FC921759

Overview
NameFC921759
Unique NameFC921759
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length269
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10524 contig Csv1_Contig10524:565..833. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_PELPD (Ferrochelatase OS=Pelobacter propionicus (strain DSM 2379) GN=hemH PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.515e-19
Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = 1
Query:   22 AGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            +GDPY DQ+   + L+M+R    GIN  H LA+QSR GPV+WL+P T++ + EL  +GVK LL +PVSFVS+HIETL EIDM
Sbjct:  202 SGDPYLDQIRATVALVMERFG--GIN--HHLAFQSRAGPVKWLEPSTEKKIRELAGQGVKKLLMVPVSFVSDHIETLHEIDM 279          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_GEOSL (Ferrochelatase OS=Geobacter sulfurreducens GN=hemH PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.309e-18
Identity = 45/87 (51.72%), Postives = 64/87 (73.56%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            S++++ GDPY D + E + L+M+R +  G+   H LA+QSR GPV+WL+P TDE+L  L    VK+LL +P+SFVS+HIETL EID+
Sbjct:  197 SFIDE-GDPYLDHIRETVRLVMERFE--GVT--HHLAFQSRAGPVKWLEPSTDEMLEHLAAHQVKNLLIVPLSFVSDHIETLHEIDI 278          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_SULSY (Ferrochelatase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=hemH PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.034e-17
Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = 1
Query:   25 GDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEID 264
            GDPY+ Q E  + LIM+       N  ++LAYQS+VGPV+WL+P+TD+ +  L ++G K L+ IPVSFVSEH ETL E+D
Sbjct:  221 GDPYKKQTETTVKLIMEHFP----NVKYSLAYQSKVGPVKWLEPFTDQEIERLIKEGYKKLIVIPVSFVSEHSETLYELD 296          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_GEOMG (Ferrochelatase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=hemH PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.567e-16
Identity = 43/87 (49.43%), Postives = 64/87 (73.56%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            S++++ GDPY   +EE + L+M+R +  G+   + LA+QSR GPV+WL+P T+E+L  L    VK+LL +P+SFVS+HIETL EID+
Sbjct:  197 SFIDE-GDPYLSHIEETVRLVMERFE--GVT--YHLAFQSRAGPVKWLEPSTEEILEYLAAHQVKNLLMVPLSFVSDHIETLHEIDI 278          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_GEOUR (Ferrochelatase OS=Geobacter uraniireducens (strain Rf4) GN=hemH PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.047e-16
Identity = 42/87 (48.28%), Postives = 64/87 (73.56%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            S++++ GDPY   + E + L+M+RL     N ++ LA+QSR GPV+WL+P T+E++ +L + G K LL +P+SFVS+HIETL EID+
Sbjct:  197 SFIDE-GDPYLSHILETVRLVMERLG----NVNYHLAFQSRAGPVKWLEPSTEEMIQKLAKGGCKELLMVPLSFVSDHIETLYEIDI 278          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_GEOSF (Ferrochelatase OS=Geobacter sp. (strain FRC-32) GN=hemH PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.491e-16
Identity = 39/81 (48.15%), Postives = 58/81 (71.60%), Query Frame = 1
Query:   25 GDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            GDPY   ++  + L+M+RL     N D+ LA+QSR GPV+WL+P T+E++  L  +G K +L +P+SFVS+HIETL E+D+
Sbjct:  202 GDPYLSHIQATVRLVMERLG----NIDYHLAFQSRAGPVKWLEPSTEEMMKRLATEGRKEMLMVPLSFVSDHIETLYEVDI 278          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_AQUAE (Ferrochelatase OS=Aquifex aeolicus GN=hemH PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.491e-16
