CK936614

Overview
NameCK936614
Unique NameCK936614
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_CYAPA (ATP synthase subunit alpha, cyanelle OS=Cyanophora paradoxa GN=atpA PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.178e-40
Identity = 91/143 (63.64%), Postives = 102/143 (71.33%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFT 430
            GQIFL ADLFN+G+RPAINVGISVSRVGSAAQIKAMKQVAGKLK                SDLDKATQ QLARG+RLRELLKQ Q APL VEE++  IYTG NG+LD++E  QV  F+  LR  L   + +F EII S K  T
Sbjct:  341 GQIFLSADLFNSGLRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFDELKAFSQFSSDLDKATQLQLARGERLRELLKQQQYAPLPVEEQVAVIYTGINGFLDNIETKQVSAFISNLRENLSVKRAKFGEIIRSEKALT 483          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_CYAP4 (ATP synthase subunit alpha OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=atpA PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.624e-40
Identity = 86/140 (61.43%), Postives = 100/140 (71.43%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK 421
            GQIFL +DLFNAG+RPAIN GISVSRVGSAAQIKAMKQVAGKLK                SDLDKATQNQLARGQRLRELLKQ Q +P+ VEE++  IY GTNGYLD +   +V  F    R YL  ++P++ E++ S K
Sbjct:  341 GQIFLSSDLFNAGLRPAINAGISVSRVGSAAQIKAMKQVAGKLKLELAQFDELQAFAQFASDLDKATQNQLARGQRLRELLKQPQYSPIPVEEQVALIYAGTNGYLDEIPTDKVTSFTAGFREYLHNSQPKYGELVRSEK 480          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_LEPTE (ATP synthase subunit alpha, chloroplastic OS=Leptosira terrestris GN=atpA PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.635e-40
Identity = 83/143 (58.04%), Postives = 105/143 (73.43%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFT 430
            GQIFL AD+FN+G+RPA+NVGISVSRVGSAAQ+  MKQVAG LK                SDLD+A+QNQLARGQRLRE+LKQ+QA+PL+V +++ +IY GTNG+L  L + QVR FLV LR +L   KP++ E ++S K  T
Sbjct:  343 GQIFLSADIFNSGLRPAVNVGISVSRVGSAAQLPIMKQVAGTLKLELAQFAELEGFSQFSSDLDQASQNQLARGQRLREILKQSQASPLSVPDQVASIYAGTNGFLQKLAVNQVRDFLVGLREFLDKRKPEYLEAVNSEKKLT 485          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_SYNP6 (ATP synthase subunit alpha OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=atpA PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.789e-39
Identity = 82/140 (58.57%), Postives = 102/140 (72.86%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK 421
            GQIFL +DLFN+G+RPAINVGISVSRVGSAAQ KA+K++AG LK                SDLDKATQNQLARGQRLRELLKQ Q +PL + E++  +Y G  G +D + + QV  F+ ELR+YLKT+KP+F E + S+K
Sbjct:  341 GQIFLSSDLFNSGLRPAINVGISVSRVGSAAQTKAIKKIAGTLKLELAQFDELAAFAQFASDLDKATQNQLARGQRLRELLKQPQFSPLILAEQVAVVYAGVKGLIDEIPVNQVTAFVSELRSYLKTSKPEFIEKVQSSK 480          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_SYNE7 (ATP synthase subunit alpha OS=Synechococcus elongatus (strain PCC 7942) GN=atpA PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.789e-39
Identity = 82/140 (58.57%), Postives = 102/140 (72.86%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK 421
            GQIFL +DLFN+G+RPAINVGISVSRVGSAAQ KA+K++AG LK                SDLDKATQNQLARGQRLRELLKQ Q +PL + E++  +Y G  G +D + + QV  F+ ELR+YLKT+KP+F E + S+K
Sbjct:  341 GQIFLSSDLFNSGLRPAINVGISVSRVGSAAQTKAIKKIAGTLKLELAQFDELAAFAQFASDLDKATQNQLARGQRLRELLKQPQFSPLILAEQVAVVYAGVKGLIDEIPVNQVTAFVSELRSYLKTSKPEFIEKVQSSK 480          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_PHATR (ATP synthase subunit alpha, chloroplastic OS=Phaeodactylum tricornutum GN=atpA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.102e-38
Identity = 84/143 (58.74%), Postives = 100/143 (69.93%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFT 430
            GQIFL  DLFN+GIRPAINVGISVSRVGSAAQ KAMK+VAGKLK                SDLD+ATQ QLARG RLRE+LKQ Q +PL+V +++  IYTG NGYLD L +  V+ +   L TYL T+K  + EI+ +T  FT
Sbjct:  341 GQIFLSNDLFNSGIRPAINVGISVSRVGSAAQTKAMKKVAGKLKLELAQFAELEAFSQFASDLDEATQKQLARGTRLREVLKQPQNSPLSVAQQVALIYTGINGYLDDLPVSNVKSYCASLMTYLTTSKKPYTEIVRTTNQFT 483          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_ODOSI (ATP synthase subunit alpha, chloroplastic OS=Odontella sinensis GN=atpA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.102e-38
