CK936530

Overview
NameCK936530
Unique NameCK936530
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.502e-68
Identity = 128/213 (60.09%), Postives = 143/213 (67.14%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MG ++ ER   GWAA+DPSGILSPYTYTLR TG EDV I+++ CGICHTD+HQ KNDLGMSNYPM                 S F             CC    PCE D+EQYC KKIWSYNDVY +G+PTQGGFA++ VV QKFVVKIP+GMA+EQAAPLLCAGVTV+SPLSHFGLKQ                    AKAMGHHVTVISSS
Sbjct:    1 MGIMEAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSS 213          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 5.707e-68
Identity = 128/213 (60.09%), Postives = 142/213 (66.67%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGSL +ER  +GWAA+D +G LSPY+YTLRNTG EDV +KVLYCGICHTDIHQ KN LG S YPM                 + +             CCR   PC+A+VEQYCNKKIWSYNDVYTDG+PTQGGFA +MVVDQKFVVKIP G+A EQAAPLLCAGVTV+SPL HFGL                      AKAMGHHVTVISSS
Sbjct:    1 MGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVAKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNPGLRGGILGLGGVGHMGVKVAKAMGHHVTVISSS 213          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.699e-67
Identity = 129/214 (60.28%), Postives = 143/214 (66.82%), Query Frame = 2
Query:   59 MGSLD-TERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGS+D +E+   GWAA+D +G LSPYTY LR TGAEDV +KVLYCGICHTD+HQ KN LG S YPM                 S +             CCR+ RPC+A+VEQYCNKKIWSYNDVYTDGKPTQGGFA SMVVDQKFVVKIP G+A EQAAPLLCAGVTV+SPL HFGL                      AK+MGHHVTVISSS
Sbjct:    1 MGSVDASEKTITGWAARDATGHLSPYTYNLRRTGAEDVVLKVLYCGICHTDLHQTKNHLGASKYPMVPGHEVVGEVVEVGPEVSKYSVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGKPTQGGFAGSMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLMTPGLRGGILGLGGVGHMGVKVAKSMGHHVTVISSS 214          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.406e-66
Identity = 126/213 (59.15%), Postives = 144/213 (67.61%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGSL+ ER   GWAA+DPSG+LSPYTY+LRNTG ED+YIKVL CGICH+DIHQIKNDLGMS+YPM                 + +             CCR+  PC +D EQYCNKKIW+YNDVYTDGKPTQGGFA  +VV Q+FVVKIPDG+  EQ A ++CAGVTV+SPL  FGLKQS                   AKAMGHHVTVISSS
Sbjct:    1 MGSLEKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCGPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGQRFVVKIPDGLESEQDA-VMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSS 212          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 3.132e-66
Identity = 125/213 (58.69%), Postives = 142/213 (66.67%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGSL +ER  +GWAA+D +G L+PYTYTLR+TG EDV +KVLYCGICHTDIHQ KN LG S YPM                 + +             CCR  +PC+A+VEQYCNKKIWSYNDVYTDG+PTQGGFA +MVVDQKFV+KIP G+A EQAAPLLCAGVTV+SPL  FGL                      AKAMGHHVTVISSS
Sbjct:    1 MGSLASERKVVGWAARDATGHLAPYTYTLRSTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYGVGDVVGVGVIVGCCRECKPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVMKIPAGLAPEQAAPLLCAGVTVYSPLKAFGLTTPGLRGAILGLGGVGHMGVKVAKAMGHHVTVISSS 213          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.190e-65
Identity = 123/213 (57.75%), Postives = 138/213 (64.79%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGSL  E+   GWAA+D SG L+PY YTLR TG EDV +KVLYCGICHTDIHQ KN LG S YPM                 + +             CCR   PC+A+VEQYCNK+IWSYNDVYTDG+PTQGGFA +MVVDQKFVVKIP G+A EQAAPLLCAG+TV+SPL HFGL                      AK+MGHHVTVISSS
Sbjct:    1 MGSLAAEKTVTGWAARDASGHLTPYNYTLRKTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYSAGDVVGVGVIVGCCRECHPCKANVEQYCNKRIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGLMSPGLRGGVLGLGGVGHMGVKVAKSMGHHVTVISSS 213          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.010e-56
