FC921759

Overview
NameFC921759
Unique NameFC921759
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length269
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10524 contig Csv1_Contig10524:565..833. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_BRUA1 (Ferrochelatase OS=Brucella abortus (strain S19) GN=hemH PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.058e-12
Identity = 39/86 (45.35%), Postives = 55/86 (63.95%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA-YQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            SY +K GDPYR Q  E   L+ +RL   G+  D   A +QSR GP +WL+PYTDE + EL + GVK +  +   FV++ +ET++EI
Sbjct:  227 SYSDK-GDPYRQQCLETTRLLRERL---GLGEDEMRATFQSRFGPEEWLQPYTDETVKELAKNGVKLVAVLNPGFVADCLETVDEI 308          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_WOLPP (Ferrochelatase OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=hemH PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.216e-12
Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = 1
Query:   19 KAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            K GDPY  Q+E+ + LI+++L    +  D  + YQS+VGPV+WL+P T+  L       +  +L+ P+SFVSEH ETL E+D+
Sbjct:  198 KKGDPYASQIEKTVKLIVKKLNIEDL--DWGICYQSKVGPVKWLEPSTESELSRAKDDNIPVVLS-PISFVSEHSETLVELDI 277          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_PHEZH (Ferrochelatase OS=Phenylobacterium zucineum (strain HLK1) GN=hemH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.162e-11
Identity = 37/84 (44.05%), Postives = 52/84 (61.90%), Query Frame = 1
Query:   13 VEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEID 264
            V  AGDPY  Q++     +   L +     D  ++YQSRVGP++WL P TD+ +   G +G K LL  P++FVSEH+ETL E+D
Sbjct:  197 VVDAGDPYEAQVQASAAAVAALLPEF---TDWGISYQSRVGPLKWLGPATDDEVRRAGAEG-KGLLVSPIAFVSEHVETLVELD 276          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_OCHA4 (Ferrochelatase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=hemH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.162e-11
Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 1
Query:    7 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA-YQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            SY +K GDPYR Q  E   L+  RL   G+++    + +QSR GP +WL+PYTDE + EL + GVKS+  +   FV++ +ET++EI
Sbjct:  225 SYSDK-GDPYRQQCLETSRLLQARL---GLDDSQFRSTFQSRFGPEEWLQPYTDETVEELAKHGVKSMAVLNPGFVADCLETVDEI 306          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_YEAST (Ferrochelatase, mitochondrial OS=Saccharomyces cerevisiae GN=HEM15 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.518e-11
Identity = 38/85 (44.71%), Postives = 51/85 (60.00%), Query Frame = 1
Query:   13 VEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDM 267
            V   GD Y  ++   +Y IMQ+LK     N + L +QS+VGP  WL   T E+   LG K V  L+ IP++F S+HIETL EID+
Sbjct:  241 VVNTGDAYPAEVAATVYNIMQKLK---FKNPYRLVWQSQVGPKPWLGAQTAEIAEFLGPK-VDGLMFIPIAFTSDHIETLHEIDL 321          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_RHILW (Ferrochelatase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=hemH PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.589e-11
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1
Query:   19 KAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA-YQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            K GDPY  Q ++   L+ +RL   G+  ++ +  +QSR GP +WL+PYTD+ + +L Q GVK +  I   FVS+ +ETLEEI
Sbjct:  222 KQGDPYYCQCQKTGRLLRERL---GLTKENFMVTFQSRFGPEEWLQPYTDKTVEKLAQDGVKRIAVINPGFVSDCLETLEEI 300          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_RHIEC (Ferrochelatase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=hemH PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.589e-11
