CK936576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936576 vs. ExPASy Swiss-Prot
Match: CYF_PROMM (Apocytochrome f OS=Prochlorococcus marinus (strain MIT 9313) GN=petA PE=3 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 1.174e-73 Identity = 136/264 (51.52%), Postives = 180/264 (68.18%), Query Frame = 3 Query: 21 AYPIFAQQGFENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGALNVGAVLILPEGFELAPPDRISPEMKEKIGKLSFQTYRPTKKNILVIGPVPGQKYSEITFPILSPNPATNKDAYFLKYPIYVGGNRGRGQIYPDGNKSNNTVYNATSAGIVSKIIRKEKGGYEITITDASNGREVVDIIPPGPELRVSEGQSIKLDQPLTSNPNVGGFGQADAEIVLQDPLRVQGLLFFLASVVL 812 AYP +AQQ ++NPREATG+IVCANCHLA K EVPQ+VLPD+VF+AVV+IPY ++ ++G L VGAV++LP+GF LAP DR S E+KE+ + F Y K+NIL++GP+PG EI FPILSP+PAT+ F KY I+VGGNRGRGQI P G K+NN + AT AG ++ I + G +I + +G+ + + IP GP L V ++ PLTS+PN GGFGQ D E+VLQ+P+R+ GLL F +V L Sbjct: 27 AYPFWAQQNYDNPREATGKIVCANCHLAQKTTQAEVPQSVLPDSVFKAVVKIPYKKDTTEISSDGSDVPLQVGAVVMLPDGFRLAPQDRWSEEIKEETKGVFFTQYSEEKENILLVGPLPGDNNKEIVFPILSPDPATDSSIQFGKYSIHVGGNRGRGQILPTGEKTNNNAFTATEAGTITSIKSGKNGESDIKL-KTDSGKVISETIPAGPSLLVKVDDKVEAGAPLTSDPNSGGFGQLDTEVVLQNPVRIYGLLAFFVAVSL 289
BLAST of CK936576 vs. ExPASy Swiss-Prot
Match: CYF_PROM3 (Apocytochrome f OS=Prochlorococcus marinus (strain MIT 9303) GN=petA PE=3 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 1.174e-73 Identity = 136/264 (51.52%), Postives = 181/264 (68.56%), Query Frame = 3 Query: 21 AYPIFAQQGFENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGALNVGAVLILPEGFELAPPDRISPEMKEKIGKLSFQTYRPTKKNILVIGPVPGQKYSEITFPILSPNPATNKDAYFLKYPIYVGGNRGRGQIYPDGNKSNNTVYNATSAGIVSKIIRKEKGGYEITITDASNGREVVDIIPPGPELRVSEGQSIKLDQPLTSNPNVGGFGQADAEIVLQDPLRVQGLLFFLASVVL 812 AYP +AQQ ++NPREATG+IVCANCHLA K EVPQ+VLPD+VF+AVV+IPY ++ ++G L VGAV++LP+GF+LAP DR S E+KE+ + F Y K+NIL++GP+PG EI FPILSP+PAT+ F KY I+VGGNRGRGQI P G K+NN + AT AG ++ I + G +I + +G+ + + IP GP L V ++ PLTS+PN GGFGQ D E+VLQ+P+R+ GLL F +V L Sbjct: 27 AYPFWAQQNYDNPREATGKIVCANCHLAQKTTQAEVPQSVLPDSVFKAVVKIPYKKDTTEISSDGSDVPLQVGAVVMLPDGFKLAPQDRWSEEIKEETKGVFFTQYSEEKENILLVGPLPGDNNKEIVFPILSPDPATDSSIQFGKYSIHVGGNRGRGQILPTGEKTNNNAFTATEAGTITSIKAGKNGESDIKL-KTDSGKVISETIPAGPTLLVKVDDKVEAGAPLTSDPNSGGFGQLDTEVVLQNPVRIYGLLAFFVAVSL 289
BLAST of CK936576 vs. ExPASy Swiss-Prot
