CX675148
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: ABCAA_HUMAN (ATP-binding cassette sub-family A member 10 OS=Homo sapiens GN=ABCA10 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.460e-27 Identity = 69/158 (43.67%), Postives = 103/158 (65.19%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVME--KLVE-FDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVK---PTEVSSVDLEDL 456 LELYA +KG+ + +D + +LVE L + K P TLS G KRKL ++++G+P +V+LDEP TGMDP ++ MW+++ + + + + +LTTH M+EA+A+C R+ +MV G LRCIGS QHLK +FG LE+K PT+V ++ E L Sbjct: 1302 LELYAAVKGLGK---EDAALSISRLVEALKLQEQLKAPVKTLSEGIKRKLCFVLSILGNPSVVLLDEPFTGMDPEGQQQMWQIL-QATVKNKERGTLLTTHYMSEAEAVCDRMAMMVSGTLRCIGSIQHLKNKFGRDYLLEIKMKEPTQVEALHTEIL 1455 HSP 2 Score: 92.0485 bits (227), Expect = 3.561e-18 Identity = 51/162 (31.48%), Postives = 90/162 (55.56%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEVSSVDLEDLCQIIQERVFD 486 L ++A+IKG+ ++ V ++E D+ + LSGG KRKL++ IA++GDP +++LDEP+ G+DP ++ +W S L + ++ +T M+EA L R + G+L+C GS LK ++G L + E+ D E + +I++ + D Sbjct: 490 LRVFAKIKGIQPKEVEQEVKRIIMELDMQSIQDIIAKKLSGGQKRKLTLGIAILGDPQVLLLDEPTAGLDPFSRHRVW---SLLKEHKVDRLILFSTQFMDEADILADRKVFLSNGKLKCAGSSLFLKRKWGIGYHLSLHRNEM--CDTEKITSLIKQHIPD 646
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: ABCA2_DICDI (ABC transporter A family member 2 OS=Dictyostelium discoideum GN=abcA2 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.460e-27 Identity = 64/140 (45.71%), Postives = 93/140 (66.43%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVK 420 L LY IKGV E ++ +VV + DL A + SGGNKRK S++IAM+G+P IV LDEPSTG D + ++++W V+S L+ + +ILT+HSM E +ALC R+ IM G+++C+GS QH+K++FG +VK Sbjct: 1392 LTLYCAIKGVPEDKVKEVVEAFIKMMDLGAIANSNTGGYSGGNKRKTSLSIAMLGNPSIVSLDEPSTGCDAVVRKYIWNVVSELAKDK---VIILTSHSMAEVEALCYRMTIMRDGKMKCLGSIQHIKSKFGAGYTFDVK 1528 HSP 2 Score: 102.449 bits (254), Expect = 2.635e-21 Identity = 56/132 (42.42%), Postives = 84/132 (63.64%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG 396 L++YA +KGV+ + + VE DL + + +LSGG KRKL + IA IG ++ LDE S+GMDP+++R +W+ + L ++G+T +ILTTH + EA L RI I+ G+LRC GS +LK +FG Sbjct: 581 LKIYASLKGVSPSEIQREAEKMAVEVDLGEKIHSQAGSLSGGQKRKLCLGIAFIGRSDVIFLDEVSSGMDPLSRRVVWDFL--LKYKKGRT-IILTTHYLEEADYLGDRIAIISHGKLRCDGSSLYLKNKFG 709
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: AB7A_ARATH (ABC transporter A family member 7 OS=Arabidopsis thaliana GN=ABCA7 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.460e-27 Identity = 71/186 (38.17%), Postives = 109/186 (58.60%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKH--AKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEVSSVDLEDLCQIIQ---ERVFDIPSQRRSLLDDLEVCIGGI 543 L Y R+K + ++ V E L +L A KP+ SGG KR+LSVAI++IG+P +V +DEPSTG+DP +++ +W VI R + TA+ILTTHSM EA+ LC R+GI V G L+CIG+P+ LK R+G + + ++E L + + ++++ I ++ L EV I + Sbjct: 712 LLFYGRLKNLKGADLNQAVEESLKSVNLFHGGVADKPAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKNLWTVIKR---AKQNTAIILTTHSMEEAEFLCDRLGIFVDGGLQCIGNPKELKGRYGGSYVFTMTTSSEHEQNVEKLIKDVSPNAKKIYHIAGTQKFELPKEEVRISEV 894
