CK936512

Overview
NameCK936512
Unique NameCK936512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHOSR (Urease accessory protein ureG OS=Rhodococcus sp. (strain RHA1) GN=ureG PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 9.545e-46
Identity = 83/139 (59.71%), Postives = 110/139 (79.14%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +GIGGPVG+GKTAL+ ALC+ LR++ SLA +TNDI+T ED +FL R+  LP+ERI AV+TGGCPH AIR+DI+ NL  +++L +     DL+L ESGGDNL A FS  L D  I++++V+GGDK+PRKGGPG+T +DLL
Sbjct:   30 IGIGGPVGSGKTALVAALCRQLREELSLAVLTNDIYTTEDADFLRRHAVLPDERIAAVQTGGCPHTAIRDDITANLDAIDDLIAANPPLDLILVESGGDNLTATFSSGLIDVQIFVVDVAGGDKVPRKGGPGVTFSDLL 168          

HSP 2 Score: 30.8018 bits (68), Expect = 9.545e-46
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGP 656
            +GADL VM RDA R+R+G P
Sbjct:  179 VGADLGVMRRDAERVREGRP 198          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHOOB (Urease accessory protein ureG OS=Rhodococcus opacus (strain B4) GN=ureG PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 9.545e-46
Identity = 83/139 (59.71%), Postives = 110/139 (79.14%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +GIGGPVG+GKTAL+ ALC+ LR++ SLA +TNDI+T ED +FL R+  LP+ERI AV+TGGCPH AIR+DI+ NL  +++L +     DL+L ESGGDNL A FS  L D  I++++V+GGDK+PRKGGPG+T +DLL
Sbjct:   30 IGIGGPVGSGKTALVAALCRQLREELSLAVLTNDIYTTEDADFLRRHAVLPDERIAAVQTGGCPHTAIRDDITANLDAIDDLIAANPPLDLILVESGGDNLTATFSSGLIDVQIFVVDVAGGDKVPRKGGPGVTFSDLL 168          

HSP 2 Score: 30.8018 bits (68), Expect = 9.545e-46
Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGP 656
            +GADLAVM RDA ++R+G P
Sbjct:  179 VGADLAVMRRDAEQVREGRP 198          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_STRAW (Urease accessory protein ureG OS=Streptomyces avermitilis GN=ureG PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.157e-45
Identity = 96/180 (53.33%), Postives = 122/180 (67.78%), Query Frame = 1
Query:   67 HSHDG---LAPHSHEPIYSPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSN-LFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            H+HDG   ++  +H P                 +   RA  +G+GGPVG+GKTA + ALC+ LRD +SLA VTNDI+T+ED EFL+R   LP ERI AVETG CPH AIR+DIS NL  +E+L + +   DL+L ESGGDNL A FS+ L D  I++I+V+GGD IPRKGGPG+T ADLL
Sbjct:    7 HTHDGPSAVSADAHRP-----------------DGTRRALRIGLGGPVGSGKTATVAALCRALRDAFSLAVVTNDIYTREDAEFLLREAVLPPERITAVETGACPHTAIRDDISANLEAVEDLEDEVGPLDLVLVESGGDNLTATFSKGLVDAQIFVIDVAGGDDIPRKGGPGVTTADLL 169          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_RHOFD (Urease accessory protein ureG OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=ureG PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.621e-45
Identity = 86/138 (62.32%), Postives = 107/138 (77.54%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEE-LSNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADL 591
            VGIGGPVG+GKT L+  LCK +R++Y L A+TNDI+TKED   L  +GALP +RI  VETGGCPH AIRED SINL  ++  L +   AD++  ESGGDNLAA FS EL+D  IY+I+V+ G+KIPRKGGPGIT++DL
Sbjct:   20 VGIGGPVGSGKTTLLEMLCKGMRERYDLVAITNDIYTKEDQRLLTESGALPADRIMGVETGGCPHTAIREDASINLEAIDRMLVDFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAAGEKIPRKGGPGITKSDL 157          

