CK936604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: CYOE_PSEU5 (Protoheme IX farnesyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=cyoE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.289e-15 Identity = 52/143 (36.36%), Postives = 80/143 (55.94%), Query Frame = 2 Query: 344 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIP 769 R Y EL+K ++ +L++ TS G L + + + L + G + A A ++N + + D+ M RT +RPL GR+S A+T+A +GV+G ALL N L A L ++LI YA +YT LK+ P N +G + GA P Sbjct: 15 RDYLELTKPKVVLLMLITSLVGMFLATRAGVPWTVLLFGNLGIALCAGGAAAVNHVVDRQIDSVMARTHKRPLAEGRVSPAAALTFAFVLGVSGLALLLTFTNALAAWLTLASLIGYAVIYTGFLKRATPQNIVIGGLAGAAP 157
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: COXX_FLAPJ (Protoheme IX farnesyltransferase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=ctaB PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.289e-15 Identity = 58/142 (40.85%), Postives = 81/142 (57.04%), Query Frame = 2 Query: 356 ELSKARLSMLVVATSGTGFALG----SGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIP 769 E++KA L++ VV +S G+ LG + TI + L G MV AS N+ NQ+ E D M RT RP+PSGR+SV A T A+ + + G +L + N TA A ++ LY VYTPLK + ++ +VGA GAIP Sbjct: 19 EITKAGLAISVVFSSLAGYLLGIHEFNLETIYVL-LMLAIGGYCMVGAS-NAYNQIIEKDLDTLMNRTKNRPIPSGRMSVNTAFTIATILTITGLTIL-YMINPKTAMFGAISIFLYTCVYTPLKTVTSLSVFVGAFPGAIP 157
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: CYOE1_PSEF5 (Protoheme IX farnesyltransferase 1 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=cyoE1 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.990e-15 Identity = 53/143 (37.06%), Postives = 80/143 (55.94%), Query Frame = 2 Query: 344 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIP 769 R Y EL+K ++ +L++ TS G L + + + L + G + A A ++N + + DA M RT +RPL GR+S R A+ +A + +AG ALL N LTA L ++L+ YA VYT LK+ P N +G + GA P Sbjct: 16 RDYLELTKPKVVVLMLITSLVGMFLATRAGVPWTVLVFGNLGIALCAGGAAAVNHVVDRRIDALMARTHKRPLAEGRVSPRAALAFALLLALAGQALLLTFTNPLTAWLTLASLLGYAVVYTGFLKRATPQNIVIGGLAGAAP 158
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: COXX_CYAP7 (Protoheme IX farnesyltransferase OS=Cyanothece sp. (strain PCC 7424) GN=ctaB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.990e-15 Identity = 49/143 (34.27%), Postives = 75/143 (52.45%), Query Frame = 2 Query: 344 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYT-PLKQIHPVNTWVGAIVGAIP 769 + Y++L+K R+ L++ T+ + S +D L T G + AASA +LN +++ D M RT RP+PSGR+ HA+ +A + V L NM +A LA S + Y +YT LK+ P N +G G+IP Sbjct: 18 KSYYQLTKPRIIPLLLITTAAAMWIASNGQVDPVLLLVTLLGGTLAAASAQTLNCIYDQDIDYAMLRTRARPIPSGRVRPLHALIFAIILAVLSFTLFVVFVNMASALLAMSGIAFYMLIYTHMLKRHSPQNIVIGGAAGSIP 160
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: COXX_SYNJB (Protoheme IX farnesyltransferase OS=Synechococcus sp. GN=ctaB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.905e-15 Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = 2 Query: 344 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIP 769 R Y +L K ++ L++ T T A+ D T G + AA+AN +N +++ D M+RT RPLPSGRI R A+ ++ + +A LLA N+L AGLA S +++Y VYT LK+ N +G GAIP Sbjct: 25 RSYSQLVKPKIIALLLMT--TAGAMWMAGNTDPFRFFITLLGGGIAAAAANVINMVYDTDIDRMMERTRHRPLPSGRIRARDALIFSGILALAAFGLLAIFTNLLAAGLAMSGILVYVGVYTHWLKRSSTQNIVIGGAAGAIP 165