Match: CYF_CYAME (Apocytochrome f OS=Cyanidioschyzon merolae GN=petA PE=3 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 2.003e-73 Identity = 140/264 (53.03%), Postives = 178/264 (67.42%), Query Frame = 3 Query: 21 AYPIFAQQGFENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGALNVGAVLILPEGFELAPPDRISPEMKEKIGKLSFQTYRPTKKNILVIGPVPGQKYSEITFPILSPNPATNKDAYFLKYPIYVGGNRGRGQIYPDGNKSNNTVYNATSAGIVSKIIRKEKGGYEITITDASNGREVVDIIPPGPELRVSEGQSIKLDQPLTSNPNVGGFGQADAEIVLQDPLRVQGLLFFLASVVL 812 AYPI+AQQ + NPRE TGRIVCANCHLA K +++EVP +VLP+ FEA V+I YD+ KQ+L NG+KG LNVGAVLILPEGF L+P R SP F TY N++VIGPVPG+KY EI FP+ +P+P TNK +F+KY IY GGNRGRGQ+YP+G KSNN A+ G++ +I E + G V IP G L V +GQ I+ +QPLT +PNVGGFGQA+ EIVLQ+P R++ + F +V + Sbjct: 32 AYPIYAQQAYANPREVTGRIVCANCHLAQKAIELEVPNSVLPNQEFEATVKIDYDLNQKQLLGNGQKGGLNVGAVLILPEGFRLSPNSR-SP---------FFNTYSEQLPNVIVIGPVPGEKYREIHFPLKAPDPTTNKQVHFVKYSIYAGGNRGRGQLYPNGQKSNNAPVLASVNGVIEQIRENE------VVIKTDQGDLVSQAIPAGHTLLVKQGQKIQNEQPLTMDPNVGGFGQAEKEIVLQNPTRLKTFIAFCVTVFI 279
BLAST of CK936576 vs. ExPASy Swiss-Prot
Match: CYF_THAPS (Apocytochrome f OS=Thalassiosira pseudonana GN=petA PE=3 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.073e-70 Identity = 127/266 (47.74%), Postives = 178/266 (66.92%), Query Frame = 3 Query: 15 SNAYPIFAQQGFENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGALNVGAVLILPEGFELAPPDRISPEMKEKIGKLSFQTYRPTKKNILVIGPVPGQKYSEITFPILSPNPATNKDAYFLKYPIYVGGNRGRGQIYPDGNKSNNTVYNATSAGIVSKIIRKEKGGYEITITDASNGREVVDIIPPGPELRVSEGQSIKLDQPLTSNPNVGGFGQADAEIVLQDPLRVQGLLFFLASVVL 812 S+AYP+FAQQG+ NPR A G++ CANCHL K ++IE PQ VLP++VFE +++PYD+ +Q+ A+GK LNVG +LILP+GF+LA +ISPE+K K + Y NILV+GP+ G+ + E+ FP+++P+P N D +L YP Y GGNRGRGQ+YP G +SN + AT G +++I EKG +ITI + S+G + G +L V +G +K DQPL +PNVGGFGQ ++EIVLQ R+ G L F ++L Sbjct: 28 SSAYPVFAQQGYSNPRAANGKLACANCHLNQKAIEIEAPQGVLPNSVFEIEIKVPYDVNRQQISADGKPADLNVGGILILPKGFKLASKTQISPEVKAKNKGVFISPYSTEFDNILVVGPIAGKTHQELIFPVVAPDPENNPDVKYLTYPFYAGGNRGRGQVYPTGERSNINSFGATQGGQITEITTTEKGESKITIVN-SDGATTSQTLSAGLKLLVKQGDIVKQDQPLNIDPNVGGFGQEESEIVLQSSSRILGYLAFCFCLLL 292
BLAST of CK936576 vs. ExPASy Swiss-Prot
