CK936630

Overview
NameCK936630
Unique NameCK936630
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 9.228e-59
Identity = 84/148 (56.76%), Postives = 96/148 (64.86%), Query Frame = 1
Query:  340 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIIN 771
            K +   F AQT HETTGGW  AP G +AWGYCF  E    SDYC P+  +PC    +YYGRGPIQLS NYNY               NPDL+ATD  + FK+AIWFWMTAQPPKPS H VI  +W PS  D  AGR+PG+G+ TNIIN
Sbjct:   77 KREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLA--NPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIIN 222          

HSP 2 Score: 77.0258 bits (188), Expect = 9.228e-59
Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 3
Query:  183 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 359
            +  I+SR  FD +L +RND  C A+GFYTYDAF+ AA AFPGFG +G+   +KRE+AAF
Sbjct:   25 VSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAF 83          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4)

HSP 1 Score: 170.629 bits (431), Expect = 2.661e-58
Identity = 84/148 (56.76%), Postives = 98/148 (66.22%), Query Frame = 1
Query:  340 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIIN 771
            K +   F AQT HETTGGW  AP G +AWGYCF  E    S+YC P+  +PC  GK YYGRGPIQLS NYNY               NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W PS  D  AGR+PG+G+ TNI+N
Sbjct:  129 KREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVN 274          

HSP 2 Score: 75.8702 bits (185), Expect = 2.661e-58
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 3
Query:  183 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 359
            +  I+SR +FD +L +RND  C A+GFYTYDAF+ AA AF GFG +G    RKRE+AAF
Sbjct:   77 VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAF 135          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 7.704e-58
Identity = 82/142 (57.75%), Postives = 94/142 (66.20%), Query Frame = 1
Query:  358 FFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIIN 771
            F AQT HETTGGW  AP G +AWGYCF  E    +DYC P+  +PC    +YYGRGPIQLS NYNY               NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W PS  D  AGR PG+G+ TNIIN
Sbjct:   83 FLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIIN 222          

HSP 2 Score: 75.485 bits (184), Expect = 7.704e-58
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 3
Query:  183 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 359
            +  IIS   FD +L +RND  C A+GFYTYDAF+ AA AFPGFG +G+   RKR++AAF
Sbjct:   25 VSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 83          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.002e-57
Identity = 81/150 (54.00%), Postives = 97/150 (64.67%), Query Frame = 1
Query:  340 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPP--SDYC--DPNYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIIN 771
            K +   F AQT HETTGGW  AP G Y+WGYCF  E +    SDYC     +PC    KYYGRGPIQ+S+NYNY              +NPDL+A+D  +SFK+A WFWMT Q PKPSCH V+  +W P+ ND  AGR+PGYG+ TNIIN
Sbjct:  131 KREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNY--GPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIIN 278          

HSP 2 Score: 77.7962 bits (190), Expect = 1.002e-57
Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 3
Query:  183 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 359
            +  I+SR +FD +L +RND  CPA+ FYTYDAF+ AA AFP F  +G+   RKRE+AAF
Sbjct:   79 VASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAF 137          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 6.418e-57
Identity = 83/149 (55.70%), Postives = 99/149 (66.44%), Query Frame = 1
Query:  340 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSD-YCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIIN 771
            K +   F AQT HETTGGWP AP G Y+WGYCF  E +  +  YC+P   +PC    KYYGRGPIQ+++NYNY              NNPDL+A+D  +SFK+A WFWMT Q PKPSCH VI  +W PSA+D  AGR+PGYG  TNIIN
Sbjct:  128 KREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNY--GPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIIN 274          

HSP 2 Score: 70.8626 bits (172), Expect = 6.418e-57
Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 3
Query:  183 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 359
            +  IIS  +FD +L +RND+ C A+GFYTYDAF+ AA A+P F  +G+    KRE+AAF
Sbjct:   76 VASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAF 134          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.001e-56
Identity = 77/138 (55.80%), Postives = 97/138 (70.29%), Query Frame = 1
Query:  358 FFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIIN 771
            FF QT HETTGGW  AP G +AWGYC ++E++P     DP       YYGRGPIQL+  YNY              NNPDL+++DPV++F++AIWFWMTAQ PKPSCH+VI ++W PS +D ++GRLPGYG+ TNIIN
Sbjct:   84 FFGQTSHETTGGWATAPDGPFAWGYCRVNEITPS----DP------PYYGRGPIQLTHKYNYQLAGDALGLDLV--NNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIIN 209          

HSP 2 Score: 71.2478 bits (173), Expect = 7.001e-56
Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 3
Query:  183 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 362
            +G II+R MF+ +L +R D+ C    FYTYDAFI+AA  FP FG +GN+  R+RE+AAFF
Sbjct:   27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFF 85          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.929e-55
Identity = 70/144 (48.61%), Postives = 85/144 (59.03%), Query Frame = 1
Query:  340 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIIN 771
            K++   FF QT HET GG      G +  GYCF+ ++               +YYGRGPIQL+   NY R            NNPDL+ATDP++SFK+AIWFWMT Q  KPSCH VII +W PS  D  A R+PGYG+ TNIIN
Sbjct:   79 KKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD-----------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIIN 207          

