CK936512

Overview
NameCK936512
Unique NameCK936512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_HAEIN (Urease accessory protein ureG OS=Haemophilus influenzae GN=ureG PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.156e-48
Identity = 84/154 (54.55%), Postives = 110/154 (71.43%), Query Frame = 1
Query:  136 APPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            A  I  RN       +G+ GPVG GKTAL+  L + +  KYS+A +TNDI+T+ED EFL +N  LP ERI  VETGGCPH AIRED S+NL  ++E+   F   +++  ESGGDNL+A FS +LAD  I++I+V+ G+KIPRKGGPGIT++DLL
Sbjct:    6 ATMINKRNIMRNYIKIGVAGPVGAGKTALIEKLTREIASKYSVAVITNDIYTQEDAEFLTKNSLLPPERIMGVETGGCPHTAIREDASMNLEAVDEMVTRFPDVEIVFIESGGDNLSATFSPDLADVTIFVIDVAQGEKIPRKGGPGITRSDLL 159          

HSP 2 Score: 41.9726 bits (97), Expect = 2.156e-48
Identity = 19/39 (48.72%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GADL+VMERDA RMR+G PFIF  +     ++ ++  I
Sbjct:  170 VGADLSVMERDARRMRNGQPFIFTNLMKKENLDGVIGWI 208          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_HELAH (Urease accessory protein ureG OS=Helicobacter acinonychis (strain Sheeba) GN=ureG PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.160e-48
Identity = 82/139 (58.99%), Postives = 108/139 (77.70%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+ GPVG+GKTAL+ AL + +   Y +A +TNDI+TKED EF+ +N  +P +RI  VETGGCPH AIRED S+NL  +EE+   F   +LLL ESGGDNL+A F+ ELAD+ I++I+V+ GDKIPRKGGPGIT++DLL
Sbjct:    4 IGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRDRIIGVETGGCPHTAIREDASMNLEAVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVIDVAEGDKIPRKGGPGITRSDLL 142          

HSP 2 Score: 40.0466 bits (92), Expect = 2.160e-48
Identity = 16/36 (44.44%), Postives = 26/36 (72.22%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIV 704
            +GADL VMERD+ +MR   PFIF  ++   G+++++
Sbjct:  153 VGADLKVMERDSKKMRGEKPFIFTNIRSKEGLDDVI 188          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_TOLAT (Urease accessory protein ureG OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=ureG PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.814e-48
Identity = 87/139 (62.59%), Postives = 106/139 (76.26%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VG+GGPVG+GKTAL+  LCK +R+ + +A VTNDI+TKED   L   GAL  ERI  VETGGCPH AIRED S+NL  +E LS  F   D++  ESGGDNL+A FS ELAD  IY+I+V+ G+KIPRKGGPGIT++DLL
Sbjct:   10 VGVGGPVGSGKTALLEVLCKKMRNHFEIAVVTNDIYTKEDQRILTEAGALAAERIVGVETGGCPHTAIREDASMNLAAVEALSEKFGNLDVVFVESGGDNLSATFSPELADMTIYVIDVAEGEKIPRKGGPGITKSDLL 148          

HSP 2 Score: 38.1206 bits (87), Expect = 2.814e-48
Identity = 19/40 (47.50%), Postives = 26/40 (65.00%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHIL 716
            +GA L VME D  RMR   P+ FA +K G GV+ I++ I+
Sbjct:  159 VGARLDVMESDTNRMRPEKPWTFANLKAGQGVDTIIDFIV 198          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_HELPS (Urease accessory protein ureG OS=Helicobacter pylori (strain Shi470) GN=ureG PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.815e-48
Identity = 82/139 (58.99%), Postives = 108/139 (77.70%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+ GPVG+GKTAL+ AL + +   Y +A +TNDI+TKED EF+ +N  +P +RI  VETGGCPH AIRED S+NL  +EE+   F   +LLL ESGGDNL+A F+ ELAD+ I++I+V+ GDKIPRKGGPGIT++DLL
Sbjct:    4 IGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRDRIIGVETGGCPHTAIREDASMNLEAVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVIDVAEGDKIPRKGGPGITRSDLL 142          