Match: CYF_PROMT (Apocytochrome f OS=Prochlorococcus marinus (strain NATL2A) GN=petA PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 1.029e-69 Identity = 130/264 (49.24%), Postives = 178/264 (67.42%), Query Frame = 3 Query: 21 AYPIFAQQGFENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGALNVGAVLILPEGFELAPPDRISPEMKEKIGKLSFQTYRPTKKNILVIGPVPGQKYSEITFPILSPNPATNKDAYFLKYPIYVGGNRGRGQIYPDGNKSNNTVYNATSAGIVSKIIRKEKGGYEITITDASNGREVVDIIPPGPELRVSEGQSIKLDQPLTSNPNVGGFGQADAEIVLQDPLRVQGLLFFLASVVL 812 AYP +AQQ FENPREATG+IVCANCH+A+ P EVPQAV D+VF+ VV IPY L+++ A+G K L VGAV++LP+GF+LAP +R + E+KE+ + F Y ++NI+++GP+PG + EI FP+LSP+P + + F KY I+VGGNRGRGQ+YP G KSNN ++ AT++G ++ I E G I + + G + +P G L + EG +I+ LT +PNVGGFGQ D EIVLQ RV G++ F V L Sbjct: 38 AYPFWAQQKFENPREATGKIVCANCHVASMPTRAEVPQAVAADSVFKTVVEIPYKKDLQEIGADGSKVPLQVGAVVMLPDGFKLAPQERWTDEIKEETQGVYFTQYSEEQENIILVGPLPGDQNREIVFPVLSPDPRKDSNYNFGKYSIHVGGNRGRGQVYPTGEKSNNNLFTATNSGTITSIETNEDGSQIINLNN-EEGESFTENLPAGTSLLIKEGDTIEKGAKLTEDPNVGGFGQLDKEIVLQSKARVIGMIIFFIGVGL 300
BLAST of CK936576 vs. ExPASy Swiss-Prot
Match: CYF_PROM1 (Apocytochrome f OS=Prochlorococcus marinus (strain NATL1A) GN=petA PE=3 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.755e-69 Identity = 130/264 (49.24%), Postives = 178/264 (67.42%), Query Frame = 3 Query: 21 AYPIFAQQGFENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGALNVGAVLILPEGFELAPPDRISPEMKEKIGKLSFQTYRPTKKNILVIGPVPGQKYSEITFPILSPNPATNKDAYFLKYPIYVGGNRGRGQIYPDGNKSNNTVYNATSAGIVSKIIRKEKGGYEITITDASNGREVVDIIPPGPELRVSEGQSIKLDQPLTSNPNVGGFGQADAEIVLQDPLRVQGLLFFLASVVL 812 AYP +AQQ FENPREATG+IVCANCH+A+ P EVPQAV D+VF+ VV IPY L+++ A+G K L VGAV++LP+GF+LAP +R + E+KE+ + F Y ++NI+++GP+PG + EI FP+LSP+P + + F KY I+VGGNRGRGQ+YP G KSNN ++ AT++G ++ I E G I + + G + +P G L + EG +I+ LT +PNVGGFGQ D EIVLQ RV G++ F V L Sbjct: 38 AYPFWAQQKFENPREATGKIVCANCHVASMPTRAEVPQAVAADSVFKTVVEIPYKKDLQEIGADGSKVPLQVGAVVMLPDGFKLAPQERWTDEIKEETQGVYFTQYSEEQENIILVGPLPGDQNREIVFPVLSPDPRKDSNYNFGKYSIHVGGNRGRGQVYPTGEKSNNNLFTATNSGTITSIETNEDGTQIINLNN-EEGESFTENLPAGTSLLIKEGDTIEKGAKLTEDPNVGGFGQLDKEIVLQSKARVIGMIIFFIGVGL 300
BLAST of CK936576 vs. ExPASy Swiss-Prot
