FC921759

Overview
NameFC921759
Unique NameFC921759
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length269
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10524 contig Csv1_Contig10524:565..833. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_RICPR (Ferrochelatase OS=Rickettsia prowazekii GN=hemH PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.327e-15
Identity = 39/83 (46.99%), Postives = 60/83 (72.29%), Query Frame = 1
Query:   19 KAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            KAGDPY  Q++E +  I++ L  + +  D+ + YQSRVGP++WLKP T++  +EL  K  K ++ +P+SFVSEH+ETL E+D+
Sbjct:  196 KAGDPYSFQIKETVNKIVKELNIKDL--DYKITYQSRVGPIEWLKPNTEDE-IELAGKLKKDIIIVPISFVSEHVETLVELDI 275          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_RICCK (Ferrochelatase OS=Rickettsia canadensis (strain McKiel) GN=hemH PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.327e-15
Identity = 39/83 (46.99%), Postives = 60/83 (72.29%), Query Frame = 1
Query:   19 KAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            KAGDPY  Q++E +  I++ L  + +  D+ + YQSRVGP++WLKP T++  +EL  K  K ++ +P+SFVSEH+ETL E+D+
Sbjct:  201 KAGDPYSFQIKETVKAIVKELNIKDL--DYKITYQSRVGPIEWLKPNTEDE-IELAGKLKKDVIIVPISFVSEHVETLVELDI 280          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_RICTY (Ferrochelatase OS=Rickettsia typhi GN=hemH PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.732e-15
Identity = 40/83 (48.19%), Postives = 59/83 (71.08%), Query Frame = 1
Query:   19 KAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            KAGDPY  Q++E +  I++ L  + +  D+ + YQSRVGP++WLKP T E  +EL  K  K ++ +P+SFVSEH+ETL E+D+
Sbjct:  196 KAGDPYSFQIKETVNKIVKELNIKDL--DYKITYQSRVGPIEWLKPST-EYEIELAGKLKKDIIIVPISFVSEHVETLVELDI 275          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_RICBR (Ferrochelatase OS=Rickettsia bellii (strain RML369-C) GN=hemH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.860e-15
Identity = 37/82 (45.12%), Postives = 60/82 (73.17%), Query Frame = 1
Query:   22 AGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            AGDPY  Q+EE +  +++ L  + +  D+ + YQSRVGPV+WLKP T++  +E+  K  K+++ +P++FVSEH+ETL E+D+
Sbjct:  200 AGDPYSFQVEETVKAVVKELNIKDL--DYKVTYQSRVGPVEWLKPNTEDE-IEIAGKQNKNIIIVPIAFVSEHVETLVELDI 278          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_RICB8 (Ferrochelatase OS=Rickettsia bellii (strain OSU 85-389) GN=hemH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.860e-15
Identity = 37/82 (45.12%), Postives = 60/82 (73.17%), Query Frame = 1
Query:   22 AGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            AGDPY  Q+EE +  +++ L  + +  D+ + YQSRVGPV+WLKP T++  +E+  K  K+++ +P++FVSEH+ETL E+D+
Sbjct:  200 AGDPYSFQVEETVKAVVKELNIKDL--DYKVTYQSRVGPVEWLKPNTEDE-IEIAGKQNKNIIIVPIAFVSEHVETLVELDI 278          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_GEOSM (Ferrochelatase OS=Geobacter sp. (strain M21) GN=hemH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.860e-15
Identity = 37/87 (42.53%), Postives = 62/87 (71.26%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            S++E+ GDPY D ++E + L+M+++ +      HTL +QS+   V+WL+P T+  + ++ + G K+LL +P+SFVS+HIETL EID+
Sbjct:  197 SFIEE-GDPYLDHIQETVRLVMEQVGE----GSHTLCFQSKASRVKWLEPSTEATIEQMAKAGKKNLLMVPLSFVSDHIETLYEIDI 278          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_GEOBB (Ferrochelatase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=hemH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.860e-15
