CN186865

Overview
NameCN186865
Unique NameCN186865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF2_ORYSJ (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica GN=ADF2 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.619e-47
Identity = 86/138 (62.32%), Postives = 114/138 (82.61%), Query Frame = -1
Query:  357 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 770
            +NA+SGM V  D +  FLEL+ K+ +R+++FKIEEKQKQVVVEK G  ++SY++F ASLP ++CRYA+YDFDFVT EN QKSKI FIAWSP TS++R+KM+Y++SKDR K+ELDG   E+QATDPTE+ L+V+R R +
Sbjct:    8 SNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTEVDLEVLRERAH 145          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF11_ORYSJ (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica GN=ADF11 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.296e-46
Identity = 78/138 (56.52%), Postives = 116/138 (84.06%), Query Frame = -1
Query:  357 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 770
            ANA+SG+ V  +CK  FLEL+ K+++R+++FKI++K K+VVVEK G  ++S+++F  SLP  +CRYA+YDFDFVT+ENCQKSKI F+AWSP  S++R+KM+YA+SK+RF+RELDG+  E+QATDP+E+ ++++R R +
Sbjct:    8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLRERAH 145          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF4_ORYSJ (Actin-depolymerizing factor 4 OS=Oryza sativa subsp. japonica GN=ADF4 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.165e-43
Identity = 78/136 (57.35%), Postives = 113/136 (83.09%), Query Frame = -1
Query:  363 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 770
            AN++SG+A+ DDCKLKF EL++KR +RFI F ++ K K+++V+K+G+ + SYE+FT+SLP  +CR+A+YDFDF+T E+  KS+I +I WSPD +KVRSKM+YASS +RFK+EL+GIQ+E+QATD  E+ LD ++ R
Sbjct:    2 ANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALKDR 137          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF5_ARATH (Actin-depolymerizing factor 5 OS=Arabidopsis thaliana GN=ADF5 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.682e-42
Identity = 77/134 (57.46%), Postives = 106/134 (79.10%), Query Frame = -1
Query:  363 AASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 764
            A +GM V D+C   F+++K K+ +R+IVFKIEEK ++V V+K+G   +SY +   SLP D+CRYAV+DFDFVT +NC+KSKI FIAWSP+ SK+R+K++YA+SKD  +R L+GI  ELQATDPTEMG D+++ R
Sbjct:    8 ATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPTEMGFDIIQDR 141          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF3_MAIZE (Actin-depolymerizing factor 3 OS=Zea mays GN=ADF3 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.869e-42
Identity = 79/136 (58.09%), Postives = 113/136 (83.09%), Query Frame = -1
Query:  363 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 770
            ANA SG+AV+D+C LKF EL++KR +RFI FK+++K K++VV+++G+ + SY++FT SLP ++CRYA+YDFDFVT E+ QKS+I +I WSP ++KV+SKM+YASS  +FK  L+GIQVELQATD +E+ LD ++ R
Sbjct:    2 ANARSGVAVNDECMLKFGELQSKRLHRFITFKMDDKFKEIVVDQVGDRATSYDDFTNSLPENDCRYAIYDFDFVTAEDVQKSRIFYILWSPSSAKVKSKMLYASSNQKFKSGLNGIQVELQATDASEISLDEIKDR 137          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF10_ORYSJ (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica GN=ADF10 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.424e-41
Identity = 72/130 (55.38%), Postives = 106/130 (81.54%), Query Frame = -1
Query:  357 VDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 746
            V +  K  F ELK ++ +R+++FKI+++++++VVEK G P +SY++FTASLPAD+CRYAVYD DFV+D+NC+KSKI FI+WSP  S++R+K IYA S+++F+ ELDG+  E+QATDP +M L+V+R R N
Sbjct:   20 VPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLPADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 149          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF5_ORYSJ (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica GN=ADF5 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.205e-40
Identity = 73/134 (54.48%), Postives = 104/134 (77.61%), Query Frame = -1
Query:  363 AASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 764
            A  GM V ++C+  F+E+K K+ +RF+V+KI+E+ + V+V+K+G P + YE   A+LP D+CRYAV+DFDFVT +NCQKSKI FIAWSP  S++R+K++YA+SK   +R LDG+  E+QATD +EMG DV+R R