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: ABC8A_MOUSE (ATP-binding cassette sub-family A member 8-A OS=Mus musculus GN=Abca8a PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.213e-27 Identity = 70/154 (45.45%), Postives = 103/154 (66.88%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVE-FDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGN--FLELEVK-PTEVSSVDLE 450 LE++A IKG+ + + V +E+L + L K P TLS G KRKL ++++G+P +V+LDEPSTGMDP ++ MW+ I + + A +LTTH M EA+A+C R+ IMV G+LRCIGS QHLK++FG LE++VK P++V ++ E Sbjct: 1379 LEIFAAIKGMRKSDAN-VAIERLADALKLQDQLKSPVKTLSEGVKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQQMWQAIQATFSNTERGA-LLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKEYLLEMKVKTPSQVEPLNTE 1530 HSP 2 Score: 95.5153 bits (236), Expect = 3.221e-19 Identity = 57/166 (34.34%), Postives = 88/166 (53.01%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEVSSVDLEDLCQIIQERVFDIPSQ 498 L L+A+IKG+ + +D+ V L+E D+ LSGG KRKL+ IA++GDP I +LDEP+ G+DP ++ +W L R+ V+ +T M+EA L R + G+L+C GS LK ++G L S+ L + C + ER+ + Q Sbjct: 577 LRLFAKIKGIQAHEVDNEVQRVLLELDMKNTQNILVQNLSGGQKRKLTFGIAILGDPQIFLLDEPTAGLDPFSRHRVWNF---LKERRADRVVLFSTQFMDEADILADRKVFISKGKLKCAGSSLFLKKKWGIGYHL--------SLQLSETC--VHERITSLVKQ 729
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: AB6A_ARATH (ABC transporter A family member 6 OS=Arabidopsis thaliana GN=ABCA6 PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 4.197e-27 Identity = 67/156 (42.95%), Postives = 94/156 (60.26%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKH--AKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEVSSVDLEDLCQ 462 L Y R+K + + ++ V E L +L A P+ SGG KR+LSVAI++IG P +V +DEPSTG+DP ++ +W VI R A+ILTTHSM EA+ LC R+GI V G+L+CIG+P+ LK R+G L + + D+E L Q Sbjct: 709 LLFYGRLKNLKGHDLNQAVEESLKSVNLFHGGVADIPAGKYSGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRINLWTVIKRAKKH---AAIILTTHSMEEAEFLCDRLGIFVDGRLQCIGNPKELKGRYGGSYVLTITTSPEHEKDVETLVQ 861
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: ABCA5_DICDI (ABC transporter A family member 5 OS=Dictyostelium discoideum GN=abcA5 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.349e-27 Identity = 65/140 (46.43%), Postives = 93/140 (66.43%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVK 420 L LY IKGV + ++ VV + DL K A + SGGNKRK+S++IAM+G+P +V++DE S+G DPI + +VIS L + +ILT+HSM+E QALC+R+ IM GQ +C+GS QH+K++FG +EVK Sbjct: 1421 LSLYCAIKGVPDDKISLVVEAFIKMMDLGKIANSNTGGYSGGNKRKVSLSIAMLGNPSVVLIDEASSGCDPIIRYRQCQVISELGKNK---VIILTSHSMSEIQALCSRMTIMRDGQFKCLGSTQHIKSKFGAGYSVEVK 1557 HSP 2 Score: 97.4413 bits (241), Expect = 8.475e-20 Identity = 61/166 (36.75%), Postives = 96/166 (57.83%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLV-EFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRF--GNFLELEVKPTEVSSVDLEDLCQIIQERVFDI 489 LE+YA +KG+ + K+ E DL + P+ +LSGG KRKL + IA IG I+ LDE S+GMDP ++R +W+ + LS ++GKT +ILTTH ++EA L RI I+ G+L GS LK ++ G L + +++ + Q I++++ D+ Sbjct: 602 LEIYASLKGITNKKQIKSESLKMANEIDLGEKLHTPAGSLSGGQKRKLCLGIAFIGRSTIIFLDEVSSGMDPSSRRKVWDFL--LSHKKGKT-IILTTHYLDEADYLSDRISIISHGKLITDGSSLFLKNKYGVGYLLTCSKSLNTIDQFNVDQVTQFIRDQIPDV 764
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: AB10A_ARATH (ABC transporter A family member 10 OS=Arabidopsis thaliana GN=ABCA10 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 9.349e-27 Identity = 70/186 (37.63%), Postives = 106/186 (56.99%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKH--AKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEVSSVDLEDLCQII---QERVFDIPSQRRSLLDDLEVCIGGI 543 L Y R+K + + V E L L A KP+ SGG KR+LSVAI++IG+P +V +DEPSTG+DP +++ +W VI R + TA+ILTTHSM EA+ LC R+GI V G L+C+G+P+ LK R+G + + +E + + I +RV+ + ++ + EV I + Sbjct: 686 LLFYGRLKNIKGSALMQAVEESLKSVSLFDGGVADKPAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKDLWTVIQR---AKQNTAIILTTHSMEEAEFLCDRLGIFVDGGLQCVGNPKELKGRYGGSYVFTMTTSVEHEEKVERMVKHISPNSKRVYHLAGTQKFEIPKQEVMIADV 868