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1
Query:   19 KAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA-YQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            K GDPY  Q ++   L+ +RL   G+  ++ +  +QSR GP +WL+PYTD+ + +L Q GVK +  I   FVS+ +ETLEEI
Sbjct:  222 KQGDPYYCQCQKTGRLLRERL---GLTQENFMVTFQSRFGPEEWLQPYTDKTVEKLAQDGVKRIAVINPGFVSDCLETLEEI 300          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_LEPBI (Ferrochelatase OS=Leptospira biflexa GN=hemH PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.381e-11
Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 1
Query:   25 GDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            GD Y +++E  +  I   L   G N    ++YQS+VGP +W +P T +++  L ++G K +   P+SFVS+HIETLEEI
Sbjct:  222 GDRYMEEVELSVKGIADELSKFGFNGGVHISYQSKVGPAKWTEPSTIQMISSLAKQG-KHIAVYPISFVSDHIETLEEI 299          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_RHIL3 (Ferrochelatase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=hemH PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.416e-11
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1
Query:   19 KAGDPYRDQMEECIYLIMQRLKDRGINNDHTLA-YQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            K GDPY  Q ++   L+ +RL   G+  ++ L  +QSR GP +WL+PYTD+ + +L + GVK +  I   FVS+ +ETLEEI
Sbjct:  222 KQGDPYYCQCQKTGRLLRERL---GLTKENFLVTFQSRFGPEEWLQPYTDKTVEKLAKDGVKRIAVINPGFVSDCLETLEEI 300          
BLAST of FC921759 vs. ExPASy Swiss-Prot
Match: HEMH_LEPBP (Ferrochelatase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=hemH PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.767e-11
Identity = 32/79 (40.51%), Postives = 50/79 (63.29%), Query Frame = 1
Query:   25 GDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI 261
            GD Y +++E  +  I   L   G N    ++YQS+VGP +W +P T +++  L ++G K +   P+SFVS+H+ETLEEI
Sbjct:  222 GDRYMEEVELSVKGIADELSKFGFNGGVHISYQSKVGPAKWTEPSTIQMISSLAKQG-KHIAVYPISFVSDHLETLEEI 299          
The following BLAST results are available for this feature:
BLAST of FC921759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
HEMH_BRUA13.058e-1245.35Ferrochelatase OS=Brucella abortus (strain S19) GN... [more]
HEMH_WOLPP5.216e-1243.37Ferrochelatase OS=Wolbachia pipientis subsp. Culex... [more]
HEMH_PHEZH1.162e-1144.05Ferrochelatase OS=Phenylobacterium zucineum (strai... [more]
HEMH_OCHA41.162e-1144.19Ferrochelatase OS=Ochrobactrum anthropi (strain AT... [more]
HEMH_YEAST1.518e-1144.71Ferrochelatase, mitochondrial OS=Saccharomyces cer... [more]
HEMH_RHILW2.589e-1143.90Ferrochelatase OS=Rhizobium leguminosarum bv. trif... [more]
HEMH_RHIEC2.589e-1143.90Ferrochelatase OS=Rhizobium etli (strain CFN 42 / ... [more]
HEMH_LEPBI3.381e-1141.77Ferrochelatase OS=Leptospira biflexa GN=hemH PE=3 ... [more]
HEMH_RHIL34.416e-1143.90Ferrochelatase OS=Rhizobium leguminosarum bv. vici... [more]
HEMH_LEPBP5.767e-1140.51Ferrochelatase OS=Leptospira biflexa serovar Patoc... [more]

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Properties
Property NameValue
Genbank descriptionC06052A06T7 RindPdigS Citrus sinensis cDNA clone C06052A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921759 ID=FC921759; Name=FC921759; organism=Citrus sinensis; type=EST; length=269bp
CTTGTCAGTTATGTTGAGAAAGCTGGTGATCCATACAGAGATCAGATGGA
GGAGTGTATCTACCTAATCATGCAGAGGTTGAAAGATAGAGGAATCAACA
ATGATCATACTTTGGCATACCAGAGTCGAGTTGGGCCTGTACAATGGCTG
AAGCCTTACACTGATGAAGTTCTTGTGGAGCTTGGCCAGAAAGGTGTCAA
GAGTCTTCTAGCCATTCCAGTCAGTTTTGTGAGCGAGCACATTGAAACTC
TTGAAGAGATTGACATGGA
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