Sbjct:    8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQATDSSEMGYDVIRGR 141          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF9_ARATH (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana GN=ADF9 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.020e-39
Identity = 70/126 (55.56%), Postives = 99/126 (78.57%), Query Frame = -1
Query:  363 DDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 740
            DDCK  F+E+K K+ +R++V+K+EEK ++V V+K+G   +SY++  ASLP D+CRYAV+DFD+VT +NC+ SKI FI WSP+ S++R KM+YA+SK   +R LDG+  ELQATDPTEMG D ++ R
Sbjct:    3 DDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQDR 128          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF3_ORYSJ (Actin-depolymerizing factor 3 OS=Oryza sativa subsp. japonica GN=ADF3 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.128e-38
Identity = 75/149 (50.34%), Postives = 106/149 (71.14%), Query Frame = -1
Query:  357 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDE-----------NCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 770
            ANA SG+AV ++CK +F EL+A R +RF+VFKI++  +QVVV+++G     ++  TASLPAD CRYAVYD DF   +              +SKI F++WSP  + VRSKM+YASS + FK+ELDG+Q++LQATDP+E+ LDV++  T+
Sbjct:    2 ANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVLKDHTS 150          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF11_ARATH (Putative actin-depolymerizing factor 11 OS=Arabidopsis thaliana GN=ADF11 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.779e-37
Identity = 83/138 (60.14%), Postives = 98/138 (71.01%), Query Frame = -1
Query:  357 MAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKL------GEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 752
            M + DDCKL FLELK +RT+R IV+KIE+   QV+VEK       GE   SYE F  SLPADECRYA+ D +FV  E     KI FIAWSP T+K+R KMIY+S+KDRFKRELDGIQVE  ATD T++ LD +R R N
Sbjct:    1 MVLHDDCKLTFLELKERRTFRSIVYKIEDNM-QVIVEKHHYKKMHGEREQSYEEFANSLPADECRYAILDIEFVPGER----KICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEFHATDLTDISLDAIRRRIN 133          
The following BLAST results are available for this feature:
BLAST of CN186865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ADF2_ORYSJ8.619e-4762.32Actin-depolymerizing factor 2 OS=Oryza sativa subs... [more]
ADF11_ORYSJ7.296e-4656.52Actin-depolymerizing factor 11 OS=Oryza sativa sub... [more]
ADF4_ORYSJ1.165e-4357.35Actin-depolymerizing factor 4 OS=Oryza sativa subs... [more]
ADF5_ARATH1.682e-4257.46Actin-depolymerizing factor 5 OS=Arabidopsis thali... [more]
ADF3_MAIZE2.869e-4258.09Actin-depolymerizing factor 3 OS=Zea mays GN=ADF3 ... [more]
ADF10_ORYSJ1.424e-4155.38Actin-depolymerizing factor 10 OS=Oryza sativa sub... [more]
ADF5_ORYSJ1.205e-4054.48Actin-depolymerizing factor 5 OS=Oryza sativa subs... [more]
ADF9_ARATH1.020e-3955.56Actin-depolymerizing factor 9 OS=Arabidopsis thali... [more]
ADF3_ORYSJ1.128e-3850.34Actin-depolymerizing factor 3 OS=Oryza sativa subs... [more]
ADF11_ARATH2.779e-3760.14Putative actin-depolymerizing factor 11 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003I22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003I22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186865 ID=CN186865; Name=CN186865; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTTTTTTTATTTTTTTTTTTAAGAAATTGCATCCATAACAATTCA
TGTAACTGATGTATTACACTGATACTACTGCAAATAACCCAGTTGCAAGC
AATCAAAGCTAAAATGAGATATGTACCCCCCACAAACCATTATATATTAG
TCTGTAATTATCATCACACCATATGGGGATACTCACCCTATTAATCCACA
GATATAACAAATGAGAAGACAACTTAAAAAAGTATTTAACTCCGACCACA
AGCTGATAGCAAAGCAAGTTATAAGTCATAAAAGATATAGACATTACATT
TAAGTGAACAATATAGTATGGGCTTTCCATTGCACCATAGGCAAGTCTAA
AATTTAATTTGTGCGGCTTCTCATGACATCAAGACCCATCTCAGTAGGAT
CAGTAGCCTGCAACTCTACCTGAATTCCATCCAATTCTCTCTTGAACCTG
TCCTTGGAGCTAGCATAAATCATCTTGCTTCTCACCTTTGAGGTGTCGGG
GGACCATGCAATGAAAATAATCTTGCTCTTCTGGCAGTTCTCATCAGTCA
CAAAGTCAAAATCGTAGACAGCGTATCGGCACTCATCCGCTGGGAGGCTA
GCAGTGAAATTCTCATAACTATCAGATGGTTCACCAAGCTTCTCCACAAC
AACCTGCTTCTGCTTCTCTTCAATCTTGAAAACTATGAAGCGGTAAGTCC
TTTTTGCCTTCAATTCCAAAAACTTCAGCTTGCAGTCATCGTCGACTGCC
ATTCCAGATGCTGCATTTGC
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