CK936512

Overview
NameCK936512
Unique NameCK936512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_PSEMY (Urease accessory protein ureG OS=Pseudomonas mendocina (strain ymp) GN=ureG PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.710e-54
Identity = 92/145 (63.45%), Postives = 116/145 (80.00%), Query Frame = 1
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            N +   VGIGGPVG+GKTAL LALC+ LR++Y++A VTNDI+T+ED +FL+RN AL  ERI  VETGGCPH AIRED SINL  +E+L+  F   DL++ ESGGDNL+A FS EL+D  +Y+I+VS GDK+PRKGGPGI ++DLL
Sbjct:    2 NSQPLRVGIGGPVGSGKTALTLALCRALRERYNIAVVTNDIYTQEDAQFLVRNEALEPERIIGVETGGCPHTAIREDASINLEAVEQLNRRFPGLDLIIVESGGDNLSATFSPELSDLTLYVIDVSAGDKLPRKGGPGICKSDLL 146          

HSP 2 Score: 43.8986 bits (102), Expect = 1.710e-54
Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VMERD L+MR   PF+F+  K G G++EI+  I
Sbjct:  157 VGASLEVMERDTLKMRGDKPFVFSNQKIGQGLDEIIAFI 195          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_THEEB (Urease accessory protein ureG OS=Thermosynechococcus elongatus (strain BP-1) GN=ureG PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.710e-54
Identity = 93/144 (64.58%), Postives = 113/144 (78.47%), Query Frame = 1
Query:  166 ERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            E    VG+ GPVG+GKTAL+ ALCK LRD+Y LA VTNDI+T+ED +FL+R+ ALP ERI  VETGGCPH AIRED S+NL  +++L   F+  DL+  ESGGDNLAA FS EL D  IY+I+V+ GDKIPRKGGPGIT++DLL
Sbjct:    2 ETVLRVGVAGPVGSGKTALVDALCKALRDRYRLAVVTNDIYTQEDAQFLVRSQALPPERILGVETGGCPHTAIREDASLNLAAIQQLETAFRPLDLIFVESGGDNLAATFSPELVDLTIYVIDVAAGDKIPRKGGPGITKSDLL 145          

HSP 2 Score: 42.743 bits (99), Expect = 1.710e-54
Identity = 16/36 (44.44%), Postives = 27/36 (75.00%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIV 704
            +GADL VM+RD L+MR   P++   +K GLG+++++
Sbjct:  156 VGADLEVMKRDTLKMRGDRPYVMTNLKTGLGLDQVI 191          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_AZOVD (Urease accessory protein ureG OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ureG PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.788e-54
Identity = 95/145 (65.52%), Postives = 113/145 (77.93%), Query Frame = 1
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            N +   VGIGGPVG+GKTAL LALC+ LR +Y LA VTNDI+T+ED EFL+RN AL  ERI  VETGGCPH AIRED SINL  +E L+  F   DL+L ESGGDNL+A FS EL+D  +Y+I+VS GDK+PRKGGPGI ++DLL
Sbjct:    2 NSQPLRVGIGGPVGSGKTALTLALCRALRGRYELAVVTNDIYTQEDAEFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVERLNRRFPGLDLILVESGGDNLSATFSPELSDLTLYVIDVSAGDKLPRKGGPGICKSDLL 146          

HSP 2 Score: 42.3578 bits (98), Expect = 3.788e-54
Identity = 21/39 (53.85%), Postives = 26/39 (66.67%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VMERDA +MR   PF+F+  K G G+E IV  I
Sbjct:  157 VGASLEVMERDARKMRGERPFVFSNQKTGQGLETIVAFI 195          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG1_METEP (Urease accessory protein ureG 1 OS=Methylobacterium extorquens (strain PA1) GN=ureG1 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.788e-54
Identity = 94/139 (67.63%), Postives = 109/139 (78.42%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTALM  LC+  RD Y + A+TNDI+TKED   L   GALPEERI  VETGGCPH AIRED SINL  + E+   F K DL+L ESGGDNLAA FS ELAD  +Y+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:   10 VGIGGPVGSGKTALMEQLCRRFRDSYEICAITNDIYTKEDARILTVAGALPEERILGVETGGCPHTAIREDASINLAAVAEMRRRFPKLDLVLIESGGDNLAATFSPELADLTLYVIDVAGGEKIPRKGGPGITRSDLL 148          