HSP 2 Score: 39.6614 bits (91), Expect = 2.815e-48
Identity = 16/36 (44.44%), Postives = 26/36 (72.22%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIV 704
            +GADL VMERD+ +MR   PFIF  ++   G+++++
Sbjct:  153 VGADLKVMERDSKKMRGEKPFIFTNIRAKEGLDDVI 188          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_HELPJ (Urease accessory protein ureG OS=Helicobacter pylori J99 GN=ureG PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.815e-48
Identity = 82/139 (58.99%), Postives = 108/139 (77.70%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+ GPVG+GKTAL+ AL + +   Y +A +TNDI+TKED EF+ +N  +P +RI  VETGGCPH AIRED S+NL  +EE+   F   +LLL ESGGDNL+A F+ ELAD+ I++I+V+ GDKIPRKGGPGIT++DLL
Sbjct:    4 IGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRDRIIGVETGGCPHTAIREDASMNLEAVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVIDVAEGDKIPRKGGPGITRSDLL 142          

HSP 2 Score: 39.6614 bits (91), Expect = 2.815e-48
Identity = 16/36 (44.44%), Postives = 26/36 (72.22%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIV 704
            +GADL VMERD+ +MR   PFIF  ++   G+++++
Sbjct:  153 VGADLKVMERDSKKMRGEKPFIFTNIRAKEGLDDVI 188          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_MARMS (Urease accessory protein ureG OS=Marinomonas sp. (strain MWYL1) GN=ureG PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 3.666e-48
Identity = 84/144 (58.33%), Postives = 113/144 (78.47%), Query Frame = 1
Query:  166 ERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            ++   +G+GGPVG+GKTAL+ +LC  +RD Y++A VTNDI+T+ED +FL ++ AL  +RI  VETGGCPH AIRED S+NL  +++L     A D++  ESGGDNL+A FS EL+D+ IY+I+VS GDKIPRKGGPGIT++DLL
Sbjct:    3 KQTLRIGVGGPVGSGKTALLRSLCSAMRDYYNIAVVTNDIYTQEDAKFLTQHEALDADRILGVETGGCPHTAIREDASMNLAAIDQLLERHGALDVVFVESGGDNLSATFSPELSDFTIYVIDVSAGDKIPRKGGPGITKSDLL 146          

HSP 2 Score: 35.039 bits (79), Expect = 3.666e-48
Identity = 17/40 (42.50%), Postives = 24/40 (60.00%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHIL 716
            +GA L VM  DA   R   PFIF+ +K   G++EI+  I+
Sbjct:  157 VGASLDVMAHDAKIQRGDRPFIFSNLKSAQGLDEIIQIIV 196          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_AGRVS (Urease accessory protein ureG OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=ureG PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.668e-48
Identity = 85/139 (61.15%), Postives = 107/139 (76.98%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELS-NLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTAL   LCK +RD+YS+A VTNDI+T+ED + L+R  AL  +R+  VETGGCPH AIRED SINL  +  L+  +   D++  ESGGDNLAA FS +LAD  IY+I+V  G++IPRKGGPGIT++DLL
Sbjct:   10 VGIGGPVGSGKTALTEKLCKAMRDRYSVAVVTNDIYTREDADALIRMQALSSDRVVGVETGGCPHTAIREDASINLQAIAGLNERIPDLDVIFIESGGDNLAATFSPDLADVTIYVISVCQGEEIPRKGGPGITRSDLL 148          

HSP 2 Score: 42.3578 bits (98), Expect = 3.668e-48
Identity = 19/39 (48.72%), Postives = 26/39 (66.67%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +  DL VM+RDA RMRD  P +F+ +K G GV +IV  +
Sbjct:  159 VEVDLDVMDRDAARMRDARPHVFSDLKRGEGVADIVRFL 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_ACTP2 (Urease accessory protein ureG OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=ureG PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.779e-48
Identity = 81/139 (58.27%), Postives = 107/139 (76.98%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+ GPVG GKTAL+  L + +  KYS+A +TNDI+T+ED EFL +N  LP ERI  VETGGCPH AIRED S+NL  ++E+   F + +L+  ESGGDNL+A FS +LAD  I++I+V+ G+KIPRKGGPGIT++DLL
Sbjct:    7 IGVAGPVGAGKTALIERLTREIASKYSVAVITNDIYTQEDAEFLTKNSLLPPERIMGVETGGCPHTAIREDASMNLEAVDEMVARFPEVELIFIESGGDNLSATFSPDLADVTIFVIDVAQGEKIPRKGGPGITRSDLL 145          