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: AB12A_ARATH (ABC transporter A family member 12 OS=Arabidopsis thaliana GN=ABCA12 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.221e-26 Identity = 69/186 (37.10%), Postives = 106/186 (56.99%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHA--KKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEVSSVDLEDLCQIIQ---ERVFDIPSQRRSLLDDLEVCIGGI 543 L Y R+K + + V E L L KP+ SGG KR+LSVAI++IG+P +V LDEPSTG+DP +++ +W VI R + TA+ILTTHSM EA+ LC R+GI V G L+CIG+ + LK+R+G + + ++E L + + ++++ + ++ L EV I + Sbjct: 694 LLFYGRLKNIKGSDLTQAVEESLKSVSLYDGGVGDKPAGNYSGGMKRRLSVAISLIGNPKVVYLDEPSTGLDPASRKNLWNVIKR---AKQNTAIILTTHSMEEAEFLCDRLGIFVDGGLQCIGNSKELKSRYGGSYVFTMTTSSKHEEEVERLVESVSPNAKKIYHLAGTQKFELPKQEVRIAEV 876
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: ABCA3_DICDI (ABC transporter A family member 3 OS=Dictyostelium discoideum GN=abcA3 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.720e-26 Identity = 58/140 (41.43%), Postives = 88/140 (62.86%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVK 420 + LY RIKG+ E ++ + V + DL SGGNKRK+++++A++G+P + LDE S G+DP+ RFMW VI+ L + +ILTTHSM E A+C R+ IM G++ C+GS QH+K +FG+ ++VK Sbjct: 1391 IRLYCRIKGIEESKIQETVEAFIKMMDLGSIGNSNVAGYSGGNKRKVALSVAIVGNPSVCFLDEVSAGVDPVVARFMWNVITELKKDK---VIILTTHSMLECSAVCDRLTIMKSGKMMCLGSIQHIKDKFGSGYSIDVK 1527 HSP 2 Score: 87.8113 bits (216), Expect = 6.715e-17 Identity = 80/259 (30.89%), Postives = 126/259 (48.65%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKL-VEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG-DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRF--GNFLELEVKPTEVSSVDLEDLCQ--IIQERVFDIPSQRRSL-------------LDDLEVCIGG--IDSISSENATAAEISLSQEMLLIVGCWLGNEERIKTLISSSSSPDRIFGEQLSEQLVR 714 L YA++KG + + +K+ +E L + TLSGG KRKL + IA IG + I+ LDE S+G+DP+++ + + I +S ++GKT +IL+TH M+EA L I I+ G+L+C GSP LK RF G L + K TE + + ++ I Q + S+ LE C IDS +T E+ L + N+ +K +S+ SS ++ G+QL L++ Sbjct: 597 LIFYAQLKGYSNLKEAKTEAKKMGIEVGLELKLHNKAGTLSGGQKRKLCLGIAFIGPNSNILFLDEVSSGLDPLSRSEVQDFI--ISKKKGKT-IILSTHYMDEADLLGDTISIIAHGKLKCNGSPLFLKNRFGVGYLLTITKKSTEFNKDSVMEITNKYIKQAHILSDAGTELSIRLPMESLPMFSQYFKHLEDCKNQLLIDSYGISISTLEEVFLKIGQETLKSTPNFNDPAVKEALSTKSSGVKV-GQQLKGLLIK 851
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: ABCAB_DICDI (ABC transporter A family member 11 OS=Dictyostelium discoideum GN=abcA11 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.553e-26 Identity = 58/143 (40.56%), Postives = 92/143 (64.34%), Query Frame = 1 Query: 1 LELYARIKGVAEYR--MDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKP 423 L L++R+K + + ++D + + +F + K S LSGG KRKLSVA +IGDP +V+LDEPST +DPI++ + +I L + ++I+TTHS+NE C R+ IMV G++RCIG+P HLK ++G+ +++ P Sbjct: 555 LYLFSRLKSITTTKSELEDEIDFYINKFSIQSFKNKKSSDLSGGTKRKLSVACCLIGDPQVVLLDEPSTSLDPISRNELHSLIDELKVNK---SIIMTTHSINEINQCCNRVAIMVDGKIRCIGTPNHLKHKYGSGYTIDIIP 694 The following BLAST results are available for this feature:
BLAST of CX675148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675148 ID=CX675148; Name=CX675148; organism=Citrus sinensis; type=EST; length=746bpback to top |