CN186808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186808 vs. ExPASy Swiss-Prot
Match: IF1A_SULIA (Translation initiation factor 1A OS=Sulfolobus islandicus (strain M.16.27) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.286e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 115 RELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 354 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CN186808 vs. ExPASy Swiss-Prot
Match: IF1A_METKA (Translation initiation factor 1A OS=Methanopyrus kandleri GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.286e-12 Identity = 34/92 (36.96%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 103 DDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE 378 D+ +++ ++G+ + V +MLGN R + C+DG R+ I GKM K+VWI GD++LV ++Q ++ADV +Y + LK G+L E Sbjct: 7 DETLKKIRLPKEGEIFGVVEKMLGNDRVQVRCVDGKTRVARIPGKMRKRVWIREGDVVLVKPWEFQPERADVTWRYTRVQVDWLKRKGKLDE 98
BLAST of CN186808 vs. ExPASy Swiss-Prot
Match: IF1A_SULSO (Translation initiation factor 1A OS=Sulfolobus solfataricus GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 115 RELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 354 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPRPEEGQTICVVKKMLGGDHLIVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CN186808 vs. ExPASy Swiss-Prot
Match: IF1A_HALS3 (Translation initiation factor 1A OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12 Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 1 Query: 112 KRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGEL 372 ++ L ED + +A+V MLG R + C DG +R I G+M K++WI DI+LV D+QDDKADV +Y +A L+ G + Sbjct: 8 RKNLRMPEDDEVFAEVTDMLGANRVQVRCADGEERTARIPGRMQKRIWIREDDIVLVEPWDWQDDKADVTWRYEKSDADQLREEGHI 94
BLAST of CN186808 vs. ExPASy Swiss-Prot
Match: IF1A1_HALSA (Translation initiation factor 1A 1 OS=Halobacterium salinarium GN=eIF1A1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12 Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 1 Query: 112 KRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGEL 372 ++ L ED + +A+V MLG R + C DG +R I G+M K++WI DI+LV D+QDDKADV +Y +A L+ G + Sbjct: 8 RKNLRMPEDDEVFAEVTDMLGANRVQVRCADGEERTARIPGRMQKRIWIREDDIVLVEPWDWQDDKADVTWRYEKSDADQLREEGHI 94
BLAST of CN186808 vs. ExPASy Swiss-Prot
Match: IF1A_PICTO (Translation initiation factor 1A OS=Picrophilus torridus GN=eif1a PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.481e-11 Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 130 KEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE 378 K+ G+ Y V +M G R MC DG R C I GKM K++WI GD+++V ++QD+K D+I +Y +A L LPE Sbjct: 17 KKSGEIYGIVEKMSGASRLIVMCEDGVTRNCRIPGKMKKRMWIREGDLVIVKPWEFQDEKGDIIYRYTKTQAAYLSRNHMLPE 99
BLAST of CN186808 vs. ExPASy Swiss-Prot
Match: IF1A1_HALWD (Translation initiation factor 1A 1 OS=Haloquadratum walsbyi (strain DSM 16790) GN=eif1a1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.935e-11 Identity = 35/94 (37.23%), Postives = 52/94 (55.32%), Query Frame = 1 Query: 100 ADDEKR---ELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGEL 372 +DDE R +L +D + +A V MLG R C DG +R I G+M K++WI D++LV D+QD+K D+ +Y EA L+ G + Sbjct: 2 SDDENRGSHDLRMPDDDEVFAVVTNMLGANRVTVRCADGNERTARIPGRMQKRIWIREDDVVLVEPWDWQDEKGDITWRYEKSEADQLREEGRI 95
BLAST of CN186808 vs. ExPASy Swiss-Prot
Match: IF1A_METLZ (Translation initiation factor 1A OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=eIF1A PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11 Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 142 QEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAY 363 +++AQ MLG+ C DG RL I+GK+ K+VWI GDI++V D+QDDK D+I +Y + L+A+ Sbjct: 29 EQFAQAELMLGSNHIRVRCSDGVTRLGRIKGKIKKRVWIREGDILIVVPWDFQDDKCDIIYRYTTPQVDWLRAH 102
BLAST of CN186808 vs. ExPASy Swiss-Prot
Match: IF1A_DESK1 (Translation initiation factor 1A OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=eIF1A PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11 Identity = 34/82 (41.46%), Postives = 47/82 (57.32%), Query Frame = 1 Query: 133 EDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE 378 ++G V+R LG A C+DG R I GK+ +KVWI GDIILVGL D+ +K +V+ KY +E L G +P+ Sbjct: 25 DEGTIICGVVRHLGGDYLIAKCLDGVDRKIRIPGKLRRKVWITEGDIILVGLWDFSSEKGEVVYKYGKNEVNKLVEKGVVPK 106 The following BLAST results are available for this feature:
BLAST of CN186808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186808 ID=CN186808; Name=CN186808; organism=Citrus sinensis; type=EST; length=754bpback to top |