CK936530

Overview
NameCK936530
Unique NameCK936530
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: ADH6_YEAST (NADP-dependent alcohol dehydrogenase 6 OS=Saccharomyces cerevisiae GN=ADH6 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 46/142 (32.39%), Postives = 63/142 (44.37%), Query Frame = 2
Query:  164 DVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXX-SNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFG 586
            D+ IK+  CG+C +DIH      G    P+                  S                C     C+ D E YC K + +Y+  Y DG  +QGG+A  + V + FVV IP+ +    AAPLLC G+TV+SPL   G
Sbjct:   35 DIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNG 176          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: YL498_MIMIV (Probable zinc-type alcohol dehydrogenase-like protein L498 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L498 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.604e-12
Identity = 50/210 (23.81%), Postives = 83/210 (39.52%), Query Frame = 2
Query:   86 AMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYC--------NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVIS 691
            A+G+   D    +    +  +     +V I++ Y GICH+D H I  +   +++P+                   +              C + + C   +EQ+C        N+K     D+   G  T GG++  +++ Q FV K P  + +E+ APL+CAG T +SPL    +                      AKAMG HV  I+
Sbjct:   71 ALGFGVTDVGKPVELLVFDRKKPTNNEVSIEIYYTGICHSDWHFIVGEW-KADFPLIPGHELIGRVIDIGPNVDKYSIGDIVCVSPVIDSCGHCKMCTHHIEQHCMNGATEIYNQKTRLPGDIKPSGPITYGGYSNIVIIKQHFVYKFPKNLDIERCAPLMCAGATTYSPLRQAKVGPG-MKVGIVGIGGLGHIAVKIAKAMGAHVVAIT 278          
The following BLAST results are available for this feature:
BLAST of CK936530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ADH6_YEAST6.197e-1432.39NADP-dependent alcohol dehydrogenase 6 OS=Saccharo... [more]
YL498_MIMIV2.604e-1223.81Probable zinc-type alcohol dehydrogenase-like prot... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_D03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936530 ID=CK936530; Name=CK936530; organism=Citrus sinensis; type=EST; length=697bp
GCGGGGACAAAACAAAACTTCACATAACTCANNNGCTAAAACGAAAAANN
NACAAAAAATGGGAAGCCTTGATACCGAGAGAGCAGCGATGGGGTGGGCT
GCAAAGGATCCATCTGGGATTCTGTCACCTTACACTTACACTCTCAGAAA
CACAGGAGCAGAAGATGTTTACATTAAGGTTCTTTACTGTGGAATCTGCC
ACACTGATATTCATCAAATAAAAAATGATCTGGGCATGTCTAACTATCCG
ATGGTTCCAGGACATGAGGTGGTGGGTGAAGTGAAGGAAGTGGGTTCAGA
AGTGAGCAACTTTAAAGTAGGAGATAAGGTTGGTGTTGGGGTTCTCGTTG
GTTGTTGCAGAAACCGCAGGCCGTGCGAGGCAGATGTTGAGCAGTACTGC
AATAAGAAAATCTGGTCCTATAACGATGTTTACACCGATGGCAAGCCTAC
ACAAGGCGGCTTTGCTGAGTCCATGGTCGTTGATCAAAAGTTTGTGGTGA
AAATACCAGATGGGATGGCACTGGAGCAGGCGGCACCGCTATTGTGTGCT
GGTGTGACAGTGTTCAGTCCCCTGAGCCACTTTGGATTGAAGCAGAGCGG
GCTGAGAGGAGGAATCTTGGGGCTCGGAGGAGTAGGTCACATGGGGGTTT
TGATAGCTAAGGCGATGGGACACCATGTTACTGTGATTAGCTCTTCT
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