CN186865

Overview
NameCN186865
Unique NameCN186865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF6_ORYSJ (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 7.515e-59
Identity = 104/136 (76.47%), Postives = 128/136 (94.12%), Query Frame = -1
Query:  363 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 770
            AN+ASGMAV D+CKLKF ELK+KR++RFI FKI+E+ +QVVV++LG+P D+Y++FTAS+PA ECRYAV+DFDFVTDENCQKSKI FI+WSPDTSKVRSKM+YASSKDRFKRELDGIQVELQATDP+EM +D++++R
Sbjct:    2 ANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMPASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKAR 137          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF3_ARATH (Actin-depolymerizing factor 3 OS=Arabidopsis thaliana GN=ADF3 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.085e-57
Identity = 105/138 (76.09%), Postives = 123/138 (89.13%), Query Frame = -1
Query:  357 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 770
            ANAASGMAV DDCKLKF+ELK KRT+RFI++KIEE QKQV+VEK+GEP  ++E+  ASLPADECRYA++DFDFV+ E   +S+I F+AWSPDT++VRSKMIYASSKDRFKRELDGIQVELQATDPTEM LDV +SR N
Sbjct:    2 ANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLPADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFKSRAN 139          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF7_ARATH (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.417e-57
Identity = 105/136 (77.21%), Postives = 126/136 (92.65%), Query Frame = -1
Query:  363 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 770
            ANAASGMAV+D+CKLKFLELK+KR YRFI+F+I+ +Q  VVVEKLG P ++Y++FTASLPA+ECRYAV+DFDF+TDENCQKSKI FIAWSPD+S+VR KM+YASSKDRFKRELDGIQVELQATDP+EM  D+++SR
Sbjct:    2 ANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQ--VVVEKLGNPDETYDDFTASLPANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSR 135          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF12_ARATH (Actin-depolymerizing factor 12 OS=Arabidopsis thaliana GN=ADF12 PE=2 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 1.916e-54
Identity = 103/136 (75.74%), Postives = 121/136 (88.97%), Query Frame = -1
Query:  363 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 770
            ANAASGMAV+D+CKLKFLELKAKR YRFI+F+I+ +Q  VVVEKLG P ++Y++FT  LP +ECRYAVYDFDF T EN QKSKI FIAWSPD+S+VR KM+YASSKDRFKRELDGIQVELQATDP+EM LD+++SR
Sbjct:    2 ANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQ--VVVEKLGSPQENYDDFTNYLPPNECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSLDIIKSR 135          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF9_ORYSJ (Actin-depolymerizing factor 9 OS=Oryza sativa subsp. japonica GN=ADF9 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.622e-53
Identity = 94/138 (68.12%), Postives = 121/138 (87.68%), Query Frame = -1
Query:  357 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 770
            AN+ASG+AV+D+CK KF ELK +R +RFIVFKI++K  ++ VE+LG+ ++ YE+F A+LPADECRYAVYD DFVTDENCQKSKI F +WSPDT++ RSKM+YASSKDRF+RELDGIQ E+QATDP+EM LD++R+R +
Sbjct:    2 ANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLPADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIIRARAH 139          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF2_MAIZE (Actin-depolymerizing factor 2 OS=Zea mays GN=ADF2 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.718e-53
Identity = 92/138 (66.67%), Postives = 121/138 (87.68%), Query Frame = -1
Query:  357 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 770
            AN++SG+AV D+CK+KF +LKA+R++RFIVF+I++K  ++ V++LGEP+  Y +FT SLPADECRYA+YD DF T ENCQKSKI F +WSPDT++ RSKM+YASSKDRF+RELDGIQ E+QATDP+EM LD+++SRTN
Sbjct:    2 ANSSSGLAVSDECKVKFRDLKARRSFRFIVFRIDDKDMEIKVDRLGEPNQGYGDFTDSLPADECRYAIYDLDFTTVENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVKSRTN 139          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF1_MAIZE (Actin-depolymerizing factor 1 OS=Zea mays GN=ADF1 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.051e-52
Identity = 92/138 (66.67%), Postives = 121/138 (87.68%), Query Frame = -1
Query:  357 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 770