HSP 2 Score: 26.9498 bits (58), Expect = 1.621e-45
Identity = 16/43 (37.21%), Postives = 22/43 (51.16%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDG----GPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM  D  RMR       PF+   +K   GV+E++  I
Sbjct:  169 VGASLDVMAADTTRMRTTVKGLKPFVMTNLKTLSGVQEVMAFI 211          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_BACPA (Urease accessory protein ureG OS=Bacillus pasteurii GN=ureG PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.623e-45
Identity = 79/139 (56.83%), Postives = 104/139 (74.82%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +GIGGPVG+GKT L+  L + L+++YS+A +TNDI+T+ED  FL+    L ++RI  VETGGCPH AIRED S+N   +EEL N F   +++L ESGGDNL+A FS EL D  IY+I+VS G  IPRKGGPG+T++D L
Sbjct:    6 LGIGGPVGSGKTTLVKTLSEALKEEYSIAVITNDIYTREDANFLINENILEKDRIIGVETGGCPHTAIREDASMNFEAIEELKNRFDDLEIILLESGGDNLSATFSPELVDAFIYVIDVSEGGDIPRKGGPGVTRSDFL 144          

HSP 2 Score: 38.1206 bits (87), Expect = 1.623e-45
Identity = 15/36 (41.67%), Postives = 24/36 (66.67%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIV 704
            +G DL  M+ D ++ R+G PF FA +K   G++EI+
Sbjct:  155 VGVDLDTMKNDTIKARNGRPFTFANIKTKKGLDEII 190          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG1_STRGG (Urease accessory protein ureG 1 OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=ureG1 PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.973e-45
Identity = 88/143 (61.54%), Postives = 113/143 (79.02%), Query Frame = 1
Query:  169 RAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSN-LFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            RA  +G+GGPVG+GKTA + ALC+ LRD+ S+A VTNDI+T+ED +FL++N  LP ERI+AVETG CPH AIR+DIS NL  +E+L + +   DL+L ESGGDNL A FS+ L D  I++I+V+GGD IPRKGGPG+T ADLL
Sbjct:   34 RALRIGLGGPVGSGKTATVAALCRELRDRLSIAVVTNDIYTREDADFLLKNAVLPPERIQAVETGACPHTAIRDDISANLEAVEDLEDAVGPLDLILVESGGDNLTATFSKGLVDAQIFVIDVAGGDDIPRKGGPGVTTADLL 176          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_MESSB (Urease accessory protein ureG OS=Mesorhizobium sp. (strain BNC1) GN=ureG PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.116e-45
Identity = 84/139 (60.43%), Postives = 105/139 (75.54%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +GIGGPVG+GKT L   L K +RD+YS+A VTNDI+TKED   L R  A+ E+RI  VETGGCPH AIRED S+NL  +  L+  F   D++L ESGGDNLAA FS +LAD  +Y+I+V+ G+KIPRKGGP IT++DLL
Sbjct:   10 IGIGGPVGSGKTTLCEVLLKSMRDRYSMAVVTNDIYTKEDALILARLQAISEDRIVGVETGGCPHTAIREDASLNLAAIAHLNRRFPDLDIILIESGGDNLAATFSPDLADLTLYVISVAQGEKIPRKGGPAITRSDLL 148          

HSP 2 Score: 33.4982 bits (75), Expect = 2.116e-45
Identity = 14/39 (35.90%), Postives = 23/39 (58.97%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA+L VM  D  ++R+G P++   +    G EE+V  I
Sbjct:  159 VGANLDVMRSDTEKVREGRPYVMTDLSRRQGAEEVVAFI 197          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_MYCSS (Urease accessory protein ureG OS=Mycobacterium sp. (strain MCS) GN=ureG PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 2.753e-45
Identity = 82/139 (58.99%), Postives = 110/139 (79.14%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+GGPVG+GKTAL+ ALC+ LRD+ SLA +TNDI+T ED +FL R+  LP++RI AV+TGGCPH AIR+DI+ NL  +++L +     DL+L ESGGDNL A FS  L D  I++++V+GGDK+PRKGGPG+T +DLL
Sbjct:   33 IGVGGPVGSGKTALVAALCRQLRDELSLAVLTNDIYTTEDADFLRRHAVLPDDRIAAVQTGGCPHTAIRDDITANLDAIDDLVAGHDHLDLILVESGGDNLTATFSSGLVDVQIFVVDVAGGDKVPRKGGPGVTFSDLL 171          

