CK936614

Overview
NameCK936614
Unique NameCK936614
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_OENPA (ATP synthase subunit alpha, chloroplastic OS=Oenothera parviflora GN=atpA PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 3.772e-55
Identity = 118/165 (71.52%), Postives = 124/165 (75.15%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQE 496
            GQIFL ADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLK                SDLDKATQNQLARGQRLRELLKQ+QA PLTV E+I+TIYTGTNGYLDS EI QVRKFL ELR Y+KT KPQF+EIISSTKIFT                 FL+QE
Sbjct:  341 GQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFSSDLDKATQNQLARGQRLRELLKQSQAKPLTVAEQILTIYTGTNGYLDSFEIAQVRKFLDELRDYVKTRKPQFEEIISSTKIFTEEAQALLKDAIQEQKELFLVQE 505          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_OENEH (ATP synthase subunit alpha, chloroplastic OS=Oenothera elata subsp. hookeri GN=atpA PE=3 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 3.772e-55
Identity = 118/165 (71.52%), Postives = 124/165 (75.15%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQE 496
            GQIFL ADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLK                SDLDKATQNQLARGQRLRELLKQ+QA PLTV E+I+TIYTGTNGYLDS EI QVRKFL ELR Y+KT KPQF+EIISSTKIFT                 FL+QE
Sbjct:  341 GQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFSSDLDKATQNQLARGQRLRELLKQSQAKPLTVAEQILTIYTGTNGYLDSFEIAQVRKFLDELRDYVKTRKPQFEEIISSTKIFTEEAQALLKDAIQEQKELFLVQE 505          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_OENBI (ATP synthase subunit alpha, chloroplastic OS=Oenothera biennis GN=atpA PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 3.772e-55
Identity = 118/165 (71.52%), Postives = 124/165 (75.15%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQE 496
            GQIFL ADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLK                SDLDKATQNQLARGQRLRELLKQ+QA PLTV E+I+TIYTGTNGYLDS EI QVRKFL ELR Y+KT KPQF+EIISSTKIFT                 FL+QE
Sbjct:  341 GQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFSSDLDKATQNQLARGQRLRELLKQSQAKPLTVAEQILTIYTGTNGYLDSFEIAQVRKFLDELRDYVKTRKPQFEEIISSTKIFTEEAQALLKDAIQEQKELFLVQE 505          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_OENAR (ATP synthase subunit alpha, chloroplastic OS=Oenothera argillicola GN=atpA PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 3.772e-55
Identity = 118/165 (71.52%), Postives = 124/165 (75.15%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQE 496
            GQIFL ADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLK                SDLDKATQNQLARGQRLRELLKQ+QA PLTV E+I+TIYTGTNGYLDS EI QVRKFL ELR Y+KT KPQF+EIISSTKIFT                 FL+QE
Sbjct:  341 GQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFSSDLDKATQNQLARGQRLRELLKQSQAKPLTVAEQILTIYTGTNGYLDSFEIAQVRKFLDELRDYVKTRKPQFEEIISSTKIFTEEAQALLKDAIQEQKELFLVQE 505          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_PEA (ATP synthase subunit alpha, chloroplastic OS=Pisum sativum GN=atpA PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 8.402e-55
Identity = 113/143 (79.02%), Postives = 120/143 (83.92%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFT 430
            GQIFL ADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLK                SDLDKATQNQLARGQRLRELLKQ+Q+APLTVEE+I+TIYTGTN YLDS+EI QVRKF+VELR YLKT KP+F EIISSTK FT
Sbjct:  341 GQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIITIYTGTNSYLDSVEIAQVRKFIVELRAYLKTKKPKFNEIISSTKTFT 483          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_CUSEX (ATP synthase subunit alpha, plastid OS=Cuscuta exaltata GN=atpA PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 8.402e-55
Identity = 116/166 (69.88%), Postives = 127/166 (76.51%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 499
            GQIFL ADLFNAGIRPAINVGISVSRVGSAAQIKAMK+VAGKLK                SDLDK +QNQLARGQRLRELLKQ+Q+APLTV E+IMTIYTG NGYLDSL++ QVRKFL+EL TYLKTNKP+FQEIISSTK FT                RFL++EQ
Sbjct:  341 GQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAELEAFAQFASDLDKTSQNQLARGQRLRELLKQSQSAPLTVAEQIMTIYTGINGYLDSLQLRQVRKFLLELCTYLKTNKPRFQEIISSTKTFTEEAEDLLKEAIRDQTDRFLVKEQ 506          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_JASNU (ATP synthase subunit alpha, chloroplastic OS=Jasminum nudiflorum GN=atpA PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.872e-54
