CK936512
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHOSR (Urease accessory protein ureG OS=Rhodococcus sp. (strain RHA1) GN=ureG PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 9.545e-46 Identity = 83/139 (59.71%), Postives = 110/139 (79.14%), Query Frame = 1 Query: 181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594 +GIGGPVG+GKTAL+ ALC+ LR++ SLA +TNDI+T ED +FL R+ LP+ERI AV+TGGCPH AIR+DI+ NL +++L + DL+L ESGGDNL A FS L D I++++V+GGDK+PRKGGPG+T +DLL Sbjct: 30 IGIGGPVGSGKTALVAALCRQLREELSLAVLTNDIYTTEDADFLRRHAVLPDERIAAVQTGGCPHTAIRDDITANLDAIDDLIAANPPLDLILVESGGDNLTATFSSGLIDVQIFVVDVAGGDKVPRKGGPGVTFSDLL 168 HSP 2 Score: 30.8018 bits (68), Expect = 9.545e-46 Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 3 Query: 597 IGADLAVMERDALRMRDGGP 656 +GADL VM RDA R+R+G P Sbjct: 179 VGADLGVMRRDAERVREGRP 198
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHOOB (Urease accessory protein ureG OS=Rhodococcus opacus (strain B4) GN=ureG PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 9.545e-46 Identity = 83/139 (59.71%), Postives = 110/139 (79.14%), Query Frame = 1 Query: 181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594 +GIGGPVG+GKTAL+ ALC+ LR++ SLA +TNDI+T ED +FL R+ LP+ERI AV+TGGCPH AIR+DI+ NL +++L + DL+L ESGGDNL A FS L D I++++V+GGDK+PRKGGPG+T +DLL Sbjct: 30 IGIGGPVGSGKTALVAALCRQLREELSLAVLTNDIYTTEDADFLRRHAVLPDERIAAVQTGGCPHTAIRDDITANLDAIDDLIAANPPLDLILVESGGDNLTATFSSGLIDVQIFVVDVAGGDKVPRKGGPGVTFSDLL 168 HSP 2 Score: 30.8018 bits (68), Expect = 9.545e-46 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 597 IGADLAVMERDALRMRDGGP 656 +GADLAVM RDA ++R+G P Sbjct: 179 VGADLAVMRRDAEQVREGRP 198
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_STRAW (Urease accessory protein ureG OS=Streptomyces avermitilis GN=ureG PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.157e-45 Identity = 96/180 (53.33%), Postives = 122/180 (67.78%), Query Frame = 1 Query: 67 HSHDG---LAPHSHEPIYSPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSN-LFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594 H+HDG ++ +H P + RA +G+GGPVG+GKTA + ALC+ LRD +SLA VTNDI+T+ED EFL+R LP ERI AVETG CPH AIR+DIS NL +E+L + + DL+L ESGGDNL A FS+ L D I++I+V+GGD IPRKGGPG+T ADLL Sbjct: 7 HTHDGPSAVSADAHRP-----------------DGTRRALRIGLGGPVGSGKTATVAALCRALRDAFSLAVVTNDIYTREDAEFLLREAVLPPERITAVETGACPHTAIRDDISANLEAVEDLEDEVGPLDLVLVESGGDNLTATFSKGLVDAQIFVIDVAGGDDIPRKGGPGVTTADLL 169
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHOFD (Urease accessory protein ureG OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=ureG PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.621e-45 Identity = 86/138 (62.32%), Postives = 107/138 (77.54%), Query Frame = 1 Query: 181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEE-LSNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADL 591 VGIGGPVG+GKT L+ LCK +R++Y L A+TNDI+TKED L +GALP +RI VETGGCPH AIRED