGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGE 607
            YYE+LGV+K+AS+D++KKAYRK + K HPD   + G  EKFKE+++AYEVLSD  KR  YDQ+G D  +            F                          +D+ + + ++ E+   GT K++S+ ++V                          +VS+     LG    +Q+   C +C+G+G+    ++ CP CKG+
Sbjct:    6 YYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRANYDQFGHDGPQGGFGSQGFGGSDFGGFEDIFSSFFGGGSRQRDPNAPRKGDDLQYTMTITFEEAVFGTKKEISIKKDVTCHTCNGDGAKPGTSKKTCSYCNGAGRVSVEQNTILGRVRTEQV---CPKCEGSGQEF--EEPCPTCKGK 206          
The following BLAST results are available for this feature:
BLAST of CN186868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJB5_MOUSE1.392e-1962.32DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNAJ_PORGI1.392e-1934.86Chaperone protein dnaJ OS=Porphyromonas gingivalis... [more]
DNJB5_HUMAN2.375e-1962.32DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN2.375e-1962.32DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNJB4_BOVIN2.375e-1965.22DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DNAJ_HAMD52.375e-1931.22Chaperone protein dnaJ OS=Hamiltonella defensa sub... [more]
DNAJ_SACD23.102e-1932.55Chaperone protein dnaJ OS=Saccharophagus degradans... [more]
SIS1_YEAST4.051e-1962.32Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 P... [more]
XDJ1_YEAST5.291e-1927.35DnaJ protein homolog XDJ1 OS=Saccharomyces cerevis... [more]
DNAJ_STAES5.291e-1930.10Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003I23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003I23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186868 ID=CN186868; Name=CN186868; organism=Citrus sinensis; type=EST; length=633bp
CTTTACAAAGTACTATGAGATTCTCGGAGTCTCGAAAAACGCTTCGCAAG
ATGATCTGAAGAAGGCTTATAGGAAAGCCGCCATCAAAAACCATCCTGAC
AAGGGCGGTGATCCTGAGAAGTTTAAAGAGTTGGCACAAGCGTATGAGGT
TCTGAGTGACCCAGAGAAGCGTGAAATATATGATCAATACGGCGAGGATG
CGCTTAAAGAGGGAATGGGTGGTGGTGGTGGTGCCCATGACCCATTCGAC
ATATTCCAATCCTTCTTCGGTGGCAGCCCATTTGGTGGTGGGAGCAGCAG
AGGAAGAAGGCAAAGGAGGGGAGAGGACGTAATCCATCCCCTCAAGGTTT
CGTTGGAGGATCTGTACAATGGGACATCTAAGAAGCTCTCGCTCTCCCGC
AATGTAATCTGCACCAAGTGCAAAGGGAAGGGGTCTAAGTCAGGTGCATC
AATGAAATGTTCTGGCTGCCAGGGATCTGGAATGAAAGTTTCAATAAGAC
ACCTTGGCCCCTCTATGATTCAACAAATGCAGCATCCTTGCAATGAGTGC
AAGGGTACTGGAGAAACAATCAATGACAAGGATCGCTGCCCACAATGTAA
GGGTGAGAAGGTCATTCAGGAGAAAAAAGTCTT
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