Identity = 117/164 (71.34%), Postives = 124/164 (75.61%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQ 493
            GQIFL ADLFNAGIRPAINVGISVSRVGSAAQ KAMKQVAGKLK                SDLDKATQ+QLARG+RLRELLKQ+Q+APLTV E+IMT+YTGT GYLDSLEIGQV KFL  LRT+LKTNKPQFQEIISSTK FT                RFLLQ
Sbjct:  341 GQIFLSADLFNAGIRPAINVGISVSRVGSAAQTKAMKQVAGKLKLELAQFTELEAFAQFASDLDKATQSQLARGRRLRELLKQSQSAPLTVGEQIMTVYTGTKGYLDSLEIGQVSKFLDALRTHLKTNKPQFQEIISSTKTFTEEAEVLLKEAIQEQMERFLLQ 504          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_DIOEL (ATP synthase subunit alpha, chloroplastic OS=Dioscorea elephantipes GN=atpA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.193e-54
Identity = 117/166 (70.48%), Postives = 123/166 (74.10%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 499
            GQIFL ADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGK K                SDLDKATQNQLARGQRLRELLKQ+Q+ PL VEE+I TIYTG NGYLD LEIGQV+KFLV+LRTYLK NK QF+EIISSTK FT                 FLLQEQ
Sbjct:  341 GQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSDPLAVEEQIATIYTGANGYLDPLEIGQVKKFLVQLRTYLKKNKSQFKEIISSTKTFTEEAEALLKGAVQEQIELFLLQEQ 506          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_PHAAO (ATP synthase subunit alpha, chloroplastic OS=Phalaenopsis aphrodite subsp. formosana GN=atpA PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 4.170e-54
Identity = 116/166 (69.88%), Postives = 124/166 (74.70%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 499
            GQIFL ADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGK K                SDLDKATQNQLARGQRLRELLKQ+Q+ PL VE++I TIYTGTNGYLD+LEIGQV+KFLV LRTYL   KP+FQEI+SSTKIFT                 FLLQEQ
Sbjct:  341 GQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSDPLAVEDQIATIYTGTNGYLDALEIGQVKKFLVGLRTYLTKKKPKFQEILSSTKIFTEEAETLLREAIQEQIELFLLQEQ 506          
BLAST of CK936614 vs. ExPASy Swiss-Prot
Match: ATPA_MARPO (ATP synthase subunit alpha, chloroplastic OS=Marchantia polymorpha GN=atpA PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.113e-54
Identity = 114/166 (68.67%), Postives = 123/166 (74.10%), Query Frame = 2
Query:    2 GQIFLPADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEERIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 499
            GQIFL ADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLK                SDLDKATQNQLARGQRLRELLKQ+Q+APL+VEE+I TIYTG NGYLD LE GQV+KFL++LR YL TNKPQF EII STK+FT                 FL QE+
Sbjct:  341 GQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLSVEEQIATIYTGVNGYLDVLETGQVKKFLIQLREYLVTNKPQFAEIIRSTKVFTEQAENLLKEAITEHIELFLFQEE 506          
The following BLAST results are available for this feature:
BLAST of CK936614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_OENPA3.772e-5571.52ATP synthase subunit alpha, chloroplastic OS=Oenot... [more]
ATPA_OENEH3.772e-5571.52ATP synthase subunit alpha, chloroplastic OS=Oenot... [more]
ATPA_OENBI3.772e-5571.52ATP synthase subunit alpha, chloroplastic OS=Oenot... [more]
ATPA_OENAR3.772e-5571.52ATP synthase subunit alpha, chloroplastic OS=Oenot... [more]
ATPA_PEA8.402e-5579.02ATP synthase subunit alpha, chloroplastic OS=Pisum... [more]
ATPA_CUSEX8.402e-5569.88ATP synthase subunit alpha, plastid OS=Cuscuta exa... [more]
ATPA_JASNU1.872e-5471.34ATP synthase subunit alpha, chloroplastic OS=Jasmi... [more]
ATPA_DIOEL3.193e-5470.48ATP synthase subunit alpha, chloroplastic OS=Diosc... [more]
ATPA_PHAAO4.170e-5469.88ATP synthase subunit alpha, chloroplastic OS=Phala... [more]
ATPA_MARPO7.113e-5468.67ATP synthase subunit alpha, chloroplastic OS=March... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004520_C06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936614 ID=CK936614; Name=CK936614; organism=Citrus sinensis; type=EST; length=571bp
CGGGCAAATATTCTTACCTGCGGATTTATTCAATGCTGGAATCAGACCCG
CTATTAATGTGGGTATTTCCGTCTCTCGAGTAGGATCCGCAGCTCAAATT
AAAGCTATGAAACAAGTAGCCGGCAAATTAAAATTGGAATTGGCACAATT
CGCAGAATTAGAAGCCTTTGCACAATTTGCTTCTGATCTCGATAAAGCTA
CTCAGAACCAATTGGCAAGGGGTCAACGCTTACGTGAGTTGCTCAAACAG
GCCCAAGCAGCCCCTCTCACGGTGGAAGAACGGATAATGACTATTTATAC
AGGAACGAATGGTTATCTTGATTCATTAGAAATTGGTCAAGTAAGAAAAT
TTCTCGTTGAGTTACGTACTTACTTAAAAACGAATAAACCTCAGTTCCAA
GAAATAATATCTTCTACCAAGATATTCACCGAAGAAGCAGAAGCCCTTTT
GCAAGAAGCTATTCAGGAACAAAAGGAACGTTTTCTACTTCAGGAACAAT
TCTAAATAAAAAACCACTCTTATTCTTACTTTATAATACTTAATAAAAAA
AAAAAAAAAAAAAAAAAAAAA
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