CK936630

Overview
NameCK936630
Unique NameCK936630
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 6.571e-47
Identity = 95/163 (58.28%), Postives = 109/163 (66.87%), Query Frame = 1
Query:  301 FQALVTPEMKPCVKEKSLPFFAQTGHETTGG--WPDAPGGEYAWGYCFISEVSPPSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIIN 771
            F A  T   +   K +   F AQT HETTGG  W  AP G YAWGYC+  E++PPS YC  DPNYPC  GK Y+GRGP+QLSWNYNY +C           NNPDLL++DP +SFKSA WFWMT Q PKPSCH VII  W PS++D  AGR  GYG+ TNIIN
Sbjct:   91 FPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLL--NNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIIN 250          

HSP 2 Score: 80.8777 bits (198), Expect = 8.699e-15
Identity = 37/59 (62.71%), Postives = 46/59 (77.97%), Query Frame = 3
Query:  183 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 359
            L  +ISRE F+ +L +RND  CPARGFYTYDAFI AA++FP F  +G++  RKREIAAF
Sbjct:   52 LTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAF 110          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.912e-46
Identity = 96/165 (58.18%), Postives = 110/165 (66.67%), Query Frame = 1
Query:  295 KLFQALVTPEMKPCVKEKSLPFFAQTGHETTGG--WPDAPGGEYAWGYCFISEVSPPSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIIN 771
            K F A  T       K +   F AQT HETTGG  W  AP G Y WGYC+  E++P +DYC  DPNYPC  GK Y+GRGP+QL+WNYNY +C           NNPDLLATDP +SFKSA WFWMT Q PKPSCH+VII  W PS +D  AGR+PG+GL TNIIN
Sbjct:  109 KSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELNP-ADYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLL--NNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIIN 269          

HSP 2 Score: 81.2629 bits (199), Expect = 6.661e-15
Identity = 36/59 (61.02%), Postives = 46/59 (77.97%), Query Frame = 3
Query:  183 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 359
            L  +I+RE FD +L +RND  CPARGFYTYDAFI AA++FP F  +G++  RKRE+AAF
Sbjct:   72 LDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAF 130          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.149e-43
Identity = 67/148 (45.27%), Postives = 90/148 (60.81%), Query Frame = 1
Query:  340 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNII 768
            K +   F AQT H T+GG        Y+WGYC+       SD+C PN  +PC  GK Y+ RGP+Q+++NYNY               NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+  +W P+  D  AGR PGYGLTTNI+
Sbjct:  149 KREVAAFLAQTSHATSGG-------PYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLL--GNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNIL 287          

HSP 2 Score: 67.0106 bits (162), Expect = 4.149e-43
Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 3
Query:  183 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 359
            +  +++ + F+ +L +R+D  CPARGFY Y AF+ AA AFP F  +G+   RKRE+AAF
Sbjct:   97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAF 155          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.149e-43
Identity = 67/148 (45.27%), Postives = 90/148 (60.81%), Query Frame = 1
Query:  340 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNII 768
            K +   F AQT H T+GG        Y+WGYC+       SD+C PN  +PC  GK Y+ RGP+Q+++NYNY               NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+  +W P+  D  AGR PGYGLTTNI+
Sbjct:  149 KREVAAFLAQTSHATSGG-------PYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLL--GNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNIL 287          

HSP 2 Score: 67.0106 bits (162), Expect = 4.149e-43
Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 3
Query:  183 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 359
            +  +++ + F+ +L +R+D  CPARGFY Y AF+ AA AFP F  +G+   RKRE+AAF
Sbjct:   97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAF 155          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.963e-31
Identity = 72/159 (45.28%), Postives = 87/159 (54.72%), Query Frame = 1
Query:  295 KLFQALVTPEMKPCVKEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIIN 771
            K F A  T       K +   F AQT HETTGGWP AP G Y        E+   SDY           +GRGPIQ+S+NYNY               NPDL+ +D  + FK+A+WFWMT Q PKPS H+VI   W PS+ D  AGR+PGYG+ TNII+
Sbjct:   30 KSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPY--------ELGSTSDY-----------FGRGPIQISYNYNYGAAGKAIGVDLL--RNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIID 167          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 1.773e-30
Identity = 54/148 (36.49%), Postives = 79/148 (53.38%), Query Frame = 1
Query:  340 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVS-PPSDYC-DPNYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIIN 771
            K +   F A     T+G   D     +AWG C I+  +   +D+C   ++PC    KY  RGPIQL+ N+NY               NPDL+  DP++SFK+A+WFWM+    KPSCH++++     +AN   A R+P  G+  NII+
Sbjct:  180 KREVAAFLAHISQATSGERSDVEN-PHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNY--GLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIIS 318          

HSP 2 Score: 61.6178 bits (148), Expect = 1.773e-30
Identity = 25/56 (44.64%), Postives = 40/56 (71.43%), Query Frame = 3
Query:  192 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 359
            +++  +FD +  +R D  CP++GFY+Y +F+ AA++FP FG  G+   RKRE+AAF
Sbjct:  133 VVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAF 186          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.090e-22
Identity = 41/109 (37.61%), Postives = 57/109 (52.29%), Query Frame = 1
Query:  340 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFW 648
            K +   FFA   HET               +C+I E+  PS +YCD     +PC  GK YYGRGP+Q+SWN+NY               +PD +A  PVL+F++A+W+W
Sbjct:  119 KREIAAFFAHANHETIK-------------FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNY--GPAGQSIGFDGLGDPDAVARSPVLAFQTALWYW 212          