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: CYOE_MARAV (Protoheme IX farnesyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=cyoE PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.100e-15 Identity = 49/143 (34.27%), Postives = 80/143 (55.94%), Query Frame = 2 Query: 344 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIP 769 R Y EL+K R+ L++ TS G L + + + L + G ++A +A +N + + D M RT +RP+ +GRI+ A+ +A+ + G +L W+ N LTA L ++L+ YA VYT LK+ P N +G + GA+P Sbjct: 18 RDYLELTKPRVVALMILTSVIGMLLAAPGVPEWSVLLFGNLGIALLAGAAAVVNHVVDQKIDTVMARTRKRPVATGRIAPLDALLFATVLAALGMVVLVWQVNELTAWLTLASLVGYAGVYTLFLKRATPQNIVIGGLAGAMP 160
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: COXX_AGRT5 (Protoheme IX farnesyltransferase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ctaB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.100e-15 Identity = 51/143 (35.66%), Postives = 73/143 (51.05%), Query Frame = 2 Query: 344 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIP 769 R Y+EL K R+ LVV T+ G L G + GL + A ++ +LN ++ DA M RT +RP+PSGRI+ R A+ + ++ +L N +AGL A + YA VYT LK+ P N +G GA P Sbjct: 23 RDYFELLKPRVMSLVVFTAFAGLVLAPGEINPILGLI-AILCIAVGAGASGALNMWYDADIDAVMTRTAKRPIPSGRIAPREALAFGLTLSAFSVVILGLAVNWFSAGLLAFTIFFYAVVYTMWLKRSTPQNIVIGGAAGAFP 164
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: COXX_GLOVI (Protoheme IX farnesyltransferase OS=Gloeobacter violaceus GN=ctaB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.661e-15 Identity = 54/142 (38.03%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 350 YWELSKARLS-MLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIP 769 Y++L+K R+ +L++ T+G + G G L L T G + A+SAN+ N L + D M+RT RR +P+GRI A +A+++GVA A+LA AN+ A LA S + Y +YT LK+ N +G GAIP Sbjct: 23 YYQLTKPRIQVLLLITTAGAMWIAGKGHVEPLL-LLVTLLGGTLAASSANAFNCLIDRDIDLLMERTRRRAIPAGRILPWQAALFATALGVASFAVLAAFANLFAALLAISGIGFYVVIYTLWLKRTTTQNIVIGGAAGAIP 163
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: COXX_THEEB (Protoheme IX farnesyltransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=ctaB PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 8.699e-15 Identity = 51/141 (36.17%), Postives = 77/141 (54.61%), Query Frame = 2 Query: 350 YWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIP 769 Y +L+K RL +L + T+ + + L T AA+AN++N L++ DA M+RT RPLP+GR++ AV A + + +LLA AN+L+A LA + + +Y VYT LK+ P N +G GAIP Sbjct: 21 YVQLTKPRLILLFLITTAAAMEVAGQGRVSPQLLLITLGSGTCAAAAANTINCLYDRDIDAVMERTRHRPLPAGRVAPWEAVFLAVLLAITAFSLLAAFANLLSACLAMAGIAVYVGVYTHWLKRSSPQNIVIGGAAGAIP 161
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: CYOE_PSYIN (Protoheme IX farnesyltransferase OS=Psychromonas ingrahamii (strain 37) GN=cyoE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.136e-14 Identity = 54/145 (37.24%), Postives = 80/145 (55.17%), Query Frame = 2 Query: 350 YWELSKARLSMLVVATSGTGFAL----GSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIP 769 Y EL K ++ L+V T+ G AL G G + L L G ++++SA +N + + DAKM RT RPL +S R A+ +++ +G G +LL + AN LTA + L+ YAFVYT LK+ P N +G + GA+P Sbjct: 32 YLELCKIKVVALLVLTALVGLALAPDMGRGYFVQLLSLF----GIGLLSSSAAVINHIVDSKIDAKMVRTKNRPLVRKAVSRRQALIFSAVIGTLGFSLLVFAANWLTAQMTLFALVGYAFVYTMFLKRATPQNIVIGGLAGAMP 172 The following BLAST results are available for this feature:
BLAST of CK936604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 228
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936604 ID=CK936604; Name=CK936604; organism=Citrus sinensis; type=EST; length=770bpback to top |