Match: CYF_SYNJA (Apocytochrome f OS=Synechococcus sp. (strain JA-3-3Ab) GN=petA PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 7.371e-68 Identity = 128/289 (44.29%), Postives = 184/289 (63.67%), Query Frame = 3 Query: 3 GASISNAYPIFAQQGFENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGALNVGAVLILPEGFELAPPDRISPEMKEKIGKLSFQTYRPTKKNILVIGPVPGQKYSEITFPILSPNPATNKDAYFLKYPIYVGGNRGRGQIYPDGNKSNNTVYNATSAGIVSKIIRKEKG-------------------GYEITITDASNGREVVDIIPPGPELRVSEGQSIKLDQPLTSNPNVGGFGQADAEIVLQDPLRVQGLLFFLASVVL 812 G+ + AYP +AQ ++NPREATG+IVCANCHL P EVPQAV P VF V IPYD+ +QVLA+G KG LNVGAV++LPEGF LA + ++ E +++ + Y K NIL++GP+PG+++ EI FP+++P+P + F+KY +Y+G NRGRGQI PDG+ SNN V+ A + G ++ I E G + + G + + ++PPGPEL V+ G S++ P+T+NPNVGGFGQ + ++VLQ+P RV+ L+ FLA+V + Sbjct: 18 GSRPAAAYPYYAQMAYDNPREATGKIVCANCHLNAMPARAEVPQAVTPGQVFTIKVGIPYDLSKQQVLADGSKGGLNVGAVVVLPEGFRLATEEEMTEEQRQETAETYITPYSDEKPNILLVGPLPGEQHQEIVFPVVAPDPKEDPSVAFMKYRVYIGANRGRGQINPDGSLSNNNVFRAPATGRLTSIATIESDLSDLPPELAALVPPEYELPGTRVLSFETEGGLKHL-VVPPGPELVVNIGDSVQEGDPVTNNPNVGGFGQVERDLVLQNPERVKWLVAFLAAVAI 305
BLAST of CK936576 vs. ExPASy Swiss-Prot
Match: CYF_SYNJB (Apocytochrome f OS=Synechococcus sp. GN=petA PE=3 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.642e-67 Identity = 129/288 (44.79%), Postives = 182/288 (63.19%), Query Frame = 3 Query: 3 GASISNAYPIFAQQGFENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGALNVGAVLILPEGFELAPPDRISPEMKEKIGKLSFQTYRPTKKNILVIGPVPGQKYSEITFPILSPNPATNKDAYFLKYPIYVGGNRGRGQIYPDGNKSNNTVYNATSAGIVSKIIRKEKGGYEITITDAS--------NGREVVD----------IIPPGPELRVSEGQSIKLDQPLTSNPNVGGFGQADAEIVLQDPLRVQGLLFFLASVVL 812 GA + AYP +AQ ++NPREATG+IVCANCHL P EVPQAV P VF V IPYD+ +QVLA+G KG LNVGAV++LPEGF LA ++ E +++ + Y K NIL++GP+PG+++ EI FP+++P+P + F+KY +Y+G NRGRGQ+ PDG+ SNN V+ A + G + I + ++ AS G V+ ++PPGPEL V+ G S+K P+T+NPNVGGFGQ + ++VLQ P RV+ L+ FLA++ + Sbjct: 18 GARPAAAYPYYAQMAYDNPREATGKIVCANCHLNAMPTRAEVPQAVTPGQVFTIKVGIPYDLSKQQVLADGSKGGLNVGAVVVLPEGFRLATEAEMTEEQRQETAETYITPYSDAKPNILLVGPLPGEQHQEIVFPVVAPDPKEDPSVAFMKYRVYIGANRGRGQLNPDGSLSNNNVFRAPATGRLVNIATLDSDISDLPAELASLVPPEYELPGTRVLSFESESGIHNLVVPPGPELVVAVGDSVKEGDPVTNNPNVGGFGQVERDLVLQSPDRVKWLVAFLAAITI 305
BLAST of CK936576 vs. ExPASy Swiss-Prot
Match: CYF_EUGGR (Apocytochrome f, chloroplastic OS=Euglena gracilis GN=petA PE=1 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 7.894e-62 Identity = 121/232 (52.16%), Postives = 155/232 (66.81%), Query Frame = 3 Query: 114 VDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGALNVGAVLILPEGFELAPPDRISPEMKEKIGKLSFQTYRPTKKNILVIGPVPGQKYSEITFPILSPNPATNKDAYFLKYPIYVGGNRGRGQIYPDGNKSNNTVYNATSAGIVSKIIRKEKGGYEITITDASNGREVVDIIPPGPELRVSEGQSIKLDQPLTSNPNVGGFGQADAEIVLQDPLRVQGLLFFLASVV 809 VDI P PDTVF+A +++PYD LKQV NG+ LNVGAVLILPEGF LAPP+RI +MKE+I L F Y NILV+GPVPG+KY+E+T +LSP+P +K A F PIYVGGNRGRGQ+YP G KSNN +YN +G ++ I EK +G + + +P G EL V G ++ Q +++NPNVGGFGQA++EIVLQ+P RVQ LFF +V+ Sbjct: 244 VDIATPGT--PDTVFKATIKVPYDESLKQVAGNGRAAPLNVGAVLILPEGFRLAPPERIPEKMKEEINGLQFIQYSKDTPNILVVGPVPGKKYAEMTVALLSPDPRVDKKAEFGTLPIYVGGNRGRGQLYPTGEKSNNNIYNVEHSGKIADIQLNEKKRIYTVAVQQKDGEIINEDLPAGAELIVKVGDVVEAGQAISTNPNVGGFGQAESEIVLQNPGRVQAFLFFSFTVL 473 HSP 2 Score: 100.523 bits (249), Expect = 1.153e-20 Identity = 45/59 (76.27%), Postives = 52/59 (88.14%), Query Frame = 3 Query: 6 ASISNAYPIFAQQGFENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVVRIPY 182 A +NAYPIFAQQ + NPREATGRIVCANCHLA+KP +IEVPQAVLPD VFEAV ++P+ Sbjct: 144 AGSANAYPIFAQQAYGNPREATGRIVCANCHLASKPTEIEVPQAVLPDQVFEAVTKVPF 202
BLAST of CK936576 vs. ExPASy Swiss-Prot
Match: CYF_GLOVI (Apocytochrome f OS=Gloeobacter violaceus GN=petA PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 6.058e-54 Identity = 124/292 (42.47%), Postives = 168/292 (57.53%), Query Frame = 3 Query: 21 AYPIFAQQGFENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGALNVGAVLILPEGFELAPPDRISPEMKEKIGKLSFQT----YRPTKKNILVIGPVPGQKY--SEITFPILSPNP-ATNKDAYFLKYPIYVGGNRGRGQIYPDGNKSNNTVYNATSAGIVSKIIR-------------------KEKGGYEITITDASNGREVVDIIPPGPEL--RVSEGQSIKLDQPLTSNPNVGGFGQADAEIVLQDPLRVQGLLFFLASVVL 812 A+P FA G+E RE++G+IVCANCHLA KP +IEVPQ+VLP VF+ + +PYD +++QV A+G + +GA + LPEGF +A S E KE I K T +P + NIL+I + G E P+ P+P A + F KY +YVG NRGRGQ+Y +G SN YNA AG +S + + G +TITD +V+ IPPGP+L V +G IK QPLT++PNVGG+GQ + +IVLQDP RV L+ FLA+ + Sbjct: 28 AWPSFAA-GYEEARESSGKIVCANCHLAVKPTEIEVPQSVLPGKVFDLKIHVPYDTKIQQVGADGSPAPMQIGAYIQLPEGFTVADEKEWSAEAKESIEKYGGVTPLYADKPERSNILIINQIDGSTVPGQEFIVPVKPPDPNAKDAKVNFGKYGVYVGANRGRGQVYSNGVASNTAQYNAPVAGTISAVQTGVTFTDKLQYGLGTEATDFEYTNGTRVTITDEKGKASIVN-IPPGPKLLDTVKQGAQIKAGQPLTNDPNVGGYGQEERDIVLQDPQRVTWLVAFLAAAFI 317 The following BLAST results are available for this feature:
BLAST of CK936576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936576 ID=CK936576; Name=CK936576; organism=Citrus sinensis; type=EST; length=813bpback to top |