Identity = 43/80 (53.75%), Postives = 58/80 (72.50%), Query Frame = 1
Query:   25 GDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEID 264
            GDPY++Q E+ + LIM+   +     ++TLAYQS+VG  +WL+P TDEV+  L +K VK LL IP+SFVSEH ETL E+D
Sbjct:  195 GDPYQEQTEKTVKLIMENFPEV----EYTLAYQSKVGFGKWLEPSTDEVIRNLIKKEVKKLLVIPISFVSEHSETLYELD 270          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_RICCN (Ferrochelatase OS=Rickettsia conorii GN=hemH PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 7.777e-16
Identity = 39/83 (46.99%), Postives = 60/83 (72.29%), Query Frame = 1
Query:   19 KAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            KAGDPY  Q++E +  I++ L  + +  D+ + YQSRVGP++WLKP T++  +EL  K  K ++ +P+SFVSEH+ETL E+D+
Sbjct:  196 KAGDPYSFQIKETVQAIVKELNIKDL--DYKITYQSRVGPIEWLKPNTEDE-IELAGKLKKDIIIVPISFVSEHVETLVELDI 275          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_DESPS (Ferrochelatase OS=Desulfotalea psychrophila GN=hemH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.777e-16
Identity = 41/87 (47.13%), Postives = 62/87 (71.26%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            S++E AGDPY +  ++ I  I +    RG      L +QS+ GPV+WL+P T +VL++L Q+GVK++L +P+SFVS+H+ETL EID+
Sbjct:  199 SFIE-AGDPYVEHTKQSIGAIEEITGKRG-----RLCFQSKSGPVEWLEPSTPDVLIQLAQEGVKNILMVPISFVSDHVETLYEIDI 279          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_RICFE (Ferrochelatase OS=Rickettsia felis GN=hemH PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.016e-15
Identity = 39/83 (46.99%), Postives = 60/83 (72.29%), Query Frame = 1
Query:   19 KAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            KAGDPY  Q++E +  I++ L  + +  D+ + YQSRVGP++WLKP T++  +EL  K  K ++ +P+SFVSEH+ETL E+D+
Sbjct:  198 KAGDPYSFQIKETVKAIVKELNIKDL--DYKITYQSRVGPIEWLKPNTEDE-IELAGKLKKDIIIVPISFVSEHVETLVELDI 277          
The following BLAST results are available for this feature:
BLAST of FC921759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
HEMH_PELPD7.515e-1957.32Ferrochelatase OS=Pelobacter propionicus (strain D... [more]
HEMH_GEOSL8.309e-1851.72Ferrochelatase OS=Geobacter sulfurreducens GN=hemH... [more]
HEMH_SULSY7.034e-1752.50Ferrochelatase OS=Sulfurihydrogenibium sp. (strain... [more]
HEMH_GEOMG1.567e-1649.43Ferrochelatase OS=Geobacter metallireducens (strai... [more]
HEMH_GEOUR2.047e-1648.28Ferrochelatase OS=Geobacter uraniireducens (strain... [more]
HEMH_GEOSF3.491e-1648.15Ferrochelatase OS=Geobacter sp. (strain FRC-32) GN... [more]
HEMH_AQUAE3.491e-1653.75Ferrochelatase OS=Aquifex aeolicus GN=hemH PE=3 SV... [more]
HEMH_RICCN7.777e-1646.99Ferrochelatase OS=Rickettsia conorii GN=hemH PE=3 ... [more]
HEMH_DESPS7.777e-1647.13Ferrochelatase OS=Desulfotalea psychrophila GN=hem... [more]
HEMH_RICFE1.016e-1546.99Ferrochelatase OS=Rickettsia felis GN=hemH PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionC06052A06T7 RindPdigS Citrus sinensis cDNA clone C06052A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921759 ID=FC921759; Name=FC921759; organism=Citrus sinensis; type=EST; length=269bp
CTTGTCAGTTATGTTGAGAAAGCTGGTGATCCATACAGAGATCAGATGGA
GGAGTGTATCTACCTAATCATGCAGAGGTTGAAAGATAGAGGAATCAACA
ATGATCATACTTTGGCATACCAGAGTCGAGTTGGGCCTGTACAATGGCTG
AAGCCTTACACTGATGAAGTTCTTGTGGAGCTTGGCCAGAAAGGTGTCAA
GAGTCTTCTAGCCATTCCAGTCAGTTTTGTGAGCGAGCACATTGAAACTC
TTGAAGAGATTGACATGGA
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