HSP 2 Score: 42.743 bits (99), Expect = 4.779e-48
Identity = 19/39 (48.72%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GADL+VMERDA RMR+G PFIF  +     ++ ++  I
Sbjct:  156 VGADLSVMERDARRMRNGQPFIFTNLMKNENLDGVIGWI 194          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_HAEI8 (Urease accessory protein ureG OS=Haemophilus influenzae (strain 86-028NP) GN=ureG PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 6.222e-48
Identity = 84/154 (54.55%), Postives = 110/154 (71.43%), Query Frame = 1
Query:  136 APPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            A  I  RN       +G+ GPVG GKTAL+  L + +  KYS+A +TNDI+T+ED EFL +N  LP ERI  VETGGCPH AIRED S+NL  ++E+   F   +++  ESGGDNL+A FS +LAD  I++I+V+ G+KIPRKGGPGIT++DLL
Sbjct:    6 ATMINKRNIMRNYIKIGVAGPVGAGKTALIEKLTREIASKYSVAVITNDIYTQEDAEFLTKNSLLPPERIMGVETGGCPHTAIREDASMNLEAVDEMVTRFPDVEIVFIESGGDNLSATFSPDLADVTIFVIDVAQGEKIPRKGGPGITRSDLL 159          

HSP 2 Score: 40.4318 bits (93), Expect = 6.222e-48
Identity = 18/39 (46.15%), Postives = 26/39 (66.67%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +G DL+VMERDA RMR+G PFIF  +     ++ ++  I
Sbjct:  170 VGVDLSVMERDARRMRNGQPFIFTNLMKKENLDGVIGWI 208          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_BURTA (Urease accessory protein ureG OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=ureG PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 6.226e-48
Identity = 91/139 (65.47%), Postives = 109/139 (78.42%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKT L+  LCK +R++Y L A+TNDI+TKED   L   GALPEERI  VETGGCPH AIRED SINL  +E +   F  AD++  ESGGDNLAA FS EL+D  IY+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:   21 VGIGGPVGSGKTTLLEMLCKGMRERYDLVAITNDIYTKEDQRLLTIAGALPEERIMGVETGGCPHTAIREDASINLEAVERMLARFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLL 159          

HSP 2 Score: 28.1054 bits (61), Expect = 6.226e-48
Identity = 13/39 (33.33%), Postives = 22/39 (56.41%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA+L VM  D  +MR   P++   +K   GV +++  I
Sbjct:  170 VGANLDVMASDTKKMRGERPYVMCNLKALDGVADVIAFI 208          
The following BLAST results are available for this feature:
BLAST of CK936512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UREG_HAEIN2.156e-4854.55Urease accessory protein ureG OS=Haemophilus influ... [more]
UREG_HELAH2.160e-4858.99Urease accessory protein ureG OS=Helicobacter acin... [more]
UREG_TOLAT2.814e-4862.59Urease accessory protein ureG OS=Tolumonas auensis... [more]
UREG_HELPS2.815e-4858.99Urease accessory protein ureG OS=Helicobacter pylo... [more]
UREG_HELPJ2.815e-4858.99Urease accessory protein ureG OS=Helicobacter pylo... [more]
UREG_MARMS3.666e-4858.33Urease accessory protein ureG OS=Marinomonas sp. (... [more]
UREG_AGRVS3.668e-4861.15Urease accessory protein ureG OS=Agrobacterium vit... [more]
UREG_ACTP24.779e-4858.27Urease accessory protein ureG OS=Actinobacillus pl... [more]
UREG_HAEI86.222e-4854.55Urease accessory protein ureG OS=Haemophilus influ... [more]
UREG_BURTA6.226e-4865.47Urease accessory protein ureG OS=Burkholderia thai... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936512 ID=CK936512; Name=CK936512; organism=Citrus sinensis; type=EST; length=740bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGATGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGTTCAAAGCAGACCTA
CTTCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAAACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGACCTTCTGCAATAG
GAGCTGACTTAGCAGTAATGGAGCGTGATGCACTCCGGATGCGTGATGGA
GGGCCTTTTATCTTCGCTCAGGTCAAGCATGGGCTTGGTGTGGAGGAAAT
AGTGAATCACATTTTACAGGCTTGGGAAGCANNNNCAGGG
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