CK936592

Overview
NameCK936592
Unique NameCK936592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length402
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_VIBF1 (4-hydroxybenzoate octaprenyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=ubiA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.806e-12
Identity = 38/131 (29.01%), Postives = 57/131 (43.51%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHW 393
            G+ LL WP +W + +AA     PD+ ++              C +ND  DR +D  V+RT  RP+ SGL++                      N  + +     ++   +YP MKR T+ PQ  LGL F W
Sbjct:   20 GSLLLLWPTLWALFLAADG--LPDWHVLIVFVLGVVFMRSAGCVINDFADRKVDGHVKRTANRPLPSGLISSKEALSLFAVLVVCSFLLVLTMNTLTIMLSGIGIVLAIAYPFMKRVTYLPQFVLGLAFSW 148          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_SACD2 (4-hydroxybenzoate octaprenyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=ubiA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.806e-12
Identity = 40/131 (30.53%), Postives = 55/131 (41.98%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHW 393
            G +L+ WP +W++ +AA     PD+ ++              C +ND  DR ID  V RT  RP+ +GL+TP                     N  +        L  F YP MKR+T  PQ  LG  F W
Sbjct:   32 GIYLVLWPTLWSLWIAADG--LPDWDVLVIFVLGVVLMRSAGCVINDFADRKIDGHVRRTANRPLVTGLITPKQAVLFFVALLVIAFILVLFTNPLTIKLSFGGALLAFCYPFMKRYTQLPQIVLGAAFAW 160          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_HAES2 (4-hydroxybenzoate octaprenyltransferase OS=Haemophilus somnus (strain 2336) GN=ubiA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.806e-12
Identity = 39/131 (29.77%), Postives = 56/131 (42.75%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHW 393
            GT LL WP +W + +A      P   ++              C +ND  DR ID  V+RT LRP+++G  TP                     N ++      +++  F YP MKR+T  PQ +LG  F W
Sbjct:   23 GTLLLLWPTLWALYLAEKA--MPTLSVLAIFIFGVFLMRSAGCVINDYADRHIDGKVKRTSLRPLSTGRATPREAKWLFIVLVFCSFLLVLCLNLYTIGLSVIAVILAFIYPFMKRYTHLPQFFLGAAFGW 151          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_HAES1 (4-hydroxybenzoate octaprenyltransferase OS=Haemophilus somnus (strain 129Pt) GN=ubiA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.806e-12
Identity = 39/131 (29.77%), Postives = 56/131 (42.75%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHW 393
            GT LL WP +W + +A      P   ++              C +ND  DR ID  V+RT LRP+++G  TP                     N ++      +++  F YP MKR+T  PQ +LG  F W
Sbjct:   23 GTLLLLWPTLWALYLAEKA--MPTLSVLAIFICGVFLMRSAGCVINDYADRHIDGKVKRTSLRPLSTGRATPREAKWLFIVLVFCSFLLVLCLNLYTIGLSVIAVILAFIYPFMKRYTHLPQFFLGAAFGW 151          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_VIBPA (4-hydroxybenzoate octaprenyltransferase OS=Vibrio parahaemolyticus GN=ubiA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.359e-12
Identity = 39/131 (29.77%), Postives = 57/131 (43.51%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHW 393
            G+ LL WP +W + +AA     P + ++              C +ND  DR +D  V+RT+ RP+ SG +T                      N  +     + L+  F YP MKR+T  PQ +LGL F W
Sbjct:   20 GSLLLLWPTVWALVIAAQG--IPSWDVLIVFVLGVFLMRSAGCVINDFADRKVDGHVKRTKQRPLPSGKVTAKEAIGLFLVLAVSSFLLVLTMNPLTIQLSFAGLVLAFIYPFMKRYTHIPQLFLGLAFSW 148          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_PSEU2 (4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ubiA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.359e-12
Identity = 38/132 (28.79%), Postives = 54/132 (40.91%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWG 396
            G +LL WP +W + +A      P  + +              C +ND  DR +D  V+RT  RP+ SG ++P                     N  +       L    SYP MKR+T++PQ  LG  F WG
Sbjct:   30 GVYLLLWPTLWAVWIAGKGA--PSLQTVCIFVLGVFLMRAAGCVINDFADRKVDGHVKRTEQRPLVSGKVSPREALVLFAVLVGLSFVLVLFTNAATIWLSFGGLALAASYPFMKRYTYYPQVVLGAAFSWG 159          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_METFK (4-hydroxybenzoate octaprenyltransferase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=ubiA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.359e-12