Identity = 85/143 (59.44%), Postives = 101/143 (70.63%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFT 430
            GQIFL  DLFN+GIRPAINVGISVSRVGSAAQ KAMKQVAGKLK                SDLD+ATQ QLARG RLRE+LKQ Q +PL+V E++  IYTG NG+LD LE+  V+K+   L ++L T+   +  I+SST  FT
Sbjct:  341 GQIFLSNDLFNSGIRPAINVGISVSRVGSAAQTKAMKQVAGKLKLELAQFAELEAFSQFASDLDEATQKQLARGTRLREVLKQPQNSPLSVAEQVALIYTGINGFLDELEVASVKKYCASLLSFLNTSNNSYIGIVSSTNQFT 483          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_TRIEI (ATP synthase subunit alpha OS=Trichodesmium erythraeum (strain IMS101) GN=atpA PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.440e-38
Identity = 81/143 (56.64%), Postives = 101/143 (70.63%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFT 430
            GQIFL +DLFNAG RPA+N GISVSRVGSAAQ KA+K+VAGK+K                SDLDKATQNQLARGQRLRE+LKQ Q +P ++ E++  IY+G NGYLD + + +  KF+  L  YL  +KP+F EII + K+ T
Sbjct:  341 GQIFLSSDLFNAGFRPAVNAGISVSRVGSAAQTKAIKKVAGKIKLELAQFAELEAFSQFASDLDKATQNQLARGQRLREILKQPQNSPRSLPEQVAAIYSGINGYLDDIPLEKAAKFIAGLLDYLNNSKPKFGEIIKTEKVLT 483          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_EMIHU (ATP synthase subunit alpha, chloroplastic OS=Emiliania huxleyi GN=atpA PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.881e-38
Identity = 83/140 (59.29%), Postives = 101/140 (72.14%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK 421
            GQIFL  DLFN+GIRPAINVGISVSRVGSAAQ KAMKQVAGKLK                SDLD ATQ +LARG RLRE+LKQ Q +P++VEE++  IY G NGYLD++ + +V+ F+ +LR+YL+ + PQF   I S K
Sbjct:  341 GQIFLSGDLFNSGIRPAINVGISVSRVGSAAQTKAMKQVAGKLKLELAQFAELEAFSQFASDLDAATQAELARGVRLREMLKQKQNSPISVEEQVAIIYAGINGYLDTIPVSEVKGFVEKLRSYLRNSAPQFISSIQSEK 480          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA1_ACAM1 (ATP synthase subunit alpha 1 OS=Acaryochloris marina (strain MBIC 11017) GN=atpA1 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.208e-38
Identity = 84/140 (60.00%), Postives = 99/140 (70.71%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK 421
            GQIFL +DLFNAG+RPAIN GISVSRVGSAAQIKAMKQVAGKLK                SDLD+ATQNQLARG RLRE+LKQ Q +PL VEE +  IY GTNGYLD +   +V +F+  +R  LK N  ++ E++ S K
Sbjct:  341 GQIFLSSDLFNAGLRPAINAGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDQATQNQLARGARLREILKQPQYSPLPVEEMVAVIYAGTNGYLDDVPTDKVTEFVQGMRDDLKANHAKYGELVRSEK 480          
The following BLAST results are available for this feature:
BLAST of CK936614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_CYAPA1.178e-4063.64ATP synthase subunit alpha, cyanelle OS=Cyanophora... [more]
ATPA_CYAP42.624e-4061.43ATP synthase subunit alpha OS=Cyanothece sp. (stra... [more]
ATPA_LEPTE7.635e-4058.04ATP synthase subunit alpha, chloroplastic OS=Lepto... [more]
ATPA_SYNP63.789e-3958.57ATP synthase subunit alpha OS=Synechococcus sp. (s... [more]
ATPA_SYNE73.789e-3958.57ATP synthase subunit alpha OS=Synechococcus elonga... [more]
ATPA_PHATR1.102e-3858.74ATP synthase subunit alpha, chloroplastic OS=Phaeo... [more]
ATPA_ODOSI1.102e-3859.44ATP synthase subunit alpha, chloroplastic OS=Odont... [more]
ATPA_TRIEI1.440e-3856.64ATP synthase subunit alpha OS=Trichodesmium erythr... [more]
ATPA_EMIHU1.881e-3859.29ATP synthase subunit alpha, chloroplastic OS=Emili... [more]
ATPA1_ACAM13.208e-3860.00ATP synthase subunit alpha 1 OS=Acaryochloris mari... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004520_C06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936614 ID=CK936614; Name=CK936614; organism=Citrus sinensis; type=EST; length=571bp
CGGGCAAATATTCTTACCTGCGGATTTATTCAATGCTGGAATCAGACCCG
CTATTAATGTGGGTATTTCCGTCTCTCGAGTAGGATCCGCAGCTCAAATT
AAAGCTATGAAACAAGTAGCCGGCAAATTAAAATTGGAATTGGCACAATT
CGCAGAATTAGAAGCCTTTGCACAATTTGCTTCTGATCTCGATAAAGCTA
CTCAGAACCAATTGGCAAGGGGTCAACGCTTACGTGAGTTGCTCAAACAG
GCCCAAGCAGCCCCTCTCACGGTGGAAGAACGGATAATGACTATTTATAC
AGGAACGAATGGTTATCTTGATTCATTAGAAATTGGTCAAGTAAGAAAAT
TTCTCGTTGAGTTACGTACTTACTTAAAAACGAATAAACCTCAGTTCCAA
GAAATAATATCTTCTACCAAGATATTCACCGAAGAAGCAGAAGCCCTTTT
GCAAGAAGCTATTCAGGAACAAAAGGAACGTTTTCTACTTCAGGAACAAT
TCTAAATAAAAAACCACTCTTATTCTTACTTTATAATACTTAATAAAAAA
AAAAAAAAAAAAAAAAAAAAA
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