HSP 2 Score: 43.1282 bits (100), Expect = 3.788e-54
Identity = 18/42 (42.86%), Postives = 28/42 (66.67%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQA 722
            +GADL+VME D  RMR   P++FA ++ G G + +   I++A
Sbjct:  159 VGADLSVMEADTQRMRGTRPYVFASLREGHGADTVARFIVEA 200          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_AZOSB (Urease accessory protein ureG OS=Azoarcus sp. (strain BH72) GN=ureG PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 6.437e-54
Identity = 93/143 (65.03%), Postives = 114/143 (79.72%), Query Frame = 1
Query:  169 RAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +A  VGIGGPVG+GKTAL LALC+ LRDKY++A VTNDI+T ED +FL+RN AL  +RI  VETGGCPH AIRED SINL  ++ L+  F   +++  ESGGDNLAA FS EL+D  +Y+I+VS GDKIPRKGGPGIT++DLL
Sbjct:    5 QALRVGIGGPVGSGKTALTLALCRALRDKYNIAVVTNDIYTAEDAQFLVRNEALAPDRIIGVETGGCPHTAIREDASINLEAVDRLNQRFPGLEIIFVESGGDNLAATFSPELSDLTLYVIDVSAGDKIPRKGGPGITKSDLL 147          

HSP 2 Score: 42.3578 bits (98), Expect = 6.437e-54
Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM+RDA +MR   PFIF+ +K G G+ EI+  I
Sbjct:  158 VGASLEVMDRDARKMRGERPFIFSNLKTGQGLAEIIAFI 196          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_PSEPF (Urease accessory protein ureG OS=Pseudomonas fluorescens (strain Pf0-1) GN=ureG PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 6.438e-54
Identity = 94/145 (64.83%), Postives = 115/145 (79.31%), Query Frame = 1
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            N +   VGIGGPVG+GKTAL LALC  LR++Y+LA VTNDI+T+ED +FL+RN AL  ERI  VETGGCPH AIRED SINL  +++L+  F   DL+L ESGGDNL+A FS EL+D  IY+I+VS GDK+PRKGGPGI ++DLL
Sbjct:    2 NTQPLRVGIGGPVGSGKTALTLALCLALRERYNLAVVTNDIYTREDADFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFPGLDLILVESGGDNLSATFSPELSDLTIYVIDVSAGDKLPRKGGPGICKSDLL 146          

HSP 2 Score: 42.3578 bits (98), Expect = 6.438e-54
Identity = 19/39 (48.72%), Postives = 26/39 (66.67%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L +M  D  RMR+G PF+F+  K G G+EEI+  I
Sbjct:  157 VGASLEMMNSDTQRMRNGKPFVFSNQKTGQGLEEIIAFI 195          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_PSEAE (Urease accessory protein ureG OS=Pseudomonas aeruginosa GN=ureG PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.393e-54
Identity = 93/139 (66.91%), Postives = 114/139 (82.01%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL LALC+ LR++Y+LA VTNDI+T+ED EFL+RN AL  ERI  VETGGCPH AIRED SINL  +++L+  F   +L+L ESGGDNL+A FS EL+D  +Y+I+VS GDKIPRKGGPGI ++DLL
Sbjct:    8 VGIGGPVGSGKTALTLALCRELRERYNLAVVTNDIYTQEDAEFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFPGLELILVESGGDNLSATFSPELSDLTLYVIDVSAGDKIPRKGGPGICKSDLL 146          

HSP 2 Score: 43.1282 bits (100), Expect = 8.393e-54
Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM+RDA RMR   PF+F+  K G G++EI+  I
Sbjct:  157 VGASLDVMDRDARRMRGDKPFVFSNQKTGQGLDEIIAFI 195          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_PSEAB (Urease accessory protein ureG OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ureG PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.393e-54
Identity = 93/139 (66.91%), Postives = 114/139 (82.01%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL LALC+ LR++Y+LA VTNDI+T+ED EFL+RN AL  ERI  VETGGCPH AIRED SINL  +++L+  F   +L+L ESGGDNL+A FS EL+D  +Y+I+VS GDKIPRKGGPGI ++DLL
Sbjct:    8 VGIGGPVGSGKTALTLALCRELRERYNLAVVTNDIYTQEDAEFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFPGLELILVESGGDNLSATFSPELSDLTLYVIDVSAGDKIPRKGGPGICKSDLL 146          

