CX675148
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_RHIEC (Nod factor export ATP-binding protein I OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=nodI PE=3 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 2.088e-18 Identity = 55/128 (42.97%), Postives = 81/128 (63.28%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFT-LSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 L +Y+R G+ R + VM L+EF L+ + LSGG KR+L++A A+I DP ++++DEP+TG+DP A+ +WE + L TR GKT +ILTTH M EA+ LC R+ ++ GG+ G P L Sbjct: 111 LLVYSRYFGM-NTRKVEAVMSSLLEFARLESKVNARVSELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRSLLTR-GKT-IILTTHFMEEAERLCDRLCVLEGGRSIAEGRPHDL 235
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_RHILO (Nod factor export ATP-binding protein I OS=Rhizobium loti GN=nodI PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16 Identity = 52/128 (40.62%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFT-LSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 L ++ R G++ R + V+ L+EF L+ + LSGG KR L++A A+I DP ++++DEP+TG+DP A+ +WE + L R GKT +ILTTH M EA+ LC R+ ++ G+ G PQ L Sbjct: 135 LLVFGRYFGMST-RQSEAVIPSLLEFARLERKADARVSELSGGMKRCLTMARALINDPQLIVMDEPTTGLDPHARHLIWERLRALLAR-GKT-IILTTHFMEEAERLCDRLCVLEKGRNIAEGGPQAL 259
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_RHIS3 (Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain N33) GN=nodI PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.552e-16 Identity = 50/127 (39.37%), Postives = 77/127 (60.63%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 L ++ R G++ ++ +V+ L L A LSGG KR+L++A A+I DP ++++DEP+TG+DP A+ +WE + L R GKT +ILTTH M EA+ LC R+ ++ G+ GSP L Sbjct: 99 LLVFGRYFGMSTRKIKEVIPSLLEFARLESKADARVGELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRFLLAR-GKT-IILTTHFMEEAERLCDRLCVLEHGRKLAEGSPHAL 223
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_RHIL3 (Nod factor export ATP-binding protein I OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=nodI PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.353e-16 Identity = 49/112 (43.75%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 49 DVVMEKLVEFDLLKH-AKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 + V+ L+EF L+ A LSGG KR+L++A A+I DP ++ILDEP+TG+DP A+ +WE + L R GKT ++LTTH M EA+ LC R+ ++ G+ G P L Sbjct: 121 ETVIPSLLEFARLESKANTRVADLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLAR-GKT-ILLTTHIMEEAERLCDRLCVLEAGRKIAEGRPHAL 230
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_BURTA (Nod factor export ATP-binding protein I OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=nodI PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.353e-16 Identity = 52/128 (40.62%), Postives = 82/128 (64.06%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKH-AKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 L ++AR G+A + +V L+EF L++ A LSGG KR+L++A A++ +P +++LDEP+TG+DP A+ MWE + L R GKT ++LTTH M EA+ LC R+ ++ G+ G+P+ L Sbjct: 99 LLVFARYFGLAAHEARALV-PPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNNPDVLVLDEPTTGLDPQARHLMWERLRSLLVR-GKT-ILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPRTL 223
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI1_RHIME (Nod factor export ATP-binding protein I OS=Rhizobium meliloti GN=nodI PE=3 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 4.353e-16 Identity = 48/112 (42.86%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 49 DVVMEKLVEFDLLKHAKKPSFT-LSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 + V+ L+EF L++ + LSGG KR+L++A A+I DP ++ILDEP+TG+DP A+ +WE + L R GKT ++LTTH M EA+ LC R+ ++ G G P L Sbjct: 145 EAVIPSLLEFARLENKADARVSDLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLAR-GKT-ILLTTHIMEEAERLCDRLCVLEAGHKIAEGRPHML 254
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_RHILV (Nod factor export ATP-binding protein I OS=Rhizobium leguminosarum bv. viciae GN=nodI PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.685e-16 Identity = 49/112 (43.75%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 49 DVVMEKLVEFDLLKH-AKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 + V+ L+EF L+ A LSGG KR+L++A A+I DP ++ILDEP+TG+DP A+ +WE + L R GKT ++LTTH M EA+ LC R+ ++ G+ G P L Sbjct: 121 ETVIPSLLEFARLESKANTRVADLSGGMKRRLTLAGALINDPQLLILDEPTTGLDPHARHLIWERLRSLLAR-GKT-ILLTTHIMEEAERLCDRLCVLEAGRKIAEGRPHAL 230
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_RHIGA (Nod factor export ATP-binding protein I OS=Rhizobium galegae GN=nodI PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.685e-16 Identity = 49/121 (40.50%), Postives = 78/121 (64.46%), Query Frame = 1 Query: 37 YRMDDVVMEKLVEFDLLKHAKKPSFT------LSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 ++M +EKL+ LL+ A+ + LSGG KR+L++A A++ DP ++ILDEP+TG+DP A+ +WE + L R GKT ++LTTH M+EA+ +C R+ ++ GG++ G P L Sbjct: 149 FQMSTRAIEKLIP-SLLEFAQLEAKADVRVSDLSGGMKRRLTLARALVNDPQLLILDEPTTGLDPPARHQIWERLRSLLIR-GKT-ILLTTHMMDEAERMCDRLCVLEGGRMIAEGPPLSL 266
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_BURPS (Nod factor export ATP-binding protein I OS=Burkholderia pseudomallei GN=nodI PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.685e-16 Identity = 50/127 (39.37%), Postives = 76/127 (59.84%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 L ++AR G+ + +V L L A LSGG KR+L++A A++ DP +++LDEP+TG+DP A+ MWE + L R GKT ++LTTH M EA+ LC R+ ++ G+ G+P+ L Sbjct: 99 LLVFARYFGLTAHAARALVPPLLEFAKLESKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLAR-GKT-ILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPRML 223
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_BURP1 (Nod factor export ATP-binding protein I OS=Burkholderia pseudomallei (strain 1710b) GN=nodI PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.685e-16 Identity = 50/127 (39.37%), Postives = 76/127 (59.84%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 L ++AR G+ + +V L L A LSGG KR+L++A A++ DP +++LDEP+TG+DP A+ MWE + L R GKT ++LTTH M EA+ LC R+ ++ G+ G+P+ L Sbjct: 99 LLVFARYFGLTAHAARALVPPLLEFAKLESKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLAR-GKT-ILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPRML 223 The following BLAST results are available for this feature:
BLAST of CX675148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675148 ID=CX675148; Name=CX675148; organism=Citrus sinensis; type=EST; length=746bpback to top |