Identity = 37/87 (42.53%), Postives = 62/87 (71.26%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            S++E+ GDPY D ++E + L+M+++ +      HTL +QS+   V+WL+P T+  + ++ + G K+LL +P+SFVS+HIETL EID+
Sbjct:  197 SFIEE-GDPYLDHIQETVRLVMEQVGE----GSHTLCFQSKASRVKWLEPSTEATIEQMAKAGKKNLLMVPLSFVSDHIETLYEIDI 278          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_XENLA (Ferrochelatase, mitochondrial OS=Xenopus laevis GN=fech PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.583e-15
Identity = 37/85 (43.53%), Postives = 57/85 (67.06%), Query Frame = 1
Query:   13 VEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            V   GDPY  ++   +  +M+RL   G +N + L +QS+VGP+ WL P TDE +  L Q+G K++L +P++F S+HIETL E+D+
Sbjct:  256 VVNRGDPYPQEVGATVQKVMERL---GFSNPYRLVWQSKVGPMAWLGPQTDESIKGLCQRGKKNILLVPIAFTSDHIETLYELDI 337          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_MOUSE (Ferrochelatase, mitochondrial OS=Mus musculus GN=Fech PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.467e-14
Identity = 36/85 (42.35%), Postives = 57/85 (67.06%), Query Frame = 1
Query:   13 VEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            V   GDPY  ++   ++ +M++L   G  N + L +QS+VGPV WL P TDE +  L ++G K++L +P++F S+HIETL E+D+
Sbjct:  266 VVNRGDPYPQEVGATVHKVMEKL---GYPNPYRLVWQSKVGPVPWLGPQTDEAIKGLCERGRKNILLVPIAFTSDHIETLYELDI 347          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_WOLTR (Ferrochelatase OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=hemH PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.267e-14
Identity = 40/85 (47.06%), Postives = 59/85 (69.41%), Query Frame = 1
Query:   13 VEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            V K GDPY  Q+EE + LI+++L  + +  D ++ YQS++GPV+WL+P T+  L+     GV  +L +P+SFVSEH ETL E+DM
Sbjct:  224 VIKKGDPYALQVEETVKLIVKKLHIKDL--DWSICYQSKIGPVKWLEPSTESELLRAKADGVPVVL-LPISFVSEHSETLVELDM 305          
The following BLAST results are available for this feature:
BLAST of FC921759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
HEMH_RICPR1.327e-1546.99Ferrochelatase OS=Rickettsia prowazekii GN=hemH PE... [more]
HEMH_RICCK1.327e-1546.99Ferrochelatase OS=Rickettsia canadensis (strain Mc... [more]
HEMH_RICTY1.732e-1548.19Ferrochelatase OS=Rickettsia typhi GN=hemH PE=3 SV... [more]
HEMH_RICBR3.860e-1545.12Ferrochelatase OS=Rickettsia bellii (strain RML369... [more]
HEMH_RICB83.860e-1545.12Ferrochelatase OS=Rickettsia bellii (strain OSU 85... [more]
HEMH_GEOSM3.860e-1542.53Ferrochelatase OS=Geobacter sp. (strain M21) GN=he... [more]
HEMH_GEOBB3.860e-1542.53Ferrochelatase OS=Geobacter bemidjiensis (strain B... [more]
HEMH_XENLA6.583e-1543.53Ferrochelatase, mitochondrial OS=Xenopus laevis GN... [more]
HEMH_MOUSE1.467e-1442.35Ferrochelatase, mitochondrial OS=Mus musculus GN=F... [more]
HEMH_WOLTR4.267e-1447.06Ferrochelatase OS=Wolbachia sp. subsp. Brugia mala... [more]

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Properties
Property NameValue
Genbank descriptionC06052A06T7 RindPdigS Citrus sinensis cDNA clone C06052A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921759 ID=FC921759; Name=FC921759; organism=Citrus sinensis; type=EST; length=269bp
CTTGTCAGTTATGTTGAGAAAGCTGGTGATCCATACAGAGATCAGATGGA
GGAGTGTATCTACCTAATCATGCAGAGGTTGAAAGATAGAGGAATCAACA
ATGATCATACTTTGGCATACCAGAGTCGAGTTGGGCCTGTACAATGGCTG
AAGCCTTACACTGATGAAGTTCTTGTGGAGCTTGGCCAGAAAGGTGTCAA
GAGTCTTCTAGCCATTCCAGTCAGTTTTGTGAGCGAGCACATTGAAACTC
TTGAAGAGATTGACATGGA
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