CK936530

Overview
NameCK936530
Unique NameCK936530
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.785e-33
Identity = 72/193 (37.31%), Postives = 99/193 (51.30%), Query Frame = 2
Query:  119 ILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            ILSP+ ++ R TG  DV  KVLYCG+CH+D+H +KN+ GM+ YP+                   F              C +   C+ D E  C K++ +Y     DG  T GG+A+SMV DQ FV++ P+ + L+  APLLCAG+T +SPL + GL +                    AKA G HVTVIS+S
Sbjct:    1 ILSPFKFSRRATGDNDVRFKVLYCGVCHSDLHMVKNEWGMTTYPIVPGHEIVGRVTEVGSKVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYAFTNVDGSITYGGYADSMVADQHFVLRWPENLPLDSGAPLLCAGITTYSPLRYHGLDKPGTKVGVVGLGGLGHVAVKMAKAFGAHVTVISTS 193          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.958e-32
Identity = 76/207 (36.71%), Postives = 107/207 (51.69%), Query Frame = 2
Query:   80 RAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQ-AAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            R A GWAA+D SG+LSP+ ++ R+ G EDV ++VLYCGICHTD+H  KND G S YP                    +              CR+ + C  ++E YC K I +  D + DG  T GG+++SMVVD+ FV +IP+G+ L+   +  LC G +  SPL ++GL +                    AK  G  +TVIS+S
Sbjct:   12 RKAFGWAARDSSGLLSPFNFSRRDIGEEDVALEVLYCGICHTDLHMAKNDFGNSIYPYVPGHEVIGIVAEVGSKVEKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKHILTQGDKHIDGTTTYGGYSDSMVVDEHFVTRIPEGLPLDGCGSSSLCWGYS-HSPLKYYGLDKPGLHVGVVGLGGLGHMVAKFAKTHGLKITVISTS 217          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32
Identity = 76/208 (36.54%), Postives = 103/208 (49.52%), Query Frame = 2
Query:   92 GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG------MALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            GWAA+D +G+LSP++Y LR  G EDV +K+L+CGICH+D+  IKN+ G + YP+                 + F              CR    C    E YC   + S+N    DG    GGF+E  VV+Q++VV+IP G        L++ APLLCAGVTV+ P+   GL +                     KA G  VTVIS+S
Sbjct:   10 GWAARDANGLLSPFSYPLRAKGDEDVVVKILFCGICHSDLSTIKNEWGNAKYPVVPGHEIVGVVAEVGSSVARFAAGDTVGVGYIASTCRACANCRDGFENYCAGLVPSFNAALPDGATVHGGFSELAVVNQRYVVRIPGGGGGASPAPLDRLAPLLCAGVTVYCPMRRLGLDRPGVHLGVAGLGGLGHLAVKFGKAFGVKVTVISTS 217          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29
Identity = 76/215 (35.35%), Postives = 106/215 (49.30%), Query Frame = 2
Query:   80 RAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCN-KKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD--------GMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            R A+G AA D SG L+P   + R TG +DV IKVLYCGICH+D+H IKN+   + YP+                 + F              C     C    E YC+   +++YN V  DG  T GG+++++VV Q+FVV+ P          + L+  APLLCAGVTV++P+   GL ++                   A+A G  VTVIS+S
Sbjct:   21 RKAVGLAAHDDSGHLTPIRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVVFTYNSVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQHGLCEAGKHVGVVGLGGLGHVAVKFARAFGMRVTVISTS 235          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.519e-28
Identity = 64/201 (31.84%), Postives = 99/201 (49.25%), Query Frame = 2
Query:   95 WAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            WAA+DPSGILSPY +  R   +EDV +++ +CG+C+ D+   +N    S YP+                   F              C++   C + +E +C+K + +YN V +DG  T+GG++  ++V Q++  KIP    L +AAPLLCAG+TV++P+    + Q                     KA G  VTV S+S
Sbjct:   13 WAARDPSGILSPYKFNRREVQSEDVSLRITHCGVCYADVIWTRNMFNDSIYPLVPGHEIAGVVTEVGADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTS 213          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.385e-28
Identity = 67/211 (31.75%), Postives = 98/211 (46.45%), Query Frame = 2
Query:   65 SLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            S   E   M WAA+DPSG+LSP+T T R+   +DV + + +CG+C+ D+   +N  G S YP+                   F              CR    C    E  C K ++++N +  DG  T+GG++  +VV +++  KIP    LE AAPLLCAG+TV++P+    + Q                     KA G  VTV S+S
Sbjct:    4 SESVENECMCWAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTS 214          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.774e-28