Identity = 44/132 (33.33%), Postives = 58/132 (43.94%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWG 396
            G  LL WP +W I +A+P   +PD  ++              C +NDL DR+ D  VERTR RP+ +G +T                      N         +L    SYPL KRF   PQAYLG+ F +G
Sbjct:   24 GILLLLWPTLWGIWLASPG--WPDGLVLFVFIAGTVLMRSAGCVMNDLADRNFDGHVERTRQRPLVTGDVTTKEAVLLALALSLVAFILVLQLNPLVVALSFPALFLAASYPLTKRFLSIPQAYLGIAFGFG 153          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_METCA (4-hydroxybenzoate octaprenyltransferase OS=Methylococcus capsulatus GN=ubiA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.359e-12
Identity = 43/131 (32.82%), Postives = 54/131 (41.22%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHW 393
            G +LL WP +W + +A      PD  +               C +ND  DR+ D  VERTRLRPIA+G +T                      N  +            SYP  KR+T  PQAYLGL F W
Sbjct:   25 GIFLLLWPALWALWIAGEGR--PDPGVAAVIVFGVVLMRAAGCVINDYADREFDPHVERTRLRPIAAGEVTSKEALILFMVLCLTAFALVLTMNWLTIALSVPGAFLAASYPFTKRYTHLPQAYLGLAFGW 153          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_TOLAT (4-hydroxybenzoate octaprenyltransferase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=ubiA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.081e-12
Identity = 40/131 (30.53%), Postives = 52/131 (39.69%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHW 393
            GT LL WP +W + +A+     P F ++              C +ND  DR  D  V+RT  RP+ +G LT                      N F+       LL    YP MKR T  PQ  LG+ F W
Sbjct:   23 GTLLLLWPTLWALWLAS--AGVPSFSLLLIFTAGVFVMRSAGCVINDYADRKFDGYVKRTASRPLPAGRLTAVRALLFFLLLVLIAFVLVWQLNQFTIYLSVGGLLLAAIYPFMKRVTSLPQVVLGMAFSW 151          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_SHEWM (4-hydroxybenzoate octaprenyltransferase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=ubiA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.081e-12
Identity = 40/131 (30.53%), Postives = 57/131 (43.51%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHW 393
            GT LL WPC+  + +AA  G  PD K++              C +ND  DR +D+ VERT+ RP+ASG ++                      N          ++    YP  KRFT  PQ +LG+ + W
Sbjct:   21 GTLLLMWPCLMALVLAA--GGMPDLKVLVIFIIGVVVMRACGCIINDYADRKLDSHVERTKSRPLASGEVSVKEALTLFVVMGLIAFGLVLMLNPLVVQLSFVGIILTIIYPFTKRFTNMPQMFLGVVWSW 149          
The following BLAST results are available for this feature:
BLAST of CK936592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
UBIA_VIBF11.806e-1229.014-hydroxybenzoate octaprenyltransferase OS=Vibrio ... [more]
UBIA_SACD21.806e-1230.534-hydroxybenzoate octaprenyltransferase OS=Sacchar... [more]
UBIA_HAES21.806e-1229.774-hydroxybenzoate octaprenyltransferase OS=Haemoph... [more]
UBIA_HAES11.806e-1229.774-hydroxybenzoate octaprenyltransferase OS=Haemoph... [more]
UBIA_VIBPA2.359e-1229.774-hydroxybenzoate octaprenyltransferase OS=Vibrio ... [more]
UBIA_PSEU22.359e-1228.794-hydroxybenzoate octaprenyltransferase OS=Pseudom... [more]
UBIA_METFK2.359e-1233.334-hydroxybenzoate octaprenyltransferase OS=Methylo... [more]
UBIA_METCA2.359e-1232.824-hydroxybenzoate octaprenyltransferase OS=Methylo... [more]
UBIA_TOLAT3.081e-1230.534-hydroxybenzoate octaprenyltransferase OS=Tolumon... [more]
UBIA_SHEWM3.081e-1230.534-hydroxybenzoate octaprenyltransferase OS=Shewane... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004520_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936592 ID=CK936592; Name=CK936592; organism=Citrus sinensis; type=EST; length=402bp
GGGACGTGGCTGCTGGCTTGGCCTTGTATGTGGACAATTACAATGGCGGC
GCCACCTGGACACTTTCCGGATTTCAAAATGATGGCGCTCTTTGGCTGTG
GCGCTCTCCTTCTACGCGGGGCCGGGTGTACCGTTAATGACCTCCTTGAT
AGGGATATTGATAATATGGTGGAACGCACAAGGTTAAGGCCCATTGCGAG
TGGTCTTCTAACACCGTTTCAAGGACTTTCTTTTCTTGGGTTTCAATTGC
TTTTAGGTCTTGGGATTCTTCTCCAGTTGAATAATTTTAGCCGCATTCCG
GGGGCTTCATCTTTGCTGGNAGTCTTCTCCTACCCCCTCATGAAGAGGTT
TACTTTTTGGCCTCAAGCCTATCTAGGTTTGACCTTTCACTGGGGAGCCT
TA
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