CK936619

Overview
NameCK936619
Unique NameCK936619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936619 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.638e-19
Identity = 51/134 (38.06%), Postives = 73/134 (54.48%), Query Frame = 3
Query:  189 VQPIEVPAISVDELKEIIENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 581
            V P  V   SV +L+    +F  + L+GEG++GRVY      G   A+KK+D+S  P    ++F+  VS ++ L H N  +L+GYC +    ++ YEF  NGSLHD LH        +    L W  RVKIA+G
Sbjct:  396 VVPSNVRLYSVADLQIATGSFSVDNLLGEGTFGRVYRAEFDDGKVLAVKKIDSSALPHGMTDDFIEMVSKIANLDHPNVTKLVGYCAEHGQHLVVYEFHKNGSLHDFLH-----LSEEESKALVWNSRVKIALG 524          
BLAST of CK936619 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.446e-19
Identity = 51/126 (40.48%), Postives = 74/126 (58.73%), Query Frame = 3
Query:  210 AISVDELKEIIENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 584
            A + +EL +   NF     +G G YG+VY G L +G   AIK+    S Q   EF  ++ ++SR+ H+N V+LLG+C D   ++L YE+  NGSL D L G+ GVK       L W +R+KIA+G+
Sbjct:  621 AFTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVK-------LDWTRRLKIALGS 739          
BLAST of CK936619 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.003e-19
Identity = 55/138 (39.86%), Postives = 74/138 (53.62%), Query Frame = 3
Query:  180 AVKVQPIEVPA--ISVDELKEIIENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 584
            ++ V   E P   ++   L E    F  +++IG G +G VY   L  G   AIKKL   + Q D EF+A++  + ++KH N V LLGYC  G  R+L YE+   GSL  +LH  K  KG   G  L W  R KIA+GA
Sbjct:  833 SINVATFEKPLRKLTFAHLLEATNGFSADSMIGSGGFGDVYKAKLADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLH-EKTKKG---GIFLDWSARKKIAIGA 966          

HSP 2 Score: 22.3274 bits (46), Expect = 4.003e-19
Identity = 9/27 (33.33%), Postives = 18/27 (66.67%), Query Frame = 1
Query:   52 ASAVVKKMICIKLLTMAMHTWLKVQQE 132
            ++ +V   +CI +L MA++   KVQ++
Sbjct:  778 SAGIVFSFMCIVMLIMALYRARKVQKK 804          
BLAST of CK936619 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.877e-19
Identity = 52/138 (37.68%), Postives = 75/138 (54.35%), Query Frame = 3
Query:  177 QAVKVQPIEVPAISVDELKEIIENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDE---EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 581
            +A  V P  V   +V +L+    +F  + L+GEG++GRVY    + G   A+KK+D+S  P +   +F   VS ++ L HEN  +L GYC +    ++ YEF  NGSLHD LH        +    L W  RVKIA+G
Sbjct:  395 KAAVVVPSNVNTYTVSDLQVATNSFSVDNLLGEGTFGRVYRAQFEDGKVLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLH-----LAEEESKPLIWNPRVKIALG 527          
BLAST of CK936619 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.003e-18
Identity = 48/124 (38.71%), Postives = 75/124 (60.48%), Query Frame = 3
Query:  216 SVDELKEIIENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 584
            S+ EL+E+ +NF  + +IG G +G VY G +  G   AIK+ +  S+Q   EF  ++ M+S+L+H + V L+GYC +    +L YE+ SNG   D L+G    K   P   L+W+QR++I +GA
Sbjct:  514 SLSELQEVTKNFDASEIIGVGGFGNVYIGTIDDGTQVAIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYG----KNLSP---LTWKQRLEICIGA 630          
BLAST of CK936619 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.710e-18
Identity = 53/132 (40.15%), Postives = 70/132 (53.03%), Query Frame = 3
Query:  195 PIEVPAISVDELKEIIENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD---ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 581
            PI     +V  L+    +F    +IGEGS GRVY     +G   AIKK+D    S Q ++ FL  VS +SRL+H N V L GYC +   R+L YE+  NG+L D LH             L+W  RVK+A+G
Sbjct:  377 PITASQYTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLH-----TNDDRSMNLTWNARVKVALG 503          
BLAST of CK936619 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.710e-18
Identity = 54/141 (38.30%), Postives = 75/141 (53.19%), Query Frame = 3