HSP 2 Score: 55.4546 bits (132), Expect = 1.090e-22
Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 3
Query:  183 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 362
            +  I++ E F  L+  + D+ C A+GFYT DAF+ AA  +P FG +G+    KREIAAFF
Sbjct:   68 VASIVTPEFFAALVA-QADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFF 126          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.846e-22
Identity = 42/111 (37.84%), Postives = 58/111 (52.25%), Query Frame = 1
Query:  340 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTA 657
            K +   FFA   HET               +C+ISE++  + YCDP    +PC    KYYGRGP+Q+SWNYNY               +P  +A D V++FK+A+WFWM +
Sbjct:  120 KREIAAFFAHATHETGH-------------FCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 215          

HSP 2 Score: 47.7506 bits (112), Expect = 1.846e-22
Identity = 19/39 (48.72%), Postives = 26/39 (66.67%), Query Frame = 3
Query:  246 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 362
            C  + FYT  AF+ A + +PGF + G++   KREIAAFF
Sbjct:   89 CEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFF 127          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.285e-22
Identity = 41/109 (37.61%), Postives = 58/109 (53.21%), Query Frame = 1
Query:  340 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 651
            K +   FFA   HET               +C+ISE++  + YCD +   +PC    KYYGRGP+Q+SWNYNY               +P+ +A D V++FK+A+WFWM
Sbjct:  131 KREIAAFFAHVTHETGH-------------FCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 224          

HSP 2 Score: 48.9062 bits (115), Expect = 5.285e-22
Identity = 21/39 (53.85%), Postives = 25/39 (64.10%), Query Frame = 3
Query:  246 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 362
            C  + FYT  AF+ A  A+PGF + G E   KREIAAFF
Sbjct:  100 CEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFF 138          
BLAST of CK936630 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.167e-21
Identity = 48/144 (33.33%), Postives = 70/144 (48.61%), Query Frame = 1
Query:  340 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIIN 771
            K +   +FA   HET           +A  YC  S+  P    C+PN     +Y+GRGP+QLSWNYNY+             N+PD++  DP++SFK+++WFW+     +     VI+D   P+          G+G T  IIN
Sbjct:   97 KREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYP----CNPNK----EYFGRGPMQLSWNYNYI--DAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI-----RKGVQYVILD---PN---------QGFGATIRIIN 213          

HSP 2 Score: 51.6026 bits (122), Expect = 1.167e-21
Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 3
Query:  192 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 362
            I+++E +D +   +    CP + FYT   F+EA  A+PGFG    +  RKREIAA+F
Sbjct:   49 IVTQEFWDGIAS-QAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYF 104          
The following BLAST results are available for this feature:
BLAST of CK936630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHI2_GOSHI6.571e-4758.28Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHI1_THECC1.912e-4658.18Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 S... [more]
CHI7_ORYSJ4.149e-4345.27Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSI4.149e-4345.27Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 ... [more]
CHIT_AVESA2.963e-3145.28Endochitinase (Fragments) OS=Avena sativa PE=1 SV=... [more]
AGI_URTDI1.773e-3036.49Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE... [more]
CHI6_ORYSJ1.090e-2237.61Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIB_MAIZE1.846e-2237.84Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1[more]
CHIA_MAIZE5.285e-2237.61Endochitinase A OS=Zea mays PE=1 SV=1[more]
CHIT_DIOJA1.167e-2133.33Acidic endochitinase OS=Dioscorea japonica PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004520_A04 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936630 ID=CK936630; Name=CK936630; organism=Citrus sinensis; type=EST; length=771bp
GGGGGAACACCAAGCAGAGGATAATTGATATCATAACTGNNNNTTTCAAA
ATGAGGCTTATTGGGTCCTTACTAATTTTCTCTCTAGTTTTATCTTTTGT
ACTAGGAGGCTCAGCACAGAACTGCGGAAGCGGCGTTGTGTACGGTGGAC
GTGATACCGGCCATGGGACGCATGGCGGTGAACTGGGCAAGATCATCTCA
AGGGAGATGTTTGATGACTTGCTTGAGTATAGAAATGATGAACGATGCCC
TGCCAGAGGCTTCTACACTTATGATGCTTTTATAGAGGCAGCCCAAGCTT
TTCCAGGCTTTGGTAACTCCGGAAATGAAACCATGCGTAAAAGAGAAATC
GCTGCCTTTTTTTGCCCAAACTGGCCATGAAACTACTGGGGGATGGCCCG
ATGCACCTGGTGGCGAATATGCTTGGGGATATTGCTTTATAAGCGAAGTT
AGCCCTCCGTCCGACTACTGTGATCCTAACTATCCATGTCGAGGGAAGTA
CTATGGCCGAGGTCCAATTCAACTCTCTTGGAATTACAATTACTTACGGT
GCGGAGAAGGCCTAGGGCTAGGAGAGGAGTTGTTGAACAATCCAGACCTT
CTTGCTACTGATCCAGTACTATCATTCAAGTCAGCAATCTGGTTCTGGAT
GACTGCACAGCCACCAAAGCCATCGTGCCACGAAGTCATTATCGACGAAT
GGAAACCATCAGCAAATGACGTAAACGCCGGCCGGCTTCCGGGATACGGT
CTAACCACAAATATAATCAAC
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