HSP 2 Score: 27.7202 bits (60), Expect = 2.753e-45
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFI 662
            +GADL VM RD+ ++R   PF+
Sbjct:  182 VGADLDVMRRDSTKVRGERPFV 203          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_MYCSK (Urease accessory protein ureG OS=Mycobacterium sp. (strain KMS) GN=ureG PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 2.753e-45
Identity = 82/139 (58.99%), Postives = 110/139 (79.14%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+GGPVG+GKTAL+ ALC+ LRD+ SLA +TNDI+T ED +FL R+  LP++RI AV+TGGCPH AIR+DI+ NL  +++L +     DL+L ESGGDNL A FS  L D  I++++V+GGDK+PRKGGPG+T +DLL
Sbjct:   33 IGVGGPVGSGKTALVAALCRQLRDELSLAVLTNDIYTTEDADFLRRHAVLPDDRIAAVQTGGCPHTAIRDDITANLDAIDDLVAGHDHLDLILVESGGDNLTATFSSGLVDVQIFVVDVAGGDKVPRKGGPGVTFSDLL 171          

HSP 2 Score: 27.7202 bits (60), Expect = 2.753e-45
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFI 662
            +GADL VM RD+ ++R   PF+
Sbjct:  182 VGADLDVMRRDSTKVRGERPFV 203          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_MYCSJ (Urease accessory protein ureG OS=Mycobacterium sp. (strain JLS) GN=ureG PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 2.753e-45
Identity = 82/139 (58.99%), Postives = 110/139 (79.14%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            +G+GGPVG+GKTAL+ ALC+ LRD+ SLA +TNDI+T ED +FL R+  LP++RI AV+TGGCPH AIR+DI+ NL  +++L +     DL+L ESGGDNL A FS  L D  I++++V+GGDK+PRKGGPG+T +DLL
Sbjct:   33 IGVGGPVGSGKTALVAALCRQLRDELSLAVLTNDIYTTEDADFLRRHAVLPDDRIAAVQTGGCPHTAIRDDITANLDAIDDLVAGHDHLDLILVESGGDNLTATFSSGLVDVQIFVVDVAGGDKVPRKGGPGVTFSDLL 171          

HSP 2 Score: 27.7202 bits (60), Expect = 2.753e-45
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFI 662
            +GADL VM RD+ ++R   PF+
Sbjct:  182 VGADLDVMRRDSTKVRGERPFV 203          
The following BLAST results are available for this feature:
BLAST of CK936512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UREG_RHOSR9.545e-4659.71Urease accessory protein ureG OS=Rhodococcus sp. (... [more]
UREG_RHOOB9.545e-4659.71Urease accessory protein ureG OS=Rhodococcus opacu... [more]
UREG_STRAW1.157e-4553.33Urease accessory protein ureG OS=Streptomyces aver... [more]
UREG_RHOFD1.621e-4562.32Urease accessory protein ureG OS=Rhodoferax ferrir... [more]
UREG_BACPA1.623e-4556.83Urease accessory protein ureG OS=Bacillus pasteuri... [more]
UREG1_STRGG1.973e-4561.54Urease accessory protein ureG 1 OS=Streptomyces gr... [more]
UREG_MESSB2.116e-4560.43Urease accessory protein ureG OS=Mesorhizobium sp.... [more]
UREG_MYCSS2.753e-4558.99Urease accessory protein ureG OS=Mycobacterium sp.... [more]
UREG_MYCSK2.753e-4558.99Urease accessory protein ureG OS=Mycobacterium sp.... [more]
UREG_MYCSJ2.753e-4558.99Urease accessory protein ureG OS=Mycobacterium sp.... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936512 ID=CK936512; Name=CK936512; organism=Citrus sinensis; type=EST; length=740bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGATGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGTTCAAAGCAGACCTA
CTTCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAAACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGACCTTCTGCAATAG
GAGCTGACTTAGCAGTAATGGAGCGTGATGCACTCCGGATGCGTGATGGA
GGGCCTTTTATCTTCGCTCAGGTCAAGCATGGGCTTGGTGTGGAGGAAAT
AGTGAATCACATTTTACAGGCTTGGGAAGCANNNNCAGGG
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