HSP 2 Score: 43.1282 bits (100), Expect = 8.393e-54
Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM+RDA RMR   PF+F+  K G G++EI+  I
Sbjct:  157 VGASLDVMDRDARRMRGDKPFVFSNQKTGQGLDEIIAFI 195          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_PSEA8 (Urease accessory protein ureG OS=Pseudomonas aeruginosa (strain LESB58) GN=ureG PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.393e-54
Identity = 93/139 (66.91%), Postives = 114/139 (82.01%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL LALC+ LR++Y+LA VTNDI+T+ED EFL+RN AL  ERI  VETGGCPH AIRED SINL  +++L+  F   +L+L ESGGDNL+A FS EL+D  +Y+I+VS GDKIPRKGGPGI ++DLL
Sbjct:    8 VGIGGPVGSGKTALTLALCRELRERYNLAVVTNDIYTQEDAEFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFPGLELILVESGGDNLSATFSPELSDLTLYVIDVSAGDKIPRKGGPGICKSDLL 146          

HSP 2 Score: 43.1282 bits (100), Expect = 8.393e-54
Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM+RDA RMR   PF+F+  K G G++EI+  I
Sbjct:  157 VGASLDVMDRDARRMRGDKPFVFSNQKTGQGLDEIIAFI 195          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_ALHEH (Urease accessory protein ureG OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=ureG PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.094e-53
Identity = 92/142 (64.79%), Postives = 113/142 (79.58%), Query Frame = 1
Query:  172 AFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            A  VGIGGPVG+GKTAL+ ALCK LRD Y +A VTNDI+T+ED EFL RNGALP +RI  VETGGCPH AIRED S+NL  + +L+  F + +++  ESGGDNL+A FS EL+D  +Y+I+V  GDKIPRKGGPGIT++DLL
Sbjct:    6 ALRVGIGGPVGSGKTALVEALCKALRDHYEIAVVTNDIYTREDAEFLTRNGALPADRIIGVETGGCPHTAIREDASMNLAAVGDLNQRFPELEVVFIESGGDNLSATFSPELSDLTLYVIDVCAGDKIPRKGGPGITRSDLL 147          

HSP 2 Score: 42.3578 bits (98), Expect = 1.094e-53
Identity = 18/43 (41.86%), Postives = 29/43 (67.44%), Query Frame = 3
Query:  591 SAIGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQ 719
            + +GA L VM+RD+ RMR   PFIF  +  G G+E +++ I++
Sbjct:  156 AGVGASLEVMDRDSRRMRGDRPFIFTNLHAGEGLESVIDFIIR 198          
The following BLAST results are available for this feature:
BLAST of CK936512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UREG_PSEMY1.710e-5463.45Urease accessory protein ureG OS=Pseudomonas mendo... [more]
UREG_THEEB1.710e-5464.58Urease accessory protein ureG OS=Thermosynechococc... [more]
UREG_AZOVD3.788e-5465.52Urease accessory protein ureG OS=Azotobacter vinel... [more]
UREG1_METEP3.788e-5467.63Urease accessory protein ureG 1 OS=Methylobacteriu... [more]
UREG_AZOSB6.437e-5465.03Urease accessory protein ureG OS=Azoarcus sp. (str... [more]
UREG_PSEPF6.438e-5464.83Urease accessory protein ureG OS=Pseudomonas fluor... [more]
UREG_PSEAE8.393e-5466.91Urease accessory protein ureG OS=Pseudomonas aerug... [more]
UREG_PSEAB8.393e-5466.91Urease accessory protein ureG OS=Pseudomonas aerug... [more]
UREG_PSEA88.393e-5466.91Urease accessory protein ureG OS=Pseudomonas aerug... [more]
UREG_ALHEH1.094e-5364.79Urease accessory protein ureG OS=Alkalilimnicola e... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936512 ID=CK936512; Name=CK936512; organism=Citrus sinensis; type=EST; length=740bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGATGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGTTCAAAGCAGACCTA
CTTCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAAACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGACCTTCTGCAATAG
GAGCTGACTTAGCAGTAATGGAGCGTGATGCACTCCGGATGCGTGATGGA
GGGCCTTTTATCTTCGCTCAGGTCAAGCATGGGCTTGGTGTGGAGGAAAT
AGTGAATCACATTTTACAGGCTTGGGAAGCANNNNCAGGG
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