            AN++SG+AV+D+CK+KF ELK++RT+RFIVF+I++   ++ V++LGEP+  Y +FT SLPA+ECRYA+YD DF T ENCQKSKI F +WSPDT++ RSKM+YASSKDRF+RELDGIQ E+QATDP+EM LD++RSRTN
Sbjct:    2 ANSSSGLAVNDECKVKFRELKSRRTFRFIVFRIDDTDMEIKVDRLGEPNQGYGDFTDSLPANECRYAIYDLDFTTIENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVRSRTN 139          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF_BRANA (Actin-depolymerizing factor (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.863e-50
Identity = 95/127 (74.80%), Postives = 115/127 (90.55%), Query Frame = -1
Query:  363 DDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 743
            +D+CKLKFLELK KR +RFI+F+I+ +Q  VVVEKLG P ++Y++FTASLPADECRYAV+DFDF T+ENCQKSKI FIAWSPD+S+VR KM+YASSKDRFKRELDGIQVELQATDP+EM  D+++SR
Sbjct:    1 EDNCKLKFLELK-KRIFRFIIFRIDGQQ--VVVEKLGNPQETYDDFTASLPADECRYAVFDFDFTTNENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSR 124          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF_VITVI (Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.088e-49
Identity = 88/137 (64.23%), Postives = 117/137 (85.40%), Query Frame = -1
Query:  357 NAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 767
            NA+SGM V D  K  FLELK K+ +R+++FKI+EK+K+VVVEK G P++S++ F A+LP ++CRYAVYDFDFVT ENCQKSKI FIAWSPD+S++R+KM+YA+SK+RF+RELDG+  E+QATDPTEM L+V+R R +
Sbjct:    7 NASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQATDPTEMDLEVLRERAH 143          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF6_ARATH (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana GN=ADF6 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.962e-47
Identity = 86/137 (62.77%), Postives = 112/137 (81.75%), Query Frame = -1
Query:  357 NAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 767
            NA SGM V D+ K  FLEL+ K+T+R++VFKI+E +K+VVVEK G P++SY++F ASLP ++CRYAVYDFDFVT ENCQKSKI F AWSP TS +R+K++Y++SKD+  REL GI  E+QATDPTE+ L+V+R R N
Sbjct:   10 NAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLRERAN 146          
The following BLAST results are available for this feature:
BLAST of CN186865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ADF6_ORYSJ7.515e-5976.47Actin-depolymerizing factor 6 OS=Oryza sativa subs... [more]
ADF3_ARATH1.085e-5776.09Actin-depolymerizing factor 3 OS=Arabidopsis thali... [more]
ADF7_ARATH1.417e-5777.21Actin-depolymerizing factor 7 OS=Arabidopsis thali... [more]
ADF12_ARATH1.916e-5475.74Actin-depolymerizing factor 12 OS=Arabidopsis thal... [more]
ADF9_ORYSJ1.622e-5368.12Actin-depolymerizing factor 9 OS=Oryza sativa subs... [more]
ADF2_MAIZE4.718e-5366.67Actin-depolymerizing factor 2 OS=Zea mays GN=ADF2 ... [more]
ADF1_MAIZE1.051e-5266.67Actin-depolymerizing factor 1 OS=Zea mays GN=ADF1 ... [more]
ADF_BRANA2.863e-5074.80Actin-depolymerizing factor (Fragment) OS=Brassica... [more]
ADF_VITVI1.088e-4964.23Actin-depolymerizing factor OS=Vitis vinifera PE=2... [more]
ADF6_ARATH2.962e-4762.77Actin-depolymerizing factor 6 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003I22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003I22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186865 ID=CN186865; Name=CN186865; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTTTTTTTATTTTTTTTTTTAAGAAATTGCATCCATAACAATTCA
TGTAACTGATGTATTACACTGATACTACTGCAAATAACCCAGTTGCAAGC
AATCAAAGCTAAAATGAGATATGTACCCCCCACAAACCATTATATATTAG
TCTGTAATTATCATCACACCATATGGGGATACTCACCCTATTAATCCACA
GATATAACAAATGAGAAGACAACTTAAAAAAGTATTTAACTCCGACCACA
AGCTGATAGCAAAGCAAGTTATAAGTCATAAAAGATATAGACATTACATT
TAAGTGAACAATATAGTATGGGCTTTCCATTGCACCATAGGCAAGTCTAA
AATTTAATTTGTGCGGCTTCTCATGACATCAAGACCCATCTCAGTAGGAT
CAGTAGCCTGCAACTCTACCTGAATTCCATCCAATTCTCTCTTGAACCTG
TCCTTGGAGCTAGCATAAATCATCTTGCTTCTCACCTTTGAGGTGTCGGG
GGACCATGCAATGAAAATAATCTTGCTCTTCTGGCAGTTCTCATCAGTCA
CAAAGTCAAAATCGTAGACAGCGTATCGGCACTCATCCGCTGGGAGGCTA
GCAGTGAAATTCTCATAACTATCAGATGGTTCACCAAGCTTCTCCACAAC
AACCTGCTTCTGCTTCTCTTCAATCTTGAAAACTATGAAGCGGTAAGTCC
TTTTTGCCTTCAATTCCAAAAACTTCAGCTTGCAGTCATCGTCGACTGCC
ATTCCAGATGCTGCATTTGC
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