Identity = 69/202 (34.16%), Postives = 102/202 (50.50%), Query Frame = 2
Query:   95 WAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKI-WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            +AA   +  L+  T T R+ G  DV I + + GICH+DIH +K + G  NYP+                 + +              CR    C   +EQYC     ++YN +  DG+PTQGG++E++VVD+ +V++IPD + L+ AAPLLCAG+T++SPL H+    +                   A AMG  VTV+S S
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAGANTRVAIIGLGGLGHMGVKLGA-AMGADVTVLSQS 207          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.774e-28
Identity = 69/202 (34.16%), Postives = 102/202 (50.50%), Query Frame = 2
Query:   95 WAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKI-WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            +AA   +  L+  T T R+ G  DV I + + GICH+DIH +K + G  NYP+                 + +              CR    C   +EQYC     ++YN +  DG+PTQGG++E++VVD+ +V++IPD + L+ AAPLLCAG+T++SPL H+    +                   A AMG  VTV+S S
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAGANTRVAIIGLGGLGHMGVKLGA-AMGADVTVLSQS 207          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.684e-19
Identity = 59/189 (31.22%), Postives = 84/189 (44.44%), Query Frame = 2
Query:  134 TYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKI-WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            T   R     DV I + + GICH+DIH   ++ G   +PM                 +                C     C    EQ+C K +  +YN V  DG PT GG+++ +VV  +FVV+IPD + ++ A+PLLCAG+T +SPL H+ +                      A AMG  VTV+S S
Sbjct:   23 TIERRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNVGPG-KKVAIVGVGGLGHLAIQFAHAMGAEVTVLSRS 210          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18
Identity = 51/170 (30.00%), Postives = 82/170 (48.24%), Query Frame = 2
Query:   80 RAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGK-PTQGGFAESMVVDQKFVVKIPDGM-ALEQAAPLLCAGVTVFSPLSHF 583
            +A   ++AK P   L P   T R  G  DV I++ YCG+CH+D+HQ++++   + YP                    +              C++   CE  +E YC+    +YN    D    T GG+++ +VV +++V++I      L   APLLCAG+T +SPL H+
Sbjct:    4 KAVGAYSAKQP---LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHW 170          
The following BLAST results are available for this feature:
BLAST of CK936530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
MTDH_PETCR7.785e-3337.31Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
MTDH3_STYHU2.958e-3236.71Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
CADH9_ORYSJ3.864e-3236.54Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CADH7_ORYSJ1.795e-2935.35Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CADH4_ORYSJ1.519e-2831.84Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
CADH1_ARATH3.385e-2831.75Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHC_MYCTU5.774e-2834.16NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO5.774e-2834.16NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHA_BACSU1.684e-1931.22Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
YAHK_ECOLI1.091e-1830.00Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_D03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936530 ID=CK936530; Name=CK936530; organism=Citrus sinensis; type=EST; length=697bp
GCGGGGACAAAACAAAACTTCACATAACTCANNNGCTAAAACGAAAAANN
NACAAAAAATGGGAAGCCTTGATACCGAGAGAGCAGCGATGGGGTGGGCT
GCAAAGGATCCATCTGGGATTCTGTCACCTTACACTTACACTCTCAGAAA
CACAGGAGCAGAAGATGTTTACATTAAGGTTCTTTACTGTGGAATCTGCC
ACACTGATATTCATCAAATAAAAAATGATCTGGGCATGTCTAACTATCCG
ATGGTTCCAGGACATGAGGTGGTGGGTGAAGTGAAGGAAGTGGGTTCAGA
AGTGAGCAACTTTAAAGTAGGAGATAAGGTTGGTGTTGGGGTTCTCGTTG
GTTGTTGCAGAAACCGCAGGCCGTGCGAGGCAGATGTTGAGCAGTACTGC
AATAAGAAAATCTGGTCCTATAACGATGTTTACACCGATGGCAAGCCTAC
ACAAGGCGGCTTTGCTGAGTCCATGGTCGTTGATCAAAAGTTTGTGGTGA
AAATACCAGATGGGATGGCACTGGAGCAGGCGGCACCGCTATTGTGTGCT
GGTGTGACAGTGTTCAGTCCCCTGAGCCACTTTGGATTGAAGCAGAGCGG
GCTGAGAGGAGGAATCTTGGGGCTCGGAGGAGTAGGTCACATGGGGGTTT
TGATAGCTAAGGCGATGGGACACCATGTTACTGTGATTAGCTCTTCT
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