Identity = 109/213 (51.17%), Postives = 133/213 (62.44%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGSL++ER   G+AA+D SG LSPYTYTLRN G EDV ++V+YCGICH+D+ Q+ N++GMSNYPM                   F              CR+   C   +EQYC+K+IW+YNDV  DG PTQGGFA SMVVDQ FVV+IP+ + LEQAAPLLCAGVTV+SP+ HFG+ +                    AKA G HVTVISSS
Sbjct:    1 MGSLESERTVTGYAARDSSGHLSPYTYTLRNKGPEDVIVRVIYCGICHSDLVQMHNEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSS 213          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.249e-56
Identity = 108/213 (50.70%), Postives = 133/213 (62.44%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGSL++E+   G+AA+D SG LSPYTYTLRN G EDV ++V+YCGICH+D+ Q+ N++GMSNYPM                   F              CR+   C   +EQYC+K+IW+YNDV  DG PTQGGFA SMVVDQ FVV+IP+ + LEQAAPLLCAGVTV+SP+ HFG+ +                    AKA G HVTVISSS
Sbjct:    1 MGSLESEKTVTGYAARDSSGHLSPYTYTLRNKGPEDVIVRVIYCGICHSDLVQMHNEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSS 213          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.242e-55
Identity = 107/213 (50.23%), Postives = 131/213 (61.50%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGSL+TE+   G+AA+D SG LSPYTY LR  G EDV +KV+YCGICH+D+ Q++N++GMS+YPM                   F              CR+   C   +EQYC+K+IW+YNDV  DG PTQGGFA SMVVDQ FVV+IP+ + LEQAAPLLCAGVTVFSP+ HF + +                    AKA G HVTVISSS
Sbjct:    1 MGSLETEKTVTGYAARDSSGHLSPYTYNLRKKGPEDVIVKVIYCGICHSDLVQMRNEMGMSHYPMVPGHEVVGIVTEIGSEVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSS 213          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.234e-54
Identity = 106/213 (49.77%), Postives = 131/213 (61.50%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGSL++E+   G+AA+D SG LSPYTY LR  G EDV +KV+YCGICH+D+ Q++N++GMS+YPM                   F              CR+   C   +EQYC+K+IW+YNDV  DG PTQGGFA SMVVDQ FVV+IP+ + LEQAAPLLCAGVTVFSP+ HF + +                    AKA G HVTVISSS
Sbjct:    1 MGSLESEKTVTGYAARDSSGHLSPYTYNLRKKGPEDVIVKVIYCGICHSDLVQMRNEMGMSHYPMVPGHEVVGIVTEIGSEVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGKKCGILGLGGVGHLGVKIAKAFGLHVTVISSS 213          
The following BLAST results are available for this feature:
BLAST of CK936530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
CADH5_ARATH1.502e-6860.09Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH_MAIZE5.707e-6860.09Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
CADH_LOLPR3.699e-6760.28Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH_EUCBO1.406e-6659.15Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH_SACOF3.132e-6658.69Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH2_ORYSJ1.190e-6557.75Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]
CADH7_PICAB1.010e-5651.17Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH2_PICAB2.249e-5650.70Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
CADH_PINRA4.242e-5550.23Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH_PINTA1.234e-5449.77Probable cinnamyl alcohol dehydrogenase OS=Pinus t... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004521_D03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936530 ID=CK936530; Name=CK936530; organism=Citrus sinensis; type=EST; length=697bp
GCGGGGACAAAACAAAACTTCACATAACTCANNNGCTAAAACGAAAAANN
NACAAAAAATGGGAAGCCTTGATACCGAGAGAGCAGCGATGGGGTGGGCT
GCAAAGGATCCATCTGGGATTCTGTCACCTTACACTTACACTCTCAGAAA
CACAGGAGCAGAAGATGTTTACATTAAGGTTCTTTACTGTGGAATCTGCC
ACACTGATATTCATCAAATAAAAAATGATCTGGGCATGTCTAACTATCCG
ATGGTTCCAGGACATGAGGTGGTGGGTGAAGTGAAGGAAGTGGGTTCAGA
AGTGAGCAACTTTAAAGTAGGAGATAAGGTTGGTGTTGGGGTTCTCGTTG
GTTGTTGCAGAAACCGCAGGCCGTGCGAGGCAGATGTTGAGCAGTACTGC
AATAAGAAAATCTGGTCCTATAACGATGTTTACACCGATGGCAAGCCTAC
ACAAGGCGGCTTTGCTGAGTCCATGGTCGTTGATCAAAAGTTTGTGGTGA
AAATACCAGATGGGATGGCACTGGAGCAGGCGGCACCGCTATTGTGTGCT
GGTGTGACAGTGTTCAGTCCCCTGAGCCACTTTGGATTGAAGCAGAGCGG
GCTGAGAGGAGGAATCTTGGGGCTCGGAGGAGTAGGTCACATGGGGGTTT
TGATAGCTAAGGCGATGGGACACCATGTTACTGTGATTAGCTCTTCT
back to top