HSP 2 Score: 90.5077 bits (223), Expect = 9.929e-55
Identity = 37/59 (62.71%), Postives = 51/59 (86.44%), Query Frame = 3
Query:  186 GKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 362
            G I++RE+F+ +L +RN++ CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF
Sbjct:   28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFF 86          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 9.932e-55
Identity = 79/142 (55.63%), Postives = 93/142 (65.49%), Query Frame = 1
Query:  358 FFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYC--DPNYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIIN 771
            F AQT HETTGGW  AP G Y+WGYC+  E   P DYC     +PC    KY+GRGPIQ+S+NYNY              NNPDL+A D V+SFK+A+WFWMTAQ PKPS H+VI   W PS  D   GR+PG+G+ TNIIN
Sbjct:   63 FLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLL--NNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIIN 202          

HSP 2 Score: 66.6254 bits (161), Expect = 9.932e-55
Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 3
Query:  183 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 359
            +  +IS+ +F+ +L +RND  C A+GFYTY+AFI A + F  FG +G+   R +EIAAF
Sbjct:    5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAF 63          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.294e-54
Identity = 72/144 (50.00%), Postives = 88/144 (61.11%), Query Frame = 1
Query:  340 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIIN 771
            K++   FF QT HET GG      G +  GYCF+ ++    D  D       +YYGRGPIQL+   NY R            NNPDL+ATDP++SF++AIWFWMTAQ  KPSCH VII +W PS  D  A R+PGYG+ TNIIN
Sbjct:   79 KKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQI----DQSD-------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIIN 207          

HSP 2 Score: 90.5077 bits (223), Expect = 1.294e-54
Identity = 37/59 (62.71%), Postives = 51/59 (86.44%), Query Frame = 3
Query:  186 GKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 362
            G I++RE+F+ +L +RN++ CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF
Sbjct:   28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFF 86          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 1.682e-54
Identity = 80/150 (53.33%), Postives = 95/150 (63.33%), Query Frame = 1
Query:  340 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS--DYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIIN 771
            K +   F AQT HETTGGW  AP G YAWGYCF  E    +  DYC  +  +PC    KYYGRGPIQLS+N+NY               +PDL+A+D  +SF +A WFWMT Q PKPSCH V   +W PSA+D  AGR+PGYG+ TNIIN
Sbjct:  134 KREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNY--GPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIIN 281          

HSP 2 Score: 72.4034 bits (176), Expect = 1.682e-54
Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 3
Query:  183 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKREIAAF 359
            +  I+SR +FD +L +RND  CPA  FYTYDAF+ AA AFPGF  +G +    KRE+AAF
Sbjct:   81 VASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAF 140          
The following BLAST results are available for this feature:
BLAST of CK936630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHI2_HORVU9.228e-5956.7626 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=... [more]
CHI1_HORVU2.661e-5856.7626 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=... [more]
CHIC_SECCE7.704e-5857.75Basic endochitinase C OS=Secale cereale GN=rscc PE... [more]
CHI1_ORYSJ1.002e-5754.00Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI3_ORYSJ6.418e-5755.70Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI11_ORYSJ7.001e-5655.80Chitinase 11 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIA_SOLLC9.929e-5548.61Acidic 26 kDa endochitinase OS=Solanum lycopersicu... [more]
CHID_SOLLC9.932e-5555.63Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHIA_SOLCI1.294e-5450.00Acidic endochitinase pcht28 OS=Solanum chilense PE... [more]
CHI12_ORYSJ1.682e-5453.33Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004520_A04 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936630 ID=CK936630; Name=CK936630; organism=Citrus sinensis; type=EST; length=771bp
GGGGGAACACCAAGCAGAGGATAATTGATATCATAACTGNNNNTTTCAAA
ATGAGGCTTATTGGGTCCTTACTAATTTTCTCTCTAGTTTTATCTTTTGT
ACTAGGAGGCTCAGCACAGAACTGCGGAAGCGGCGTTGTGTACGGTGGAC
GTGATACCGGCCATGGGACGCATGGCGGTGAACTGGGCAAGATCATCTCA
AGGGAGATGTTTGATGACTTGCTTGAGTATAGAAATGATGAACGATGCCC
TGCCAGAGGCTTCTACACTTATGATGCTTTTATAGAGGCAGCCCAAGCTT
TTCCAGGCTTTGGTAACTCCGGAAATGAAACCATGCGTAAAAGAGAAATC
GCTGCCTTTTTTTGCCCAAACTGGCCATGAAACTACTGGGGGATGGCCCG
ATGCACCTGGTGGCGAATATGCTTGGGGATATTGCTTTATAAGCGAAGTT
AGCCCTCCGTCCGACTACTGTGATCCTAACTATCCATGTCGAGGGAAGTA
CTATGGCCGAGGTCCAATTCAACTCTCTTGGAATTACAATTACTTACGGT
GCGGAGAAGGCCTAGGGCTAGGAGAGGAGTTGTTGAACAATCCAGACCTT
CTTGCTACTGATCCAGTACTATCATTCAAGTCAGCAATCTGGTTCTGGAT
GACTGCACAGCCACCAAAGCCATCGTGCCACGAAGTCATTATCGACGAAT
GGAAACCATCAGCAAATGACGTAAACGCCGGCCGGCTTCCGGGATACGGT
CTAACCACAAATATAATCAAC
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