CX675148
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_BURMA (Nod factor export ATP-binding protein I OS=Burkholderia mallei GN=nodI PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.685e-16 Identity = 50/127 (39.37%), Postives = 76/127 (59.84%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 L ++AR G+ + +V L L A LSGG KR+L++A A++ DP +++LDEP+TG+DP A+ MWE + L R GKT ++LTTH M EA+ LC R+ ++ G+ G+P+ L Sbjct: 99 LLVFARYFGLTAHAARALVPPLLEFAKLESKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLAR-GKT-ILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPRML 223
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI2_RHIME (Nod factor export ATP-binding protein I OS=Rhizobium meliloti GN=nodI PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.685e-16 Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 49 DVVMEKLVEFDLLKHAKKPSFT-LSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 + V+ L+EF L++ + LSGG KR+L++A A+I DP ++ILDEP+TG+DP A+ +WE + L R GKT ++LTTH M EA+ LC R+ ++ G+ G P L Sbjct: 145 EAVIPSLLEFARLENKVDARVSDLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLAR-GKT-ILLTTHIMEEAERLCDRLCVLEAGRKIAEGRPHVL 254
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_BURS3 (Nod factor export ATP-binding protein I OS=Burkholderia sp. (strain 383) GN=nodI PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 9.697e-16 Identity = 46/110 (41.82%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 55 VMEKLVEFDLLKH-AKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 +++ L+EF L++ A LSGG KR+L++A A++ DP +++LDEP+TG+DP A+ MWE + L R GKT +++TTH M EA+ LC R+ ++ G+ G+P L Sbjct: 116 LVKPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLAR-GKT-ILITTHFMEEAERLCDRLCVIEEGRKIAEGAPHAL 223
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_RALME (Nod factor export ATP-binding protein I OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=nodI PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.266e-15 Identity = 50/128 (39.06%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLK-HAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 L ++ R G++ ++ + V KL+EF L+ A LSGG +R+L+VA A+I DP ++I+DEP+TG+DP A+ +WE + L + GKT ++LTTH M EA+ LC + ++ G+ G P L Sbjct: 98 LRIFGRYFGLSSAQIAERV-PKLLEFARLESRADAQVRDLSGGMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLLS-AGKT-ILLTTHFMEEAERLCNHLCVIDAGRKIAEGKPHEL 222
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_BURCA (Nod factor export ATP-binding protein I OS=Burkholderia cenocepacia (strain AU 1054) GN=nodI PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.654e-15 Identity = 46/106 (43.40%), Postives = 70/106 (66.04%), Query Frame = 1 Query: 67 LVEFDLLKH-AKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 L+EF L++ A LSGG KR+L++A A++ DP +++LDEP+TG+DP A+ MWE + L R GKT +++TTH M EA+ LC R+ ++ G+ G+P L Sbjct: 120 LLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLAR-GKT-ILITTHFMEEAERLCDRLCVIEEGRKIAEGAPHAL 223
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: YHIH_ECOLI (Uncharacterized ABC transporter ATP-binding protein yhiH OS=Escherichia coli (strain K12) GN=yhiH PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 2.160e-15 Identity = 49/132 (37.12%), Postives = 79/132 (59.85%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG 396 LEL+AR+ + E + V E F L +L G +++LS+A+A+I P ++ILDEP++G+DP+A+ W+++ LS RQ K + ++TH MNEA+ C RI +M G++ G+PQ L + G Sbjct: 370 LELHARLFHIPEAEIPARVAEMSERFKLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLS-RQDKVTIFISTHFMNEAER-CDRISLMHAGKVLASGTPQELVEKRG 499 HSP 2 Score: 76.6406 bits (187), Expect = 1.548e-13 Identity = 41/128 (32.03%), Postives = 72/128 (56.25%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 384 ++ +AR+ G + + + E L L +P+ LSGG K+KL + A+I DP ++ILDEP+TG+DP+++ W++I + RQ +V++ T M EA+ + M G++ GS + L+ Sbjct: 110 VDFFARLFGHDKAEREVRINELLTSTGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWDLIDSIRQRQSNMSVLVATAYMEEAERFDWLVA-MNAGEVLATGSAEELR 236
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_BRAJA (Nod factor export ATP-binding protein I OS=Bradyrhizobium japonicum GN=nodI PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.160e-15 Identity = 55/158 (34.81%), Postives = 89/158 (56.33%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTL-SGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEVSSVDLEDLCQIIQ 471 L ++ R G++ R + V+ L+EF L+ +L SGG KR+L++A A+I DP ++++DEP+TG+DP A+ +WE + L R GKT ++LTTH M EA+ LC R+ ++ G G P L + E+ DL+ L ++I+ Sbjct: 101 LLVFGRYFGMSA-RTIEAVVPSLLEFARLESKADVRVSLLSGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLAR-GKT-ILLTTHFMEEAERLCDRLCVLESGCKIAEGKPDALIDE-----HIGCNVIEIYGGDLDQLRELIR 250
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_RALSO (Nod factor export ATP-binding protein I OS=Ralstonia solanacearum GN=nodI PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.821e-15 Identity = 46/111 (41.44%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 58 MEKLVEFDLLKH-AKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 387 M L+EF L+ A P LSGG +R+L+VA ++I DP ++++DEP+TG+DP A+ +WE + L GKT ++LTTH M EA+ LC + ++ G+ G P L T Sbjct: 128 MPGLLEFARLEQKADAPVRALSGGMRRRLTVARSLINDPDVLVMDEPTTGLDPQARHLIWERLRSL-LASGKT-ILLTTHFMEEAERLCDELCVIDNGRKIAQGKPHELIT 236
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_RALEJ (Nod factor export ATP-binding protein I OS=Ralstonia eutropha (strain JMP134) GN=nodI PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.685e-15 Identity = 50/128 (39.06%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKH-AKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 L ++ R G++ ++ V L+EF L++ A LSGG +R+L+VA A+I DP ++I+DEP+TG+DP A+ +WE + L GKT ++LTTH M EA+ LC + ++ GG+ G P L Sbjct: 120 LRIFGRYFGLSSAVIERRV-PALLEFARLENRANAQVRDLSGGMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLMA-SGKT-ILLTTHFMEEAERLCNYLCVIDGGRKIAEGKPHDL 244
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: YVFR_BACSU (Uncharacterized ABC transporter ATP-binding protein yvfR OS=Bacillus subtilis GN=yvfR PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.285e-15 Identity = 68/185 (36.76%), Postives = 94/185 (50.81%), Query Frame = 1 Query: 52 VVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEVSSVDLEDL-CQIIQERVFDIPSQRRSLLDDLEVCIGGIDSISSENATAAEISLSQEML 603 V + L + DL A+K LSGG KR+LS A+A+ G+P ++ILDEP+ GMD ++ W+ I LS QGKT +I +TH + EA RI GQL GSP +++R + V T SS LE L C ERV I R+++ + I EN A +I + Q L Sbjct: 114 VSLTALTKEDLKTRAEK----LSGGQKRRLSFALALAGNPELLILDEPTVGMDTSSRHRFWQTIHGLSD-QGKT-IIFSTHYLQEADDAAQRILFFTEGQLVADGSPMQIRSR---IQKQSVSFTLHSSESLERLSCHPEVERV--IHEHERTIIQTSNT-DKVLALIFQENIHARDIRIEQATL 286 The following BLAST results are available for this feature:
BLAST of CX675148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675148 ID=CX675148; Name=CX675148; organism=Citrus sinensis; type=EST; length=746bpback to top |