Query:  186 KVQPIEVPAISVDE-----LKEIIENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD---ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 584
            K  P  +P  SV       L++  E+F    LIG G  G VY   L +G   A+KKLD   + +Q D EF+  V+ +  ++H N V+L+GYC +   R+L YE+ SNG+L D LH     K       LSW  RV +A+GA
Sbjct:  459 KTSPKRLPLTSVKHYSIASLQQYTESFAQENLIGSGMLGSVYRARLPNGKLFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFK-----KKLSWNTRVSMALGA 594          
BLAST of CK936619 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.233e-18
Identity = 48/124 (38.71%), Postives = 75/124 (60.48%), Query Frame = 3
Query:  216 SVDELKEIIENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 584
            S+ EL+E  +NF  + +IG G +G VY G L  G   A+K+ +  S+Q   EF  ++ M+S+L+H + V L+GYC + +  +L YEF SNG   D L+G    K   P   L+W+QR++I +G+
Sbjct:  515 SLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYG----KNLAP---LTWKQRLEICIGS 631          
BLAST of CK936619 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.810e-18
Identity = 50/125 (40.00%), Postives = 71/125 (56.80%), Query Frame = 3
Query:  213 ISVDELKEIIENFGTNALIGEGSYGRVYYGILKSGHAAAIK-KLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 584
            IS+  L+E  +NF     +G GS+G VYYG +K G   A+K   D S   + +F+ +V+++SR+ H N V L+GYC +   R+L YE+  NGSL D LHG    K       L W  R++IA  A
Sbjct:  596 ISLPVLEEATDNFSKK--VGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYK------PLDWLTRLQIAQDA 712          
BLAST of CK936619 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.108e-17
Identity = 51/150 (34.00%), Postives = 80/150 (53.33%), Query Frame = 3
Query:  144 YHASEAAPKGAQAVKVQPIEVPAISV--DELKEIIENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 584
            Y  S +  +   ++ +   E P + V   ++ E  ++F    +IG+G +G VY   L      A+KKL  +K Q + EF+A++  + ++KH N V LLGYC     ++L YE+  NGSL   L  + G+       VL W +R+KIAVGA
Sbjct:  880 YFLSGSRSREPLSINIAMFEQPLLKVRLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGML-----EVLDWSKRLKIAVGA 1024          
The following BLAST results are available for this feature:
BLAST of CK936619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
SRF6_ARATH2.638e-1938.06Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
Y5977_ARATH3.446e-1940.48Probable leucine-rich repeat receptor-like protein... [more]
BRL3_ARATH4.003e-1939.86Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
SRF7_ARATH5.877e-1937.68Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
Y2214_ARATH1.003e-1838.71Probable receptor-like protein kinase At2g21480 OS... [more]
SRF8_ARATH1.710e-1840.15Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
SRF3_ARATH1.710e-1838.30Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
Y4391_ARATH2.233e-1838.71Probable receptor-like protein kinase At4g39110 OS... [more]
Y1677_ARATH3.810e-1840.00Probable LRR receptor-like serine/threonine-protei... [more]
EXS_ARATH1.108e-1734.00Leucine-rich repeat receptor protein kinase EXS OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004520_D04 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936619 ID=CK936619; Name=CK936619; organism=Citrus sinensis; type=EST; length=584bp
TCTCAGCTAGCTTTCATAGAGGGGCATTATTGTGGCAGTGAATCATGAGC
TGCTTCGGCTGTTGTGAAGAAGATGATATGCATAAAGCTGCTGACCATGG
CAATGCATACATGGTTAAAAGTTCAGCAGGAACTGATGGAGCCTATCATG
CATCTGAAGCAGCACCTAAGGGTGCTCAAGCTGTGAAAGTCCAGCCCATT
GAAGTCCCAGCAATTTCAGTGGATGAATTGAAGGAAATTATTGAGAACTT
TGGGACTAATGCTTTGATTGGAGAAGGTTCATATGGAAGAGTATATTATG
GGATTCTTAAGAGTGGACATGCTGCAGCAATAAAAAAGTTGGATGCCAGC
AAGCAACCTGATGAGGAGTTTTTAGCACAGGTTTCCATGGTATCAAGGTT
GAAGCATGAAAACTTTGTTCAGCTGCTCGGGTATTGTGTTGATGGGACTT
CCCGTGTGCTTGCCTACGAGTTTGCATCTAATGGATCTCTTCATGATATT
CTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTGTC
ATGGCAACAGCGAGTGAAAATTGCTGTAGGGGCT
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