SINL ++ L + AD++ ESGGDNLAA FS EL+D IY+I+V+ G+KIPRKGGPGIT++DL Sbjct: 20 VGIGGPVGSGKTTLLEMLCKGMRERYDLVAITNDIYTKEDQRLLTESGALPADRIMGVETGGCPHTAIREDASINLEAIDRMLVDFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAAGEKIPRKGGPGITKSDL 157 HSP 2 Score: 26.9498 bits (58), Expect = 1.621e-45 Identity = 16/43 (37.21%), Postives = 22/43 (51.16%), Query Frame = 3 Query: 597 IGADLAVMERDALRMRDG----GPFIFAQVKHGLGVEEIVNHI 713 +GA L VM D RMR PF+ +K GV+E++ I Sbjct: 169 VGASLDVMAADTTRMRTTVKGLKPFVMTNLKTLSGVQEVMAFI 211
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_BACPA (Urease accessory protein ureG OS=Bacillus pasteurii GN=ureG PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.623e-45 Identity = 79/139 (56.83%), Postives = 104/139 (74.82%), Query Frame = 1 Query: 181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594 +GIGGPVG+GKT L+ L + L+++YS+A +TNDI+T+ED FL+ L ++RI VETGGCPH AIRED S+N +EEL N F +++L ESGGDNL+A FS EL D IY+I+VS G IPRKGGPG+T++D L Sbjct: 6 LGIGGPVGSGKTTLVKTLSEALKEEYSIAVITNDIYTREDANFLINENILEKDRIIGVETGGCPHTAIREDASMNFEAIEELKNRFDDLEIILLESGGDNLSATFSPELVDAFIYVIDVSEGGDIPRKGGPGVTRSDFL 144 HSP 2 Score: 38.1206 bits (87), Expect = 1.623e-45 Identity = 15/36 (41.67%), Postives = 24/36 (66.67%), Query Frame = 3 Query: 597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIV 704 +G DL M+ D ++ R+G PF FA +K G++EI+ Sbjct: 155 VGVDLDTMKNDTIKARNGRPFTFANIKTKKGLDEII 190
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG1_STRGG (Urease accessory protein ureG 1 OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=ureG1 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.973e-45 Identity = 88/143 (61.54%), Postives = 113/143 (79.02%), Query Frame = 1 Query: 169 RAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSN-LFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594 RA +G+GGPVG+GKTA + ALC+ LRD+ S+A VTNDI+T+ED +FL++N LP ERI+AVETG CPH AIR+DIS NL +E+L + + DL+L ESGGDNL A FS+ L D I++I+V+GGD IPRKGGPG+T ADLL Sbjct: 34 RALRIGLGGPVGSGKTATVAALCRELRDRLSIAVVTNDIYTREDADFLLKNAVLPPERIQAVETGACPHTAIRDDISANLEAVEDLEDAVGPLDLILVESGGDNLTATFSKGLVDAQIFVIDVAGGDDIPRKGGPGVTTADLL 176
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_MESSB (Urease accessory protein ureG OS=Mesorhizobium sp. (strain BNC1) GN=ureG PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.116e-45 Identity = 84/139 (60.43%), Postives = 105/139 (75.54%), Query Frame = 1 Query: 181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594 +GIGGPVG+GKT L L K +RD+YS+A VTNDI+TKED L R A+ E+RI VETGGCPH AIRED S+NL + L+ F D++L ESGGDNLAA FS +LAD +Y+I+V+ G+KIPRKGGP IT++DLL Sbjct: 10 IGIGGPVGSGKTTLCEVLLKSMRDRYSMAVVTNDIYTKEDALILARLQAISEDRIVGVETGGCPHTAIREDASLNLAAIAHLNRRFPDLDIILIESGGDNLAATFSPDLADLTLYVISVAQGEKIPRKGGPAITRSDLL 148 HSP 2 Score: 33.4982 bits (75), Expect = 2.116e-45 Identity = 14/39 (35.90%), Postives = 23/39 (58.97%), Query Frame = 3 Query: 597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713 +GA+L VM D ++R+G P++ + G EE+V I Sbjct: 159 VGANLDVMRSDTEKVREGRPYVMTDLSRRQGAEEVVAFI 197
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_MYCSS (Urease accessory protein ureG OS=Mycobacterium sp. (strain MCS) GN=ureG PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 2.753e-45 Identity = 82/139 (58.99%), Postives = 110/139 (79.14%), Query Frame = 1 Query: 181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594 +G+GGPVG+GKTAL+ ALC+ LRD+ SLA +TNDI+T ED +FL R+ LP++RI AV+TGGCPH AIR+DI+ NL +++L + DL+L ESGGDNL A FS L D I++++V+GGDK+PRKGGPG+T +DLL Sbjct: 33 IGVGGPVGSGKTALVAALCRQLRDELSLAVLTNDIYTTEDADFLRRHAVLPDDRIAAVQTGGCPHTAIRDDITANLDAIDDLVAGHDHLDLILVESGGDNLTATFSSGLVDVQIFVVDVAGGDKVPRKGGPGVTFSDLL 171 HSP 2 Score: 27.7202 bits (60), Expect = 2.753e-45 Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 3 Query: 597 IGADLAVMERDALRMRDGGPFI 662 +GADL VM RD+ ++R PF+ Sbjct: 182 VGADLDVMRRDSTKVRGERPFV 203
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_MYCSK (Urease accessory protein ureG OS=Mycobacterium sp. (strain KMS) GN=ureG PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 2.753e-45 Identity = 82/139 (58.99%), Postives = 110/139 (79.14%), Query Frame = 1 Query: 181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594 +G+GGPVG+GKTAL+ ALC+ LRD+ SLA +TNDI+T ED +FL R+ LP++RI AV+TGGCPH AIR+DI+ NL +++L + DL+L ESGGDNL A FS L D I++++V+GGDK+PRKGGPG+T +DLL Sbjct: 33 IGVGGPVGSGKTALVAALCRQLRDELSLAVLTNDIYTTEDADFLRRHAVLPDDRIAAVQTGGCPHTAIRDDITANLDAIDDLVAGHDHLDLILVESGGDNLTATFSSGLVDVQIFVVDVAGGDKVPRKGGPGVTFSDLL 171 HSP 2 Score: 27.7202 bits (60), Expect = 2.753e-45 Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 3 Query: 597 IGADLAVMERDALRMRDGGPFI 662 +GADL VM RD+ ++R PF+ Sbjct: 182 VGADLDVMRRDSTKVRGERPFV 203
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_MYCSJ (Urease accessory protein ureG OS=Mycobacterium sp. (strain JLS) GN=ureG PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 2.753e-45 Identity = 82/139 (58.99%), Postives = 110/139 (79.14%), Query Frame = 1 Query: 181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594 +G+GGPVG+GKTAL+ ALC+ LRD+ SLA +TNDI+T ED +FL R+ LP++RI AV+TGGCPH AIR+DI+ NL +++L + DL+L ESGGDNL A FS L D I++++V+GGDK+PRKGGPG+T +DLL Sbjct: 33 IGVGGPVGSGKTALVAALCRQLRDELSLAVLTNDIYTTEDADFLRRHAVLPDDRIAAVQTGGCPHTAIRDDITANLDAIDDLVAGHDHLDLILVESGGDNLTATFSSGLVDVQIFVVDVAGGDKVPRKGGPGVTFSDLL 171 HSP 2 Score: 27.7202 bits (60), Expect = 2.753e-45 Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 3 Query: 597 IGADLAVMERDALRMRDGGPFI 662 +GADL VM RD+ ++R PF+ Sbjct: 182 VGADLDVMRRDSTKVRGERPFV 203 The following BLAST results are available for this feature:
BLAST of CK936512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 253
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936512 ID=CK936512; Name=CK936512; organism=Citrus sinensis